RNA–Protein interactions for RNA: ENST00000504339.1

LINC02239-201, Transcript of long intergenic non-protein coding RNA 2239, humanhuman

TSL 1 (best) BASIC

Gene LINC02239, Length 2,290 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02239-201ENST00000504339 UBTFL1P0CB47 393 aaPredicted RBP11.22□□□□□ -0.61
LINC02239-201ENST00000504339 TATP17735 454 aaPredicted RBP11.22□□□□□ -0.61
LINC02239-201ENST00000504339 POLA2Q14181 598 aa11.22□□□□□ -0.61
LINC02239-201ENST00000504339 ZNF790Q6PG37 636 aa11.22□□□□□ -0.61
LINC02239-201ENST00000504339 SLKQ9H2G2 1235 aaPredicted RBP11.22□□□□□ -0.61
LINC02239-201ENST00000504339 FRAT2O75474 233 aaPredicted RBP11.21□□□□□ -0.61
LINC02239-201ENST00000504339 CD2BP2O95400 341 aaKnown RBP11.21□□□□□ -0.61
LINC02239-201ENST00000504339 ABCC6O95255 1503 aa11.21□□□□□ -0.61
LINC02239-201ENST00000504339 CSB-PGBD3P0DP91 1061 aa11.21□□□□□ -0.62
LINC02239-201ENST00000504339 PPP1R42Q7Z4L9 355 aa11.21□□□□□ -0.62
LINC02239-201ENST00000504339 LRP10Q7Z4F1 713 aa11.2□□□□□ -0.62
LINC02239-201ENST00000504339 IFNL2Q8IZJ0 200 aa11.2□□□□□ -0.62
LINC02239-201ENST00000504339 ZNF496Q96IT1 587 aaPredicted RBP11.2□□□□□ -0.62
LINC02239-201ENST00000504339 RBM42Q9BTD8 480 aaKnown RBP11.2□□□□□ -0.62
LINC02239-201ENST00000504339 SPG7Q9UQ90 795 aa11.2□□□□□ -0.62
LINC02239-201ENST00000504339 MAP3K2Q9Y2U5 619 aa11.2□□□□□ -0.62
LINC02239-201ENST00000504339 LRRCC1Q9C099 1032 aa11.2□□□□□ -0.62
LINC02239-201ENST00000504339 KSR2Q6VAB6 950 aa11.19□□□□□ -0.62
LINC02239-201ENST00000504339 SPRYD3Q8NCJ5 442 aa11.19□□□□□ -0.62
LINC02239-201ENST00000504339 DDX21Q9NR30 783 aaKnown RBP eCLIP11.19□□□□□ -0.62
LINC02239-201ENST00000504339 SCN11AQ9UI33 1791 aa11.19□□□□□ -0.62
LINC02239-201ENST00000504339 MRC1P22897 1456 aa11.19□□□□□ -0.62
LINC02239-201ENST00000504339 CWF19L2Q2TBE0 894 aaKnown RBP11.19□□□□□ -0.62
LINC02239-201ENST00000504339 SNX21Q969T3 373 aa11.19□□□□□ -0.62
LINC02239-201ENST00000504339 KAZALD1Q96I82 304 aa11.19□□□□□ -0.62
LINC02239-201ENST00000504339 DCAF5Q96JK2 942 aa11.19□□□□□ -0.62
LINC02239-201ENST00000504339 USP26Q9BXU7 913 aa11.19□□□□□ -0.62
LINC02239-201ENST00000504339 DDIT3P35638 169 aa11.18□□□□□ -0.62
LINC02239-201ENST00000504339 CHMP4AQ9BY43 222 aa11.18□□□□□ -0.62
LINC02239-201ENST00000504339 STAP2Q9UGK3 403 aa11.18□□□□□ -0.62
LINC02239-201ENST00000504339 USP16Q9Y5T5 823 aa11.18□□□□□ -0.62
LINC02239-201ENST00000504339 PKD1L3Q7Z443 1732 aa11.18□□□□□ -0.62
LINC02239-201ENST00000504339 IL1RAPL2Q9NP60 686 aa11.18□□□□□ -0.62
LINC02239-201ENST00000504339 HYPKQ9NX55 129 aa11.18□□□□□ -0.62
LINC02239-201ENST00000504339 WDR17Q8IZU2 1322 aa11.17□□□□□ -0.62
LINC02239-201ENST00000504339 PLEKHG2Q9H7P9 1386 aa11.17□□□□□ -0.62
LINC02239-201ENST00000504339 C5P01031 1676 aa11.17□□□□□ -0.62
LINC02239-201ENST00000504339 SRGAP3O43295 1099 aa11.17□□□□□ -0.62
LINC02239-201ENST00000504339 IGKV5-2P06315 115 aa11.17□□□□□ -0.62
LINC02239-201ENST00000504339 MX1P20591 662 aa11.17□□□□□ -0.62
LINC02239-201ENST00000504339 UNC5CLQ8IV45 518 aa11.17□□□□□ -0.62
LINC02239-201ENST00000504339 PRDM11Q9NQV5 511 aa11.17□□□□□ -0.62
LINC02239-201ENST00000504339 COL5A2P05997 1499 aaPredicted RBP11.17□□□□□ -0.62
LINC02239-201ENST00000504339 GLI3P10071 1580 aa11.17□□□□□ -0.62
LINC02239-201ENST00000504339 PIP4K2AP48426 406 aaPredicted RBP11.16□□□□□ -0.62
LINC02239-201ENST00000504339 MTX1Q13505 466 aa11.16□□□□□ -0.62
LINC02239-201ENST00000504339 IL27Q8NEV9 243 aa11.16□□□□□ -0.62
LINC02239-201ENST00000504339 SURF6O75683 361 aaKnown RBP11.16□□□□□ -0.62
LINC02239-201ENST00000504339 ALDH1L1O75891 902 aa11.16□□□□□ -0.62
LINC02239-201ENST00000504339 AIMP1Q12904 312 aaKnown RBP11.16□□□□□ -0.62
LINC02239-201ENST00000504339 LINS1Q8NG48 757 aa11.15□□□□□ -0.62
LINC02239-201ENST00000504339 RHPN1Q8TCX5 695 aa11.15□□□□□ -0.62
LINC02239-201ENST00000504339 UTYO14607 1347 aa11.15□□□□□ -0.62
LINC02239-201ENST00000504339 TUBGCP6Q96RT7 1819 aa11.15□□□□□ -0.62
LINC02239-201ENST00000504339 MYL6BP14649 208 aa11.15□□□□□ -0.62
LINC02239-201ENST00000504339 NUTM1Q86Y26 1132 aa11.15□□□□□ -0.62
LINC02239-201ENST00000504339 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.15□□□□□ -0.62
LINC02239-201ENST00000504339 GSE1Q14687 1217 aa11.14□□□□□ -0.63
LINC02239-201ENST00000504339 LARP1Q6PKG0 1096 aaKnown RBP11.14□□□□□ -0.63
LINC02239-201ENST00000504339 TOM1L2Q6ZVM7 507 aa11.14□□□□□ -0.63
LINC02239-201ENST00000504339 COPS6Q7L5N1 327 aa11.14□□□□□ -0.63
LINC02239-201ENST00000504339 PI4K2BQ8TCG2 481 aa11.14□□□□□ -0.63
LINC02239-201ENST00000504339 XAGE3Q8WTP9 111 aa11.14□□□□□ -0.63
LINC02239-201ENST00000504339 SUCLG2Q96I99 432 aa11.14□□□□□ -0.63
LINC02239-201ENST00000504339 IL25Q9H293 177 aa11.14□□□□□ -0.63
LINC02239-201ENST00000504339 RAB11FIP3O75154 756 aa11.14□□□□□ -0.63
LINC02239-201ENST00000504339 SNRPA1P09661 255 aaKnown RBP11.14□□□□□ -0.63
LINC02239-201ENST00000504339 HSCBQ8IWL3 235 aa11.14□□□□□ -0.63
LINC02239-201ENST00000504339 GRM8O00222 908 aa11.13□□□□□ -0.63
LINC02239-201ENST00000504339 CABP4P57796 275 aa11.13□□□□□ -0.63
LINC02239-201ENST00000504339 ZCRB1Q8TBF4 217 aaKnown RBP11.13□□□□□ -0.63
LINC02239-201ENST00000504339 CARD10Q9BWT7 1032 aa11.13□□□□□ -0.63
LINC02239-201ENST00000504339 PA2G4Q9UQ80 394 aaKnown RBP11.13□□□□□ -0.63
LINC02239-201ENST00000504339 ABCA3Q99758 1704 aa11.13□□□□□ -0.63
LINC02239-201ENST00000504339 CHMLP26374 656 aa11.12□□□□□ -0.63
LINC02239-201ENST00000504339 NKX1-1Q15270 411 aaPredicted RBP11.12□□□□□ -0.63
LINC02239-201ENST00000504339 C9orf78Q9NZ63 289 aaPredicted RBP11.12□□□□□ -0.63
LINC02239-201ENST00000504339 NEURL1BA8MQ27 555 aa11.12□□□□□ -0.63
LINC02239-201ENST00000504339 HSP90AB1P08238 724 aaKnown RBP11.12□□□□□ -0.63
LINC02239-201ENST00000504339 EPHA10Q5JZY3 1008 aa11.12□□□□□ -0.63
LINC02239-201ENST00000504339 KIF1BPQ96EK5 621 aa11.12□□□□□ -0.63
LINC02239-201ENST00000504339 FMNL2Q96PY5 1086 aa11.12□□□□□ -0.63
LINC02239-201ENST00000504339 BICC1Q9H694 974 aaKnown RBP11.12□□□□□ -0.63
LINC02239-201ENST00000504339 AOX1Q06278 1338 aa11.11□□□□□ -0.63
LINC02239-201ENST00000504339 NBPF26B4DH59 902 aa11.11□□□□□ -0.63
LINC02239-201ENST00000504339 ERC2O15083 957 aa11.11□□□□□ -0.63
LINC02239-201ENST00000504339 NBPF14Q5TI25 921 aa11.11□□□□□ -0.63
LINC02239-201ENST00000504339 NBPF10Q6P3W6 841 aaKnown RBP11.11□□□□□ -0.63
LINC02239-201ENST00000504339 NBPF15Q8N660 670 aa11.11□□□□□ -0.63
LINC02239-201ENST00000504339 ESYT1Q9BSJ8 1104 aa11.11□□□□□ -0.63
LINC02239-201ENST00000504339 METTL22Q9BUU2 404 aaPredicted RBP11.11□□□□□ -0.63
LINC02239-201ENST00000504339 GCKRQ14397 625 aa11.11□□□□□ -0.63
LINC02239-201ENST00000504339 RIC3Q7Z5B4 369 aa11.11□□□□□ -0.63
LINC02239-201ENST00000504339 TTC5Q8N0Z6 440 aa11.11□□□□□ -0.63
LINC02239-201ENST00000504339 STRN4Q9NRL3 753 aa11.11□□□□□ -0.63
LINC02239-201ENST00000504339 PARP4Q9UKK3 1724 aaKnown RBP11.11□□□□□ -0.63
LINC02239-201ENST00000504339 PCDH11XQ9BZA7 1347 aa11.1□□□□□ -0.63
LINC02239-201ENST00000504339 PCDH11YQ9BZA8 1340 aa11.1□□□□□ -0.63
LINC02239-201ENST00000504339 NHSL1Q5SYE7 1610 aa11.1□□□□□ -0.63
LINC02239-201ENST00000504339 K7ELQ4 463 aaPredicted RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms