RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 ZBTB39O15060 712 aa6.82□□□□□ -1.32
NIPBL-204ENST00000504430 PRC1O43663 620 aa6.82□□□□□ -1.32
NIPBL-204ENST00000504430 LRRC41Q15345 812 aa6.82□□□□□ -1.32
NIPBL-204ENST00000504430 RBCK1Q9BYM8 510 aa6.82□□□□□ -1.32
NIPBL-204ENST00000504430 GIGYF1O75420 1035 aaPredicted RBP6.81□□□□□ -1.32
NIPBL-204ENST00000504430 USP46P62068 366 aa6.81□□□□□ -1.32
NIPBL-204ENST00000504430 SWT1Q5T5J6 900 aaKnown RBP6.81□□□□□ -1.32
NIPBL-204ENST00000504430 SRA1Q9HD15 236 aaKnown RBP6.81□□□□□ -1.32
NIPBL-204ENST00000504430 SETD1BQ9UPS6 1966 aaKnown RBP6.81□□□□□ -1.32
NIPBL-204ENST00000504430 CFAP69A5D8W1 941 aa6.81□□□□□ -1.32
NIPBL-204ENST00000504430 RNF19BQ6ZMZ0 732 aa6.81□□□□□ -1.32
NIPBL-204ENST00000504430 PRKD2Q9BZL6 878 aa6.81□□□□□ -1.32
NIPBL-204ENST00000504430 ZNF408Q9H9D4 720 aa6.81□□□□□ -1.32
NIPBL-204ENST00000504430 COPRSQ9NQ92 184 aa6.81□□□□□ -1.32
NIPBL-204ENST00000504430 DNAJC6O75061 913 aa6.81□□□□□ -1.32
NIPBL-204ENST00000504430 LDHAP00338 332 aaKnown RBP6.81□□□□□ -1.32
NIPBL-204ENST00000504430 TTC39BQ5VTQ0 682 aaPredicted RBP6.81□□□□□ -1.32
NIPBL-204ENST00000504430 SIX5Q8N196 739 aa6.81□□□□□ -1.32
NIPBL-204ENST00000504430 PGBD3Q8N328 593 aa6.81□□□□□ -1.32
NIPBL-204ENST00000504430 HELQQ8TDG4 1101 aa6.81□□□□□ -1.32
NIPBL-204ENST00000504430 FANCLQ9NW38 375 aa6.81□□□□□ -1.32
NIPBL-204ENST00000504430 NOD1Q9Y239 953 aa6.81□□□□□ -1.32
NIPBL-204ENST00000504430 RNF40O75150 1001 aa6.8□□□□□ -1.32
NIPBL-204ENST00000504430 DHX8Q14562 1220 aaKnown RBP6.8□□□□□ -1.32
NIPBL-204ENST00000504430 WDR78Q5VTH9 848 aa6.8□□□□□ -1.32
NIPBL-204ENST00000504430 PI16Q6UXB8 463 aa6.8□□□□□ -1.32
NIPBL-204ENST00000504430 MRFAP1L1Q96HT8 127 aa6.8□□□□□ -1.32
NIPBL-204ENST00000504430 TCEAL9Q9UHQ7 104 aa6.8□□□□□ -1.32
NIPBL-204ENST00000504430 GGT7Q9UJ14 662 aa6.8□□□□□ -1.32
NIPBL-204ENST00000504430 COMMD10Q9Y6G5 202 aa6.8□□□□□ -1.32
NIPBL-204ENST00000504430 ATF4P18848 351 aaPredicted RBP6.8□□□□□ -1.32
NIPBL-204ENST00000504430 EIF1AXP47813 144 aaKnown RBP6.8□□□□□ -1.32
NIPBL-204ENST00000504430 PAK2Q13177 524 aa6.8□□□□□ -1.32
NIPBL-204ENST00000504430 SF3B2Q13435 895 aaKnown RBP6.8□□□□□ -1.32
NIPBL-204ENST00000504430 SEPT9Q9UHD8 586 aaPredicted RBP6.8□□□□□ -1.32
NIPBL-204ENST00000504430 PODNQ7Z5L7 613 aa6.8□□□□□ -1.32
NIPBL-204ENST00000504430 METTL5Q9NRN9 209 aaKnown RBP6.8□□□□□ -1.32
NIPBL-204ENST00000504430 NDUFB5O43674 189 aa6.79□□□□□ -1.32
NIPBL-204ENST00000504430 FZD6O60353 706 aa6.79□□□□□ -1.32
NIPBL-204ENST00000504430 PLCB3Q01970 1234 aa6.79□□□□□ -1.32
NIPBL-204ENST00000504430 ZCRB1Q8TBF4 217 aaKnown RBP6.79□□□□□ -1.32
NIPBL-204ENST00000504430 ARPC5LQ9BPX5 153 aa6.79□□□□□ -1.32
NIPBL-204ENST00000504430 CFHR5Q9BXR6 569 aa6.79□□□□□ -1.32
NIPBL-204ENST00000504430 EID1Q9Y6B2 187 aa6.79□□□□□ -1.32
NIPBL-204ENST00000504430 WEE1P30291 646 aa6.79□□□□□ -1.32
NIPBL-204ENST00000504430 ETFBP38117 255 aa6.79□□□□□ -1.32
NIPBL-204ENST00000504430 TBCELQ5QJ74 424 aa6.79□□□□□ -1.32
NIPBL-204ENST00000504430 C10orf62Q5T681 223 aaPredicted RBP6.79□□□□□ -1.32
NIPBL-204ENST00000504430 PIP4P2Q8N4L2 257 aa6.79□□□□□ -1.32
NIPBL-204ENST00000504430 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.79□□□□□ -1.32
NIPBL-204ENST00000504430 CARD14Q9BXL6 1004 aa6.79□□□□□ -1.32
NIPBL-204ENST00000504430 CTHP32929 405 aa6.78□□□□□ -1.32
NIPBL-204ENST00000504430 ORC1Q13415 861 aa6.78□□□□□ -1.32
NIPBL-204ENST00000504430 UBE4AQ14139 1066 aa6.78□□□□□ -1.32
NIPBL-204ENST00000504430 COL19A1Q14993 1142 aa6.78□□□□□ -1.32
NIPBL-204ENST00000504430 ANKRD13DQ6ZTN6 518 aa6.78□□□□□ -1.32
NIPBL-204ENST00000504430 JAMLQ86YT9 394 aa6.78□□□□□ -1.32
NIPBL-204ENST00000504430 XRCC5P13010 732 aaKnown RBP6.78□□□□□ -1.32
NIPBL-204ENST00000504430 AMOTL1Q8IY63 956 aa6.78□□□□□ -1.32
NIPBL-204ENST00000504430 ADAM32Q8TC27 787 aa6.78□□□□□ -1.32
NIPBL-204ENST00000504430 DOLKQ9UPQ8 538 aa6.78□□□□□ -1.32
NIPBL-204ENST00000504430 PCDHGA11Q9Y5H2 935 aa6.78□□□□□ -1.32
NIPBL-204ENST00000504430 V9GY48 417 aaPredicted RBP6.78□□□□□ -1.32
NIPBL-204ENST00000504430 SLC34A2O95436 690 aa6.78□□□□□ -1.32
NIPBL-204ENST00000504430 PLCG2P16885 1265 aa6.78□□□□□ -1.32
NIPBL-204ENST00000504430 ATP1A2P50993 1020 aa6.78□□□□□ -1.32
NIPBL-204ENST00000504430 C21orf62-AS1Q17RA5 79 aa6.78□□□□□ -1.32
NIPBL-204ENST00000504430 BLOC1S3Q6QNY0 202 aa6.78□□□□□ -1.32
NIPBL-204ENST00000504430 CREBRFQ8IUR6 639 aa6.78□□□□□ -1.32
NIPBL-204ENST00000504430 A6NHS1 94 aa6.77□□□□□ -1.33
NIPBL-204ENST00000504430 GET4Q7L5D6 327 aaPredicted RBP6.77□□□□□ -1.33
NIPBL-204ENST00000504430 SLC27A5Q9Y2P5 690 aa6.77□□□□□ -1.33
NIPBL-204ENST00000504430 HCLS1P14317 486 aaPredicted RBP6.77□□□□□ -1.33
NIPBL-204ENST00000504430 GNALP38405 381 aa6.77□□□□□ -1.33
NIPBL-204ENST00000504430 TKFCQ3LXA3 575 aa6.77□□□□□ -1.33
NIPBL-204ENST00000504430 NEUROD6Q96NK8 337 aa6.77□□□□□ -1.33
NIPBL-204ENST00000504430 FERMT3Q86UX7 667 aa6.77□□□□□ -1.33
NIPBL-204ENST00000504430 CCAR1Q8IX12 1150 aaKnown RBP6.77□□□□□ -1.33
NIPBL-204ENST00000504430 ARMC5Q96C12 935 aa6.77□□□□□ -1.33
NIPBL-204ENST00000504430 BRINP2Q9C0B6 783 aa6.77□□□□□ -1.33
NIPBL-204ENST00000504430 QTRT2Q9H974 415 aaKnown RBP6.77□□□□□ -1.33
NIPBL-204ENST00000504430 NBPF26B4DH59 902 aa6.76□□□□□ -1.33
NIPBL-204ENST00000504430 EXOC5O00471 708 aa6.76□□□□□ -1.33
NIPBL-204ENST00000504430 SNTG2Q9NY99 539 aa6.76□□□□□ -1.33
NIPBL-204ENST00000504430 ESYT3A0FGR9 886 aa6.76□□□□□ -1.33
NIPBL-204ENST00000504430 CFHP08603 1231 aa6.76□□□□□ -1.33
NIPBL-204ENST00000504430 CHMP4BP1P59074 171 aa6.76□□□□□ -1.33
NIPBL-204ENST00000504430 RAB15P59190 212 aa6.76□□□□□ -1.33
NIPBL-204ENST00000504430 SERINC3Q13530 473 aa6.76□□□□□ -1.33
NIPBL-204ENST00000504430 LYPD8Q6UX82 237 aa6.76□□□□□ -1.33
NIPBL-204ENST00000504430 SH3TC2Q8TF17 1288 aa6.76□□□□□ -1.33
NIPBL-204ENST00000504430 HNRNPLLQ8WVV9 542 aaKnown RBP6.76□□□□□ -1.33
NIPBL-204ENST00000504430 RBM19Q9Y4C8 960 aaKnown RBP6.76□□□□□ -1.33
NIPBL-204ENST00000504430 CDKN1CP49918 316 aaPredicted RBP6.75□□□□□ -1.33
NIPBL-204ENST00000504430 RETREG3Q86VR2 466 aa6.75□□□□□ -1.33
NIPBL-204ENST00000504430 ARHGEF10LQ9HCE6 1279 aa6.75□□□□□ -1.33
NIPBL-204ENST00000504430 TRIM50Q86XT4 487 aa6.75□□□□□ -1.33
NIPBL-204ENST00000504430 MAGEB6P1A0A0J9YX57 407 aa6.74□□□□□ -1.33
NIPBL-204ENST00000504430 ZBTB24O43167 697 aaPredicted RBP6.74□□□□□ -1.33
NIPBL-204ENST00000504430 FAM193AP78312 1265 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms