RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 FLIIQ13045 1269 aa19.31■□□□□ 0.68
PCDHA1-203ENST00000504120 SF3B2Q13435 895 aaKnown RBP19.31■□□□□ 0.68
PCDHA1-203ENST00000504120 USHBP1Q8N6Y0 703 aa19.31■□□□□ 0.68
PCDHA1-203ENST00000504120 NAPBQ9H115 298 aa19.31■□□□□ 0.68
PCDHA1-203ENST00000504120 KIF2AO00139 706 aaPredicted RBP19.31■□□□□ 0.68
PCDHA1-203ENST00000504120 AMOTL2Q9Y2J4 779 aa19.31■□□□□ 0.68
PCDHA1-203ENST00000504120 WDR7Q9Y4E6 1490 aa19.31■□□□□ 0.68
PCDHA1-203ENST00000504120 EIF5P55010 431 aaKnown RBP19.31■□□□□ 0.68
PCDHA1-203ENST00000504120 CAMK4Q16566 473 aa19.31■□□□□ 0.68
PCDHA1-203ENST00000504120 MAP3K12Q12852 859 aa19.3■□□□□ 0.68
PCDHA1-203ENST00000504120 SYCP2Q9BX26 1530 aa19.3■□□□□ 0.68
PCDHA1-203ENST00000504120 SHANK2Q9UPX8 1470 aa19.3■□□□□ 0.68
PCDHA1-203ENST00000504120 ZNF76P36508 570 aa19.3■□□□□ 0.68
PCDHA1-203ENST00000504120 BMP2KLQ5H9B9 411 aa19.3■□□□□ 0.68
PCDHA1-203ENST00000504120 TSPYL1Q9H0U9 437 aa19.3■□□□□ 0.68
PCDHA1-203ENST00000504120 C8orf76Q96K31 380 aa19.3■□□□□ 0.68
PCDHA1-203ENST00000504120 NUP160Q12769 1436 aa19.3■□□□□ 0.68
PCDHA1-203ENST00000504120 PHAXQ9H814 394 aaKnown RBP19.29■□□□□ 0.68
PCDHA1-203ENST00000504120 FBXO3Q9UK99 471 aa19.29■□□□□ 0.68
PCDHA1-203ENST00000504120 MPRIPQ6WCQ1 1025 aa19.29■□□□□ 0.68
PCDHA1-203ENST00000504120 EVI5LQ96CN4 794 aa19.29■□□□□ 0.68
PCDHA1-203ENST00000504120 TBC1D2Q9BYX2 928 aa19.29■□□□□ 0.68
PCDHA1-203ENST00000504120 CCDC8Q9H0W5 538 aaPredicted RBP19.29■□□□□ 0.68
PCDHA1-203ENST00000504120 ARHGAP29Q52LW3 1261 aa19.29■□□□□ 0.68
PCDHA1-203ENST00000504120 RALGAPBQ86X10 1494 aa19.28■□□□□ 0.68
PCDHA1-203ENST00000504120 CTAGE5O15320 804 aa19.28■□□□□ 0.68
PCDHA1-203ENST00000504120 PIBF1Q8WXW3 757 aa19.28■□□□□ 0.68
PCDHA1-203ENST00000504120 SEC63Q9UGP8 760 aaKnown RBP19.28■□□□□ 0.68
PCDHA1-203ENST00000504120 ZNF518AQ6AHZ1 1483 aa19.28■□□□□ 0.68
PCDHA1-203ENST00000504120 SFPQP23246 707 aaKnown RBP eCLIP19.28■□□□□ 0.68
PCDHA1-203ENST00000504120 ZNF397Q8NF99 534 aaPredicted RBP19.28■□□□□ 0.68
PCDHA1-203ENST00000504120 ECHDC1Q9NTX5 307 aa19.28■□□□□ 0.68
PCDHA1-203ENST00000504120 ANKRD36BQ8N2N9 1353 aa19.28■□□□□ 0.68
PCDHA1-203ENST00000504120 USP5P45974 858 aa19.27■□□□□ 0.68
PCDHA1-203ENST00000504120 MINDY4BA8MYZ0 360 aa19.27■□□□□ 0.68
PCDHA1-203ENST00000504120 ZNF213O14771 459 aa19.27■□□□□ 0.68
PCDHA1-203ENST00000504120 SLC5A1P13866 664 aa19.27■□□□□ 0.68
PCDHA1-203ENST00000504120 TMOD2Q9NZR1 351 aa19.27■□□□□ 0.67
PCDHA1-203ENST00000504120 KIAA1328Q86T90 577 aa19.26■□□□□ 0.67
PCDHA1-203ENST00000504120 CTCFLQ8NI51 663 aaPredicted RBP19.26■□□□□ 0.67
PCDHA1-203ENST00000504120 RNF41Q9H4P4 317 aaPredicted RBP19.26■□□□□ 0.67
PCDHA1-203ENST00000504120 A2MP01023 1474 aa19.26■□□□□ 0.67
PCDHA1-203ENST00000504120 FBXO31Q5XUX0 539 aaPredicted RBP19.26■□□□□ 0.67
PCDHA1-203ENST00000504120 MKNK2Q9HBH9 465 aa19.26■□□□□ 0.67
PCDHA1-203ENST00000504120 DISP3Q9P2K9 1392 aa19.26■□□□□ 0.67
PCDHA1-203ENST00000504120 A0A087WZG4 1122 aa19.26■□□□□ 0.67
PCDHA1-203ENST00000504120 NEFHP12036 1026 aa19.26■□□□□ 0.67
PCDHA1-203ENST00000504120 POLR3DP05423 398 aaPredicted RBP19.25■□□□□ 0.67
PCDHA1-203ENST00000504120 ZSCAN12O43309 604 aa19.25■□□□□ 0.67
PCDHA1-203ENST00000504120 SSFA2P28290 1259 aa19.25■□□□□ 0.67
PCDHA1-203ENST00000504120 TNPO1Q92973 898 aaKnown RBP19.25■□□□□ 0.67
PCDHA1-203ENST00000504120 ANKRD18BA2A2Z9 1011 aa19.25■□□□□ 0.67
PCDHA1-203ENST00000504120 IQCA1Q86XH1 822 aa19.25■□□□□ 0.67
PCDHA1-203ENST00000504120 PPP1R1BQ9UD71 204 aaPredicted RBP19.25■□□□□ 0.67
PCDHA1-203ENST00000504120 TRMT112Q9UI30 125 aaKnown RBP19.25■□□□□ 0.67
PCDHA1-203ENST00000504120 SLC12A7Q9Y666 1083 aa19.25■□□□□ 0.67
PCDHA1-203ENST00000504120 TEX14Q8IWB6 1497 aa19.25■□□□□ 0.67
PCDHA1-203ENST00000504120 ABCA5Q8WWZ7 1642 aa19.25■□□□□ 0.67
PCDHA1-203ENST00000504120 ZPR1O75312 459 aa19.25■□□□□ 0.67
PCDHA1-203ENST00000504120 SKAP1Q86WV1 359 aa19.25■□□□□ 0.67
PCDHA1-203ENST00000504120 UBXN4Q92575 508 aa19.25■□□□□ 0.67
PCDHA1-203ENST00000504120 TAF4BQ92750 862 aa19.25■□□□□ 0.67
PCDHA1-203ENST00000504120 TBC1D9Q6ZT07 1266 aa19.24■□□□□ 0.67
PCDHA1-203ENST00000504120 MBIPQ9NS73 344 aa19.24■□□□□ 0.67
PCDHA1-203ENST00000504120 SEPT11Q9NVA2 429 aaKnown RBP19.24■□□□□ 0.67
PCDHA1-203ENST00000504120 CCDC148Q8NFR7 591 aa19.24■□□□□ 0.67
PCDHA1-203ENST00000504120 PIK3R4Q99570 1358 aa19.24■□□□□ 0.67
PCDHA1-203ENST00000504120 PPP1R12BO60237 982 aaPredicted RBP19.24■□□□□ 0.67
PCDHA1-203ENST00000504120 ANKRD18AQ8IVF6 992 aa19.24■□□□□ 0.67
PCDHA1-203ENST00000504120 FOXO3O43524 673 aa19.23■□□□□ 0.67
PCDHA1-203ENST00000504120 PDCL2Q8N4E4 241 aa19.23■□□□□ 0.67
PCDHA1-203ENST00000504120 DDX19AQ9NUU7 478 aaKnown RBP19.23■□□□□ 0.67
PCDHA1-203ENST00000504120 KIAA0754O94854 1291 aa19.23■□□□□ 0.67
PCDHA1-203ENST00000504120 ARHGAP45Q92619 1136 aa19.23■□□□□ 0.67
PCDHA1-203ENST00000504120 PTPN14Q15678 1187 aa19.23■□□□□ 0.67
PCDHA1-203ENST00000504120 SEPT7Q16181 437 aaKnown RBP19.23■□□□□ 0.67
PCDHA1-203ENST00000504120 ZRSR2Q15696 482 aaKnown RBP19.23■□□□□ 0.67
PCDHA1-203ENST00000504120 DZIP1Q86YF9 867 aaKnown RBP19.23■□□□□ 0.67
PCDHA1-203ENST00000504120 MAP3K2Q9Y2U5 619 aa19.23■□□□□ 0.67
PCDHA1-203ENST00000504120 PBRM1Q86U86 1689 aa19.22■□□□□ 0.67
PCDHA1-203ENST00000504120 TEX13AQ9BXU3 409 aaPredicted RBP19.22■□□□□ 0.67
PCDHA1-203ENST00000504120 MPHOSPH10O00566 681 aaKnown RBP19.22■□□□□ 0.67
PCDHA1-203ENST00000504120 SSRP1Q08945 709 aaKnown RBP19.22■□□□□ 0.67
PCDHA1-203ENST00000504120 TTC22Q5TAA0 569 aa19.21■□□□□ 0.67
PCDHA1-203ENST00000504120 TTF1Q15361 905 aaPredicted RBP19.21■□□□□ 0.67
PCDHA1-203ENST00000504120 FKBP15Q5T1M5 1219 aa19.21■□□□□ 0.67
PCDHA1-203ENST00000504120 PAF1Q8N7H5 531 aa19.21■□□□□ 0.67
PCDHA1-203ENST00000504120 GBP3Q9H0R5 595 aa19.21■□□□□ 0.67
PCDHA1-203ENST00000504120 ABCC10Q5T3U5 1492 aa19.21■□□□□ 0.67
PCDHA1-203ENST00000504120 GOLGA8BA8MQT2 603 aa19.21■□□□□ 0.67
PCDHA1-203ENST00000504120 RAB34Q9BZG1 259 aa19.21■□□□□ 0.67
PCDHA1-203ENST00000504120 DISP1Q96F81 1524 aa19.21■□□□□ 0.67
PCDHA1-203ENST00000504120 GOLGA8AA7E2F4 631 aa19.21■□□□□ 0.67
PCDHA1-203ENST00000504120 SPA17Q15506 151 aa19.21■□□□□ 0.67
PCDHA1-203ENST00000504120 JAKMIP3Q5VZ66 844 aa19.21■□□□□ 0.67
PCDHA1-203ENST00000504120 IFNL2Q8IZJ0 200 aa19.2■□□□□ 0.66
PCDHA1-203ENST00000504120 IFIT3O14879 490 aaKnown RBP19.2■□□□□ 0.66
PCDHA1-203ENST00000504120 RANBP6O60518 1105 aaKnown RBP19.2■□□□□ 0.66
PCDHA1-203ENST00000504120 HDAC1Q13547 482 aaPredicted RBP19.2■□□□□ 0.66
PCDHA1-203ENST00000504120 KRI1Q8N9T8 703 aaKnown RBP19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms