RNA–Protein interactions for RNA: ENST00000504884.6

SNCAIP-207, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 1,885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-207ENST00000504884 ADCY9O60503 1353 aa19.05■□□□□ 0.64
SNCAIP-207ENST00000504884 ALDH1L1O75891 902 aa19.05■□□□□ 0.64
SNCAIP-207ENST00000504884 DDX21Q9NR30 783 aaKnown RBP eCLIP19.05■□□□□ 0.64
SNCAIP-207ENST00000504884 HDAC5Q9UQL6 1122 aa19.05■□□□□ 0.64
SNCAIP-207ENST00000504884 KDM6AO15550 1401 aaPredicted RBP19.04■□□□□ 0.64
SNCAIP-207ENST00000504884 ZNF335Q9H4Z2 1342 aaPredicted RBP19.04■□□□□ 0.64
SNCAIP-207ENST00000504884 RAB11FIP3O75154 756 aa19.04■□□□□ 0.64
SNCAIP-207ENST00000504884 HSCBQ8IWL3 235 aa19.04■□□□□ 0.64
SNCAIP-207ENST00000504884 DDX58O95786 925 aaKnown RBP19.03■□□□□ 0.64
SNCAIP-207ENST00000504884 POLA2Q14181 598 aa19.03■□□□□ 0.64
SNCAIP-207ENST00000504884 PPP1R42Q7Z4L9 355 aa19.03■□□□□ 0.64
SNCAIP-207ENST00000504884 ANTXR1Q9H6X2 564 aa19.03■□□□□ 0.64
SNCAIP-207ENST00000504884 SCN11AQ9UI33 1791 aa19.03■□□□□ 0.64
SNCAIP-207ENST00000504884 PRAMEF22A3QJZ6 481 aa19.03■□□□□ 0.64
SNCAIP-207ENST00000504884 NBPF7P0C2Y1 421 aaPredicted RBP19.03■□□□□ 0.64
SNCAIP-207ENST00000504884 SLKQ9H2G2 1235 aaPredicted RBP19.03■□□□□ 0.64
SNCAIP-207ENST00000504884 MAP3K2Q9Y2U5 619 aa19.03■□□□□ 0.64
SNCAIP-207ENST00000504884 CYP27B1O15528 508 aa19.02■□□□□ 0.64
SNCAIP-207ENST00000504884 SLC39A6Q13433 755 aa19.02■□□□□ 0.64
SNCAIP-207ENST00000504884 PROSER3Q2NL68 480 aa19.02■□□□□ 0.64
SNCAIP-207ENST00000504884 PRDM11Q9NQV5 511 aa19.02■□□□□ 0.64
SNCAIP-207ENST00000504884 SALL3Q9BXA9 1300 aa19.02■□□□□ 0.63
SNCAIP-207ENST00000504884 DEKP35659 375 aaKnown RBP19.01■□□□□ 0.63
SNCAIP-207ENST00000504884 KIF2CQ99661 725 aa19.01■□□□□ 0.63
SNCAIP-207ENST00000504884 STAP2Q9UGK3 403 aa19.01■□□□□ 0.63
SNCAIP-207ENST00000504884 WDR17Q8IZU2 1322 aa19■□□□□ 0.63
SNCAIP-207ENST00000504884 SRGAP3O43295 1099 aa19■□□□□ 0.63
SNCAIP-207ENST00000504884 SURF6O75683 361 aaKnown RBP19■□□□□ 0.63
SNCAIP-207ENST00000504884 MX1P20591 662 aa19■□□□□ 0.63
SNCAIP-207ENST00000504884 PDIA6Q15084 440 aa19■□□□□ 0.63
SNCAIP-207ENST00000504884 HSP90AB4PQ58FF6 505 aa18.99■□□□□ 0.63
SNCAIP-207ENST00000504884 TTC5Q8N0Z6 440 aa18.99■□□□□ 0.63
SNCAIP-207ENST00000504884 C9orf78Q9NZ63 289 aaPredicted RBP18.99■□□□□ 0.63
SNCAIP-207ENST00000504884 SNRPA1P09661 255 aaKnown RBP18.99■□□□□ 0.63
SNCAIP-207ENST00000504884 LINS1Q8NG48 757 aa18.99■□□□□ 0.63
SNCAIP-207ENST00000504884 USP26Q9BXU7 913 aa18.99■□□□□ 0.63
SNCAIP-207ENST00000504884 CABP4P57796 275 aa18.98■□□□□ 0.63
SNCAIP-207ENST00000504884 MTX1Q13505 466 aa18.98■□□□□ 0.63
SNCAIP-207ENST00000504884 TOM1L2Q6ZVM7 507 aa18.98■□□□□ 0.63
SNCAIP-207ENST00000504884 ZNF496Q96IT1 587 aaPredicted RBP18.98■□□□□ 0.63
SNCAIP-207ENST00000504884 REC8O95072 547 aa18.97■□□□□ 0.63
SNCAIP-207ENST00000504884 FMNL2Q96PY5 1086 aa18.97■□□□□ 0.63
SNCAIP-207ENST00000504884 AOX1Q06278 1338 aa18.97■□□□□ 0.63
SNCAIP-207ENST00000504884 PKD1L3Q7Z443 1732 aa18.97■□□□□ 0.63
SNCAIP-207ENST00000504884 MRC1P22897 1456 aa18.97■□□□□ 0.63
SNCAIP-207ENST00000504884 FRAT2O75474 233 aaPredicted RBP18.97■□□□□ 0.63
SNCAIP-207ENST00000504884 KIF1BPQ96EK5 621 aa18.97■□□□□ 0.63
SNCAIP-207ENST00000504884 AIMP1Q12904 312 aaKnown RBP18.96■□□□□ 0.63
SNCAIP-207ENST00000504884 LARP1Q6PKG0 1096 aaKnown RBP18.96■□□□□ 0.63
SNCAIP-207ENST00000504884 ZCRB1Q8TBF4 217 aaKnown RBP18.96■□□□□ 0.63
SNCAIP-207ENST00000504884 RHPN1Q8TCX5 695 aa18.96■□□□□ 0.63
SNCAIP-207ENST00000504884 ERC2O15083 957 aa18.95■□□□□ 0.62
SNCAIP-207ENST00000504884 RIC3Q7Z5B4 369 aa18.95■□□□□ 0.62
SNCAIP-207ENST00000504884 CHMP5Q9NZZ3 219 aa18.95■□□□□ 0.62
SNCAIP-207ENST00000504884 SPRYD3Q8NCJ5 442 aa18.94■□□□□ 0.62
SNCAIP-207ENST00000504884 CARD10Q9BWT7 1032 aa18.94■□□□□ 0.62
SNCAIP-207ENST00000504884 UTYO14607 1347 aa18.94■□□□□ 0.62
SNCAIP-207ENST00000504884 GRM8O00222 908 aa18.94■□□□□ 0.62
SNCAIP-207ENST00000504884 CWF19L2Q2TBE0 894 aaKnown RBP18.94■□□□□ 0.62
SNCAIP-207ENST00000504884 PCDH11XQ9BZA7 1347 aa18.94■□□□□ 0.62
SNCAIP-207ENST00000504884 PCDH11YQ9BZA8 1340 aa18.94■□□□□ 0.62
SNCAIP-207ENST00000504884 MYL6BP14649 208 aa18.93■□□□□ 0.62
SNCAIP-207ENST00000504884 NEXNQ0ZGT2 675 aa18.93■□□□□ 0.62
SNCAIP-207ENST00000504884 RABEP1Q15276 862 aa18.93■□□□□ 0.62
SNCAIP-207ENST00000504884 IL1RAPL2Q9NP60 686 aa18.93■□□□□ 0.62
SNCAIP-207ENST00000504884 USP16Q9Y5T5 823 aa18.93■□□□□ 0.62
SNCAIP-207ENST00000504884 COL5A2P05997 1499 aaPredicted RBP18.93■□□□□ 0.62
SNCAIP-207ENST00000504884 XAGE3Q8WTP9 111 aa18.92■□□□□ 0.62
SNCAIP-207ENST00000504884 ERVV-2B6SEH9 535 aa18.92■□□□□ 0.62
SNCAIP-207ENST00000504884 IL2RBP14784 551 aa18.92■□□□□ 0.62
SNCAIP-207ENST00000504884 EVA1CP58658 441 aa18.92■□□□□ 0.62
SNCAIP-207ENST00000504884 TSHZ3Q63HK5 1081 aa18.92■□□□□ 0.62
SNCAIP-207ENST00000504884 COPS6Q7L5N1 327 aa18.92■□□□□ 0.62
SNCAIP-207ENST00000504884 TRIM6-TRIM34B2RNG4 842 aa18.91■□□□□ 0.62
SNCAIP-207ENST00000504884 NKX1-1Q15270 411 aaPredicted RBP18.91■□□□□ 0.62
SNCAIP-207ENST00000504884 ANKRD13DQ6ZTN6 518 aa18.9■□□□□ 0.62
SNCAIP-207ENST00000504884 RILPL2Q969X0 211 aa18.9■□□□□ 0.62
SNCAIP-207ENST00000504884 METTL22Q9BUU2 404 aaPredicted RBP18.9■□□□□ 0.62
SNCAIP-207ENST00000504884 PARP4Q9UKK3 1724 aaKnown RBP18.9■□□□□ 0.62
SNCAIP-207ENST00000504884 K7ELQ4 463 aaPredicted RBP18.9■□□□□ 0.62
SNCAIP-207ENST00000504884 LRP10Q7Z4F1 713 aa18.9■□□□□ 0.62
SNCAIP-207ENST00000504884 NUTM1Q86Y26 1132 aa18.9■□□□□ 0.62
SNCAIP-207ENST00000504884 ERC1Q8IUD2 1116 aa18.9■□□□□ 0.62
SNCAIP-207ENST00000504884 RBM42Q9BTD8 480 aaKnown RBP18.9■□□□□ 0.62
SNCAIP-207ENST00000504884 C5P01031 1676 aa18.89■□□□□ 0.61
SNCAIP-207ENST00000504884 IGKV5-2P06315 115 aa18.89■□□□□ 0.61
SNCAIP-207ENST00000504884 OS9Q13438 667 aaPredicted RBP18.89■□□□□ 0.61
SNCAIP-207ENST00000504884 NEURL1BA8MQ27 555 aa18.88■□□□□ 0.61
SNCAIP-207ENST00000504884 CHMLP26374 656 aa18.88■□□□□ 0.61
SNCAIP-207ENST00000504884 ESYT1Q9BSJ8 1104 aa18.88■□□□□ 0.61
SNCAIP-207ENST00000504884 CLASRPQ8N2M8 674 aaKnown RBP18.88■□□□□ 0.61
SNCAIP-207ENST00000504884 SUCLG2Q96I99 432 aa18.88■□□□□ 0.61
SNCAIP-207ENST00000504884 STRN4Q9NRL3 753 aa18.88■□□□□ 0.61
SNCAIP-207ENST00000504884 CIZ1Q9ULV3 898 aaPredicted RBP18.88■□□□□ 0.61
SNCAIP-207ENST00000504884 ERBB4Q15303 1308 aa18.87■□□□□ 0.61
SNCAIP-207ENST00000504884 DDIT3P35638 169 aa18.87■□□□□ 0.61
SNCAIP-207ENST00000504884 GCKRQ14397 625 aa18.87■□□□□ 0.61
SNCAIP-207ENST00000504884 KAZALD1Q96I82 304 aa18.87■□□□□ 0.61
SNCAIP-207ENST00000504884 CD2BP2O95400 341 aaKnown RBP18.86■□□□□ 0.61
SNCAIP-207ENST00000504884 PI4K2BQ8TCG2 481 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms