RNA–Protein interactions for RNA: ENST00000504431.1

UBE2B-204, Transcript of ubiquitin conjugating enzyme E2 B, humanhuman

TSL 2

Gene UBE2B, Length 235 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2B-204ENST00000504431 CTC1Q2NKJ3 1217 aa11.56□□□□□ -0.56
UBE2B-204ENST00000504431 CDCA8Q53HL2 280 aa11.56□□□□□ -0.56
UBE2B-204ENST00000504431 Q6ZVU0 165 aa11.56□□□□□ -0.56
UBE2B-204ENST00000504431 HOMEZQ8IX15 550 aa11.56□□□□□ -0.56
UBE2B-204ENST00000504431 TEX14Q8IWB6 1497 aa11.56□□□□□ -0.56
UBE2B-204ENST00000504431 CAPN5O15484 640 aaPredicted RBP11.55□□□□□ -0.56
UBE2B-204ENST00000504431 RAPGEF3O95398 923 aa11.55□□□□□ -0.56
UBE2B-204ENST00000504431 GNRH1P01148 92 aa11.55□□□□□ -0.56
UBE2B-204ENST00000504431 CLDN10P78369 228 aa11.55□□□□□ -0.56
UBE2B-204ENST00000504431 ESCO1Q5FWF5 840 aa11.55□□□□□ -0.56
UBE2B-204ENST00000504431 SIX5Q8N196 739 aa11.55□□□□□ -0.56
UBE2B-204ENST00000504431 ZFAND3Q9H8U3 227 aa11.55□□□□□ -0.56
UBE2B-204ENST00000504431 PCDHGA11Q9Y5H2 935 aa11.55□□□□□ -0.56
UBE2B-204ENST00000504431 TIAM1Q13009 1591 aa11.54□□□□□ -0.56
UBE2B-204ENST00000504431 PTK7Q13308 1070 aa11.54□□□□□ -0.56
UBE2B-204ENST00000504431 IRX2Q9BZI1 471 aaPredicted RBP11.54□□□□□ -0.56
UBE2B-204ENST00000504431 NOVA2Q9UNW9 492 aaKnown RBP11.54□□□□□ -0.56
UBE2B-204ENST00000504431 MYO5CQ9NQX4 1742 aa11.54□□□□□ -0.56
UBE2B-204ENST00000504431 PLCH2O75038 1416 aa11.53□□□□□ -0.56
UBE2B-204ENST00000504431 FANCAO15360 1455 aa11.53□□□□□ -0.56
UBE2B-204ENST00000504431 UPP2O95045 317 aa11.53□□□□□ -0.56
UBE2B-204ENST00000504431 CRTC2Q53ET0 693 aaPredicted RBP11.53□□□□□ -0.56
UBE2B-204ENST00000504431 CCDC102BQ68D86 513 aa11.53□□□□□ -0.56
UBE2B-204ENST00000504431 ANKMY2Q8IV38 441 aa11.53□□□□□ -0.56
UBE2B-204ENST00000504431 MEIOBQ8N635 442 aa11.53□□□□□ -0.56
UBE2B-204ENST00000504431 ZNF594Q96JF6 807 aaPredicted RBP11.53□□□□□ -0.56
UBE2B-204ENST00000504431 CDC42BPBQ9Y5S2 1711 aa11.52□□□□□ -0.56
UBE2B-204ENST00000504431 ADD1P35611 737 aaKnown RBP11.52□□□□□ -0.57
UBE2B-204ENST00000504431 FAM200AQ8TCP9 573 aa11.52□□□□□ -0.57
UBE2B-204ENST00000504431 USTQ9Y2C2 406 aa11.52□□□□□ -0.57
UBE2B-204ENST00000504431 CDC42BPAQ5VT25 1732 aa11.52□□□□□ -0.57
UBE2B-204ENST00000504431 AKNAQ7Z591 1439 aa11.52□□□□□ -0.57
UBE2B-204ENST00000504431 ARHGAP5Q13017 1502 aa11.51□□□□□ -0.57
UBE2B-204ENST00000504431 WASLO00401 505 aaPredicted RBP11.51□□□□□ -0.57
UBE2B-204ENST00000504431 SMCPP49901 116 aaPredicted RBP11.51□□□□□ -0.57
UBE2B-204ENST00000504431 CBLBQ13191 982 aa11.51□□□□□ -0.57
UBE2B-204ENST00000504431 TPCN2Q8NHX9 752 aa11.51□□□□□ -0.57
UBE2B-204ENST00000504431 TSEN34Q9BSV6 310 aaKnown RBP11.51□□□□□ -0.57
UBE2B-204ENST00000504431 BACH1O14867 736 aa11.5□□□□□ -0.57
UBE2B-204ENST00000504431 SEC13P55735 322 aa11.5□□□□□ -0.57
UBE2B-204ENST00000504431 EFCAB2Q5VUJ9 269 aa11.5□□□□□ -0.57
UBE2B-204ENST00000504431 ZNF644Q9H582 1327 aaPredicted RBP11.5□□□□□ -0.57
UBE2B-204ENST00000504431 LRRC9Q6ZRR7 1453 aa11.5□□□□□ -0.57
UBE2B-204ENST00000504431 EHBP1L1Q8N3D4 1523 aa11.5□□□□□ -0.57
UBE2B-204ENST00000504431 GPATCH8Q9UKJ3 1502 aaKnown RBP11.5□□□□□ -0.57
UBE2B-204ENST00000504431 ZBTB7BO15156 539 aaPredicted RBP11.49□□□□□ -0.57
UBE2B-204ENST00000504431 PTGIRP43119 386 aa11.49□□□□□ -0.57
UBE2B-204ENST00000504431 GDF10P55107 478 aa11.49□□□□□ -0.57
UBE2B-204ENST00000504431 DPYDQ12882 1025 aa11.49□□□□□ -0.57
UBE2B-204ENST00000504431 CRIPAKQ8N1N5 446 aa11.49□□□□□ -0.57
UBE2B-204ENST00000504431 KIAA1024Q9UPX6 916 aa11.49□□□□□ -0.57
UBE2B-204ENST00000504431 CCNB3Q8WWL7 1395 aa11.49□□□□□ -0.57
UBE2B-204ENST00000504431 NCOA2Q15596 1464 aa11.49□□□□□ -0.57
UBE2B-204ENST00000504431 NEO1Q92859 1461 aa11.49□□□□□ -0.57
UBE2B-204ENST00000504431 M0R2N6 131 aa11.48□□□□□ -0.57
UBE2B-204ENST00000504431 AXIN1O15169 862 aa11.48□□□□□ -0.57
UBE2B-204ENST00000504431 CFDP1Q9UEE9 299 aaPredicted RBP11.48□□□□□ -0.57
UBE2B-204ENST00000504431 SCAPERQ9BY12 1400 aa11.48□□□□□ -0.57
UBE2B-204ENST00000504431 PREX2Q70Z35 1606 aa11.48□□□□□ -0.57
UBE2B-204ENST00000504431 ARAP3Q8WWN8 1544 aa11.47□□□□□ -0.57
UBE2B-204ENST00000504431 ADGRL1O94910 1474 aa11.47□□□□□ -0.57
UBE2B-204ENST00000504431 HNRNPMP52272 730 aaKnown RBP eCLIP11.47□□□□□ -0.57
UBE2B-204ENST00000504431 AFAP1Q8N556 730 aa11.47□□□□□ -0.57
UBE2B-204ENST00000504431 RETREG2Q8NC44 543 aa11.47□□□□□ -0.57
UBE2B-204ENST00000504431 ARHGEF10LQ9HCE6 1279 aa11.47□□□□□ -0.57
UBE2B-204ENST00000504431 SUPT6HQ7KZ85 1726 aaKnown RBP11.46□□□□□ -0.57
UBE2B-204ENST00000504431 INHAP05111 366 aa11.46□□□□□ -0.57
UBE2B-204ENST00000504431 SCNN1DP51172 638 aa11.46□□□□□ -0.57
UBE2B-204ENST00000504431 RELBQ01201 579 aa11.46□□□□□ -0.57
UBE2B-204ENST00000504431 SCARF1Q14162 830 aa11.46□□□□□ -0.57
UBE2B-204ENST00000504431 SWI5Q1ZZU3 235 aa11.46□□□□□ -0.57
UBE2B-204ENST00000504431 LINC00528Q8N1L1 170 aa11.46□□□□□ -0.57
UBE2B-204ENST00000504431 NLRP3Q96P20 1036 aa11.46□□□□□ -0.57
UBE2B-204ENST00000504431 ZMIZ1Q9ULJ6 1067 aa11.46□□□□□ -0.57
UBE2B-204ENST00000504431 FRMPD1Q5SYB0 1578 aa11.45□□□□□ -0.58
UBE2B-204ENST00000504431 ARHGEF12Q9NZN5 1544 aa11.45□□□□□ -0.58
UBE2B-204ENST00000504431 DENND4BO75064 1496 aaPredicted RBP11.45□□□□□ -0.58
UBE2B-204ENST00000504431 CLN3Q13286 438 aa11.45□□□□□ -0.58
UBE2B-204ENST00000504431 MRPL14Q6P1L8 145 aaKnown RBP11.45□□□□□ -0.58
UBE2B-204ENST00000504431 ETNK1Q9HBU6 452 aa11.45□□□□□ -0.58
UBE2B-204ENST00000504431 MAP3K1Q13233 1512 aa11.45□□□□□ -0.58
UBE2B-204ENST00000504431 A0A1W2PRU2 124 aa11.44□□□□□ -0.58
UBE2B-204ENST00000504431 TMEM229AB2RXF0 380 aa11.44□□□□□ -0.58
UBE2B-204ENST00000504431 DKK1O94907 266 aa11.44□□□□□ -0.58
UBE2B-204ENST00000504431 AGBL1Q96MI9 1066 aa11.44□□□□□ -0.58
UBE2B-204ENST00000504431 ESYT1Q9BSJ8 1104 aa11.44□□□□□ -0.58
UBE2B-204ENST00000504431 ZNF358Q9NW07 568 aa11.44□□□□□ -0.58
UBE2B-204ENST00000504431 SAMD9LQ8IVG5 1584 aa11.44□□□□□ -0.58
UBE2B-204ENST00000504431 CFAP74Q9C0B2 1584 aa11.44□□□□□ -0.58
UBE2B-204ENST00000504431 TRAPPC8Q9Y2L5 1435 aa11.43□□□□□ -0.58
UBE2B-204ENST00000504431 RICTORQ6R327 1708 aa11.43□□□□□ -0.58
UBE2B-204ENST00000504431 TMEM164Q5U3C3 297 aa11.43□□□□□ -0.58
UBE2B-204ENST00000504431 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.43□□□□□ -0.58
UBE2B-204ENST00000504431 STK32AQ8WU08 396 aa11.43□□□□□ -0.58
UBE2B-204ENST00000504431 CNKSR1Q969H4 720 aa11.43□□□□□ -0.58
UBE2B-204ENST00000504431 XAGE2Q96GT9 111 aa11.43□□□□□ -0.58
UBE2B-204ENST00000504431 RAB6BQ9NRW1 208 aa11.43□□□□□ -0.58
UBE2B-204ENST00000504431 PHLDB1Q86UU1 1377 aa11.42□□□□□ -0.58
UBE2B-204ENST00000504431 SFI1A8K8P3 1242 aa11.42□□□□□ -0.58
UBE2B-204ENST00000504431 MEN1O00255 615 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms