RNA–Protein interactions for RNA: ENST00000504835.1

CDH6-202, Transcript of cadherin 6, humanhuman

TSL 5

Gene CDH6, Length 1,568 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6-202ENST00000504835 ADGRD1Q6QNK2 874 aa11.99□□□□□ -0.49
CDH6-202ENST00000504835 COG3Q96JB2 828 aa11.99□□□□□ -0.49
CDH6-202ENST00000504835 MAP2P11137 1827 aaKnown RBP11.98□□□□□ -0.49
CDH6-202ENST00000504835 RTL1A6NKG5 1358 aa11.98□□□□□ -0.49
CDH6-202ENST00000504835 UBR3Q6ZT12 1888 aa11.98□□□□□ -0.49
CDH6-202ENST00000504835 AMPHP49418 695 aa11.97□□□□□ -0.49
CDH6-202ENST00000504835 RRS1Q15050 365 aaKnown RBP11.97□□□□□ -0.49
CDH6-202ENST00000504835 NBPF6Q5VWK0 638 aa11.97□□□□□ -0.49
CDH6-202ENST00000504835 ZCRB1Q8TBF4 217 aaKnown RBP11.97□□□□□ -0.49
CDH6-202ENST00000504835 SLC16A10Q8TF71 515 aa11.97□□□□□ -0.49
CDH6-202ENST00000504835 SYTL4Q96C24 671 aaPredicted RBP11.97□□□□□ -0.49
CDH6-202ENST00000504835 NBPF4Q96M43 638 aa11.97□□□□□ -0.49
CDH6-202ENST00000504835 USHBP1Q8N6Y0 703 aa11.96□□□□□ -0.49
CDH6-202ENST00000504835 FYB1O15117 783 aa11.96□□□□□ -0.5
CDH6-202ENST00000504835 NLGN2Q8NFZ4 835 aa11.96□□□□□ -0.5
CDH6-202ENST00000504835 GGNBP2Q9H3C7 697 aa11.96□□□□□ -0.5
CDH6-202ENST00000504835 C4BP0C0L5 1744 aa11.95□□□□□ -0.5
CDH6-202ENST00000504835 TFCP2L1Q9NZI6 479 aa11.95□□□□□ -0.5
CDH6-202ENST00000504835 TK2O00142 265 aa11.94□□□□□ -0.5
CDH6-202ENST00000504835 CCNL1Q9UK58 526 aaPredicted RBP11.94□□□□□ -0.5
CDH6-202ENST00000504835 POLD1P28340 1107 aa11.93□□□□□ -0.5
CDH6-202ENST00000504835 GPR162Q16538 588 aa11.93□□□□□ -0.5
CDH6-202ENST00000504835 COL23A1Q86Y22 540 aaPredicted RBP11.93□□□□□ -0.5
CDH6-202ENST00000504835 INSRP06213 1382 aa11.93□□□□□ -0.5
CDH6-202ENST00000504835 USP47Q96K76 1375 aa11.93□□□□□ -0.5
CDH6-202ENST00000504835 HSP90AB2PQ58FF8 381 aa11.92□□□□□ -0.5
CDH6-202ENST00000504835 CEP350Q5VT06 3117 aa11.92□□□□□ -0.5
CDH6-202ENST00000504835 NCAPD2Q15021 1401 aa11.92□□□□□ -0.5
CDH6-202ENST00000504835 CGNL1Q0VF96 1302 aa11.91□□□□□ -0.5
CDH6-202ENST00000504835 YBX3P16989 372 aaKnown RBP eCLIP11.91□□□□□ -0.5
CDH6-202ENST00000504835 C1QTNF8P60827 252 aa11.91□□□□□ -0.5
CDH6-202ENST00000504835 SMG6Q86US8 1419 aaKnown RBP11.91□□□□□ -0.5
CDH6-202ENST00000504835 FLT4P35916 1363 aa11.91□□□□□ -0.5
CDH6-202ENST00000504835 CYP27B1O15528 508 aa11.9□□□□□ -0.5
CDH6-202ENST00000504835 TMF1P82094 1093 aa11.9□□□□□ -0.5
CDH6-202ENST00000504835 MSL1Q68DK7 614 aa11.9□□□□□ -0.5
CDH6-202ENST00000504835 CARD14Q9BXL6 1004 aa11.9□□□□□ -0.5
CDH6-202ENST00000504835 TATP17735 454 aaPredicted RBP11.89□□□□□ -0.51
CDH6-202ENST00000504835 AMIGO3Q86WK7 504 aa11.89□□□□□ -0.51
CDH6-202ENST00000504835 RAPGEF4Q8WZA2 1011 aa11.89□□□□□ -0.51
CDH6-202ENST00000504835 KIF24Q5T7B8 1368 aa11.89□□□□□ -0.51
CDH6-202ENST00000504835 PALLDQ8WX93 1383 aa11.89□□□□□ -0.51
CDH6-202ENST00000504835 KIAA1551Q9HCM1 1747 aa11.89□□□□□ -0.51
CDH6-202ENST00000504835 PCDH11XQ9BZA7 1347 aa11.89□□□□□ -0.51
CDH6-202ENST00000504835 PCDH11YQ9BZA8 1340 aa11.89□□□□□ -0.51
CDH6-202ENST00000504835 SENP3-EIF4A1A0A087X0R7 540 aa11.88□□□□□ -0.51
CDH6-202ENST00000504835 EMILIN1Q9Y6C2 1016 aa11.88□□□□□ -0.51
CDH6-202ENST00000504835 KIF13BQ9NQT8 1826 aa11.88□□□□□ -0.51
CDH6-202ENST00000504835 NSD3Q9BZ95 1437 aa11.88□□□□□ -0.51
CDH6-202ENST00000504835 ECM2O94769 699 aaPredicted RBP11.88□□□□□ -0.51
CDH6-202ENST00000504835 MPRIPQ6WCQ1 1025 aa11.87□□□□□ -0.51
CDH6-202ENST00000504835 SMIM5Q71RC9 77 aa11.87□□□□□ -0.51
CDH6-202ENST00000504835 COL5A3P25940 1745 aaPredicted RBP11.87□□□□□ -0.51
CDH6-202ENST00000504835 HRO43593 1189 aa11.86□□□□□ -0.51
CDH6-202ENST00000504835 PPP4R3BQ5MIZ7 849 aa11.86□□□□□ -0.51
CDH6-202ENST00000504835 PTCD2Q8WV60 388 aaKnown RBP11.86□□□□□ -0.51
CDH6-202ENST00000504835 N4BP2Q86UW6 1770 aaPredicted RBP11.86□□□□□ -0.51
CDH6-202ENST00000504835 PIGBQ92521 554 aa11.85□□□□□ -0.51
CDH6-202ENST00000504835 ZNF831Q5JPB2 1677 aa11.85□□□□□ -0.51
CDH6-202ENST00000504835 BRCA1P38398 1863 aaKnown RBP11.85□□□□□ -0.51
CDH6-202ENST00000504835 GIGYF1O75420 1035 aaPredicted RBP11.84□□□□□ -0.51
CDH6-202ENST00000504835 NKX1-1Q15270 411 aaPredicted RBP11.84□□□□□ -0.51
CDH6-202ENST00000504835 VIRMAQ69YN4 1812 aaKnown RBP11.84□□□□□ -0.51
CDH6-202ENST00000504835 MYH14Q7Z406 1995 aaKnown RBP11.84□□□□□ -0.51
CDH6-202ENST00000504835 ATP10DQ9P241 1426 aa11.84□□□□□ -0.51
CDH6-202ENST00000504835 CD2APQ9Y5K6 639 aa11.84□□□□□ -0.51
CDH6-202ENST00000504835 ADCY9O60503 1353 aa11.83□□□□□ -0.52
CDH6-202ENST00000504835 C4AP0C0L4 1744 aa11.83□□□□□ -0.52
CDH6-202ENST00000504835 GRIN3BO60391 1043 aa11.83□□□□□ -0.52
CDH6-202ENST00000504835 PSEN2P49810 448 aa11.83□□□□□ -0.52
CDH6-202ENST00000504835 DMRTA1Q5VZB9 504 aa11.83□□□□□ -0.52
CDH6-202ENST00000504835 LINC00116Q8NCU8 138 aa11.83□□□□□ -0.52
CDH6-202ENST00000504835 KCTD12Q96CX2 325 aaKnown RBP11.83□□□□□ -0.52
CDH6-202ENST00000504835 EYA1Q99502 592 aa11.83□□□□□ -0.52
CDH6-202ENST00000504835 WASHC2AQ641Q2 1341 aa11.82□□□□□ -0.52
CDH6-202ENST00000504835 CICQ96RK0 1608 aaPredicted RBP11.82□□□□□ -0.52
CDH6-202ENST00000504835 TBC1D12O60347 775 aa11.82□□□□□ -0.52
CDH6-202ENST00000504835 CDCA8Q53HL2 280 aa11.82□□□□□ -0.52
CDH6-202ENST00000504835 FLAD1Q8NFF5 587 aa11.82□□□□□ -0.52
CDH6-202ENST00000504835 SMARCC1Q92922 1105 aaPredicted RBP11.82□□□□□ -0.52
CDH6-202ENST00000504835 PHF14O94880 888 aa11.81□□□□□ -0.52
CDH6-202ENST00000504835 ITPK1Q13572 414 aa11.81□□□□□ -0.52
CDH6-202ENST00000504835 AK7Q96M32 723 aa11.81□□□□□ -0.52
CDH6-202ENST00000504835 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.8□□□□□ -0.52
CDH6-202ENST00000504835 LOC102724428A0A0B4J2F2 783 aa11.8□□□□□ -0.52
CDH6-202ENST00000504835 PPM1GO15355 546 aaPredicted RBP11.8□□□□□ -0.52
CDH6-202ENST00000504835 SIK1P57059 783 aa11.8□□□□□ -0.52
CDH6-202ENST00000504835 POLKQ9UBT6 870 aa11.8□□□□□ -0.52
CDH6-202ENST00000504835 ASAP1Q9ULH1 1129 aa11.8□□□□□ -0.52
CDH6-202ENST00000504835 PHKG2P15735 406 aa11.79□□□□□ -0.52
CDH6-202ENST00000504835 FOXK1P85037 733 aa11.79□□□□□ -0.52
CDH6-202ENST00000504835 IGSF1Q8N6C5 1336 aa11.79□□□□□ -0.52
CDH6-202ENST00000504835 KDRP35968 1356 aa11.79□□□□□ -0.52
CDH6-202ENST00000504835 SCN11AQ9UI33 1791 aa11.79□□□□□ -0.52
CDH6-202ENST00000504835 SSFA2P28290 1259 aa11.79□□□□□ -0.52
CDH6-202ENST00000504835 WWC3Q9ULE0 1092 aa11.79□□□□□ -0.52
CDH6-202ENST00000504835 SPG7Q9UQ90 795 aa11.79□□□□□ -0.52
CDH6-202ENST00000504835 TJP1Q07157 1748 aa11.78□□□□□ -0.52
CDH6-202ENST00000504835 ARFGEF1Q9Y6D6 1849 aa11.78□□□□□ -0.52
CDH6-202ENST00000504835 EIF4A2Q14240 407 aaKnown RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms