RNA–Protein interactions for RNA: ENST00000504758.5

TCP11-219, Transcript of t-complex 11, human

TSL 1 (best)

Gene TCP11, Length 1,978 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCP11-219	ENST00000504758	HEG1	Q9ULI3	1381 aa		13.92	□□□□□ -0.18
TCP11-219	ENST00000504758		A0A0G2JLW4	131 aa		13.92	□□□□□ -0.18
TCP11-219	ENST00000504758	FCHSD2	O94868	740 aa		13.92	□□□□□ -0.18
TCP11-219	ENST00000504758	DCTN1	Q14203	1278 aa		13.92	□□□□□ -0.18
TCP11-219	ENST00000504758	USPL1	Q5W0Q7	1092 aa		13.92	□□□□□ -0.18
TCP11-219	ENST00000504758	MCM10	Q7L590	875 aa		13.92	□□□□□ -0.18
TCP11-219	ENST00000504758	TTC5	Q8N0Z6	440 aa		13.92	□□□□□ -0.18
TCP11-219	ENST00000504758	PARP3	Q9Y6F1	533 aa		13.91	□□□□□ -0.18
TCP11-219	ENST00000504758	NRXN2	Q9P2S2	1712 aa		13.91	□□□□□ -0.18
TCP11-219	ENST00000504758	SCN7A	Q01118	1682 aa		13.91	□□□□□ -0.18
TCP11-219	ENST00000504758	CANX	P27824	592 aa	Known RBP	13.91	□□□□□ -0.18
TCP11-219	ENST00000504758	BCL2L12	Q9HB09	334 aa		13.91	□□□□□ -0.18
TCP11-219	ENST00000504758	POLRMT	O00411	1230 aa	Known RBP	13.89	□□□□□ -0.19
TCP11-219	ENST00000504758	DPEP1	P16444	411 aa		13.89	□□□□□ -0.19
TCP11-219	ENST00000504758	TM4SF1	P30408	202 aa		13.89	□□□□□ -0.19
TCP11-219	ENST00000504758	NARF	Q9UHQ1	456 aa		13.89	□□□□□ -0.19
TCP11-219	ENST00000504758	ARFGEF1	Q9Y6D6	1849 aa		13.89	□□□□□ -0.19
TCP11-219	ENST00000504758	PRAMEF22	A3QJZ6	481 aa		13.89	□□□□□ -0.19
TCP11-219	ENST00000504758	BTBD11	A6QL63	1104 aa		13.89	□□□□□ -0.19
TCP11-219	ENST00000504758	ZPR1	O75312	459 aa		13.89	□□□□□ -0.19
TCP11-219	ENST00000504758	KCNA3	P22001	575 aa		13.89	□□□□□ -0.19
TCP11-219	ENST00000504758	EIF5	P55010	431 aa	Known RBP	13.89	□□□□□ -0.19
TCP11-219	ENST00000504758	TGFB2	P61812	414 aa		13.89	□□□□□ -0.19
TCP11-219	ENST00000504758	ADCY9	O60503	1353 aa		13.88	□□□□□ -0.19
TCP11-219	ENST00000504758	STARD3NL	O95772	234 aa		13.88	□□□□□ -0.19
TCP11-219	ENST00000504758	DDX10	Q13206	875 aa	Known RBP	13.88	□□□□□ -0.19
TCP11-219	ENST00000504758	NFIX	Q14938	502 aa		13.88	□□□□□ -0.19
TCP11-219	ENST00000504758	BCOR	Q6W2J9	1755 aa		13.87	□□□□□ -0.19
TCP11-219	ENST00000504758	ATP10D	Q9P241	1426 aa		13.87	□□□□□ -0.19
TCP11-219	ENST00000504758	A1BG	P04217	495 aa		13.87	□□□□□ -0.19
TCP11-219	ENST00000504758	FMNL2	Q96PY5	1086 aa		13.87	□□□□□ -0.19
TCP11-219	ENST00000504758	PLEKHF1	Q96S99	279 aa		13.87	□□□□□ -0.19
TCP11-219	ENST00000504758	KDM3B	Q7LBC6	1761 aa		13.87	□□□□□ -0.19
TCP11-219	ENST00000504758	BCS1L	Q9Y276	419 aa		13.87	□□□□□ -0.19
TCP11-219	ENST00000504758	ANKRD31	Q8N7Z5	1873 aa		13.86	□□□□□ -0.19
TCP11-219	ENST00000504758	DLEC1	Q9Y238	1755 aa		13.86	□□□□□ -0.19
TCP11-219	ENST00000504758	PIP4K2A	P48426	406 aa	Predicted RBP	13.86	□□□□□ -0.19
TCP11-219	ENST00000504758	RTF1	Q92541	710 aa	Known RBP	13.86	□□□□□ -0.19
TCP11-219	ENST00000504758	CHRNA5	P30532	468 aa		13.85	□□□□□ -0.19
TCP11-219	ENST00000504758	ZNF330	Q9Y3S2	320 aa	Predicted RBP	13.85	□□□□□ -0.19
TCP11-219	ENST00000504758	USP16	Q9Y5T5	823 aa		13.85	□□□□□ -0.19
TCP11-219	ENST00000504758	CARMIL3	Q8ND23	1372 aa		13.85	□□□□□ -0.19
TCP11-219	ENST00000504758	LAMB4	A4D0S4	1761 aa		13.85	□□□□□ -0.19
TCP11-219	ENST00000504758	MIS18A	Q9NYP9	233 aa		13.85	□□□□□ -0.19
TCP11-219	ENST00000504758	TBC1D2B	Q9UPU7	963 aa		13.85	□□□□□ -0.19
TCP11-219	ENST00000504758	THUMPD2	Q9BTF0	503 aa	Known RBP	13.84	□□□□□ -0.19
TCP11-219	ENST00000504758	HTATSF1	O43719	755 aa	Known RBP	13.83	□□□□□ -0.19
TCP11-219	ENST00000504758	BICDL1	Q6ZP65	573 aa		13.83	□□□□□ -0.19
TCP11-219	ENST00000504758	TEX13A	Q9BXU3	409 aa	Predicted RBP	13.83	□□□□□ -0.19
TCP11-219	ENST00000504758	COL11A2	P13942	1736 aa	Predicted RBP	13.83	□□□□□ -0.2
TCP11-219	ENST00000504758	IL6ST	P40189	918 aa	Predicted RBP	13.83	□□□□□ -0.2
TCP11-219	ENST00000504758	TBC1D9B	Q66K14	1250 aa		13.83	□□□□□ -0.2
TCP11-219	ENST00000504758	SBF1	O95248	1867 aa		13.82	□□□□□ -0.2
TCP11-219	ENST00000504758	SERPINB2	P05120	415 aa		13.82	□□□□□ -0.2
TCP11-219	ENST00000504758	RALBP1	Q15311	655 aa		13.82	□□□□□ -0.2
TCP11-219	ENST00000504758	NFE2L2	Q16236	605 aa		13.82	□□□□□ -0.2
TCP11-219	ENST00000504758	ZNF526	Q8TF50	670 aa	Predicted RBP	13.82	□□□□□ -0.2
TCP11-219	ENST00000504758	CAMTA2	O94983	1202 aa		13.82	□□□□□ -0.2
TCP11-219	ENST00000504758	TAF7	Q15545	349 aa	Predicted RBP	13.82	□□□□□ -0.2
TCP11-219	ENST00000504758	NBPF26	B4DH59	902 aa		13.81	□□□□□ -0.2
TCP11-219	ENST00000504758	GIGYF1	O75420	1035 aa	Predicted RBP	13.81	□□□□□ -0.2
TCP11-219	ENST00000504758	SNRPA1	P09661	255 aa	Known RBP	13.81	□□□□□ -0.2
TCP11-219	ENST00000504758	C1QTNF8	P60827	252 aa		13.81	□□□□□ -0.2
TCP11-219	ENST00000504758	NBPF10	Q6P3W6	841 aa	Known RBP	13.81	□□□□□ -0.2
TCP11-219	ENST00000504758	NBPF15	Q8N660	670 aa		13.81	□□□□□ -0.2
TCP11-219	ENST00000504758	PIM2	Q9P1W9	311 aa		13.81	□□□□□ -0.2
TCP11-219	ENST00000504758		A0A087WZG4	1122 aa		13.8	□□□□□ -0.2
TCP11-219	ENST00000504758	ARHGAP27	Q6ZUM4	889 aa		13.8	□□□□□ -0.2
TCP11-219	ENST00000504758	CCDC24	Q8N4L8	307 aa		13.8	□□□□□ -0.2
TCP11-219	ENST00000504758	CACNA1S	Q13698	1873 aa		13.79	□□□□□ -0.2
TCP11-219	ENST00000504758	MYBBP1A	Q9BQG0	1328 aa	Known RBP	13.79	□□□□□ -0.2
TCP11-219	ENST00000504758	DALRD3	Q5D0E6	543 aa	Known RBP	13.79	□□□□□ -0.2
TCP11-219	ENST00000504758	DZIP3	Q86Y13	1208 aa	Known RBP	13.79	□□□□□ -0.2
TCP11-219	ENST00000504758	MAPK8IP3	Q9UPT6	1336 aa		13.78	□□□□□ -0.2
TCP11-219	ENST00000504758	NEFM	P07197	916 aa		13.78	□□□□□ -0.2
TCP11-219	ENST00000504758	CCDC88A	Q3V6T2	1871 aa		13.78	□□□□□ -0.2
TCP11-219	ENST00000504758	PRR5L	Q6MZQ0	368 aa		13.78	□□□□□ -0.2
TCP11-219	ENST00000504758	GPBP1L1	Q9HC44	474 aa	Predicted RBP	13.78	□□□□□ -0.2
TCP11-219	ENST00000504758	NUP98	P52948	1817 aa		13.77	□□□□□ -0.21
TCP11-219	ENST00000504758	EIF4A1	P60842	406 aa	Known RBP	13.76	□□□□□ -0.21
TCP11-219	ENST00000504758	CCDC146	Q8IYE0	955 aa		13.76	□□□□□ -0.21
TCP11-219	ENST00000504758	C2CD5	Q86YS7	1000 aa		13.76	□□□□□ -0.21
TCP11-219	ENST00000504758	RRP7A	Q9Y3A4	280 aa	Known RBP	13.76	□□□□□ -0.21
TCP11-219	ENST00000504758	TMPO	P42166	694 aa	Known RBP	13.75	□□□□□ -0.21
TCP11-219	ENST00000504758	C9orf131	Q5VYM1	1079 aa		13.75	□□□□□ -0.21
TCP11-219	ENST00000504758	SLX4	Q8IY92	1834 aa		13.75	□□□□□ -0.21
TCP11-219	ENST00000504758	RIPK4	P57078	832 aa		13.74	□□□□□ -0.21
TCP11-219	ENST00000504758	RASSF7	Q02833	373 aa		13.74	□□□□□ -0.21
TCP11-219	ENST00000504758	NPM2	Q86SE8	214 aa	Known RBP	13.74	□□□□□ -0.21
TCP11-219	ENST00000504758	SETDB2	Q96T68	719 aa		13.74	□□□□□ -0.21
TCP11-219	ENST00000504758	PNN	Q9H307	717 aa	Known RBP	13.74	□□□□□ -0.21
TCP11-219	ENST00000504758	PRKRIP1	Q9H875	184 aa	Predicted RBP	13.74	□□□□□ -0.21
TCP11-219	ENST00000504758	SENP3-EIF4A1	A0A087X0R7	540 aa		13.74	□□□□□ -0.21
TCP11-219	ENST00000504758	PRELP	P51888	382 aa		13.74	□□□□□ -0.21
TCP11-219	ENST00000504758	HLF	Q16534	295 aa		13.74	□□□□□ -0.21
TCP11-219	ENST00000504758	CNBD1	Q8NA66	436 aa		13.74	□□□□□ -0.21
TCP11-219	ENST00000504758	PNISR	Q8TF01	805 aa	Known RBP	13.74	□□□□□ -0.21
TCP11-219	ENST00000504758	ARFGEF2	Q9Y6D5	1785 aa		13.74	□□□□□ -0.21
TCP11-219	ENST00000504758	FER1L6	Q2WGJ9	1857 aa		13.73	□□□□□ -0.21
TCP11-219	ENST00000504758		H0YIN7	160 aa		13.73	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms