RNA–Protein interactions for RNA: ENST00000504016.1

SUB1-204, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 3

Gene SUB1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-204ENST00000504016 C1orf229Q6ZS94 237 aaPredicted RBP8.86□□□□□ -0.99
SUB1-204ENST00000504016 POM121Q96HA1 1249 aa8.86□□□□□ -0.99
SUB1-204ENST00000504016 RRAGCQ9HB90 399 aa8.86□□□□□ -0.99
SUB1-204ENST00000504016 BACH1O14867 736 aa8.85□□□□□ -0.99
SUB1-204ENST00000504016 ATXN7O15265 892 aaPredicted RBP8.85□□□□□ -0.99
SUB1-204ENST00000504016 TATP17735 454 aaPredicted RBP8.85□□□□□ -0.99
SUB1-204ENST00000504016 SNRPNP63162 240 aaKnown RBP8.85□□□□□ -0.99
SUB1-204ENST00000504016 GTF2IP78347 998 aa8.85□□□□□ -0.99
SUB1-204ENST00000504016 MTFR1Q15390 333 aa8.85□□□□□ -0.99
SUB1-204ENST00000504016 DNAAF2Q9NVR5 837 aaKnown RBP8.85□□□□□ -0.99
SUB1-204ENST00000504016 A0A1W2PNR3 127 aa8.84□□□□□ -0.99
SUB1-204ENST00000504016 AMPD1P23109 780 aa8.84□□□□□ -0.99
SUB1-204ENST00000504016 PLA2G4EQ3MJ16 856 aa8.84□□□□□ -0.99
SUB1-204ENST00000504016 NFATC2IPQ8NCF5 419 aa8.84□□□□□ -0.99
SUB1-204ENST00000504016 GGA1Q9UJY5 639 aa8.84□□□□□ -0.99
SUB1-204ENST00000504016 MKL2Q9ULH7 1088 aa8.84□□□□□ -0.99
SUB1-204ENST00000504016 IQSEC3Q9UPP2 1182 aaPredicted RBP8.84□□□□□ -0.99
SUB1-204ENST00000504016 GJA3Q9Y6H8 435 aa8.84□□□□□ -0.99
SUB1-204ENST00000504016 NCOA4Q13772 614 aa8.83□□□□□ -1
SUB1-204ENST00000504016 USP3Q9Y6I4 520 aa8.83□□□□□ -1
SUB1-204ENST00000504016 DCDC2BA2VCK2 349 aa8.82□□□□□ -1
SUB1-204ENST00000504016 MSTNO14793 375 aa8.82□□□□□ -1
SUB1-204ENST00000504016 UBTFP17480 764 aaKnown RBP8.82□□□□□ -1
SUB1-204ENST00000504016 BICDL1Q6ZP65 573 aa8.82□□□□□ -1
SUB1-204ENST00000504016 SLCO4C1Q6ZQN7 724 aa8.82□□□□□ -1
SUB1-204ENST00000504016 ZNF295-AS1Q8N0V1 137 aa8.82□□□□□ -1
SUB1-204ENST00000504016 DEPDC4Q8N2C3 294 aa8.82□□□□□ -1
SUB1-204ENST00000504016 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.82□□□□□ -1
SUB1-204ENST00000504016 ZDHHC3Q9NYG2 299 aa8.82□□□□□ -1
SUB1-204ENST00000504016 PARP3Q9Y6F1 533 aa8.82□□□□□ -1
SUB1-204ENST00000504016 USP17L5A8MUK1 530 aa8.81□□□□□ -1
SUB1-204ENST00000504016 KHNYNO15037 678 aaKnown RBP8.81□□□□□ -1
SUB1-204ENST00000504016 ARAFP10398 606 aa8.81□□□□□ -1
SUB1-204ENST00000504016 MAPTP10636 758 aaKnown RBP8.81□□□□□ -1
SUB1-204ENST00000504016 FLIIQ13045 1269 aa8.81□□□□□ -1
SUB1-204ENST00000504016 ZIC5Q96T25 663 aa8.81□□□□□ -1
SUB1-204ENST00000504016 NEURL1BA8MQ27 555 aa8.8□□□□□ -1
SUB1-204ENST00000504016 TNP2Q05952 138 aa8.8□□□□□ -1
SUB1-204ENST00000504016 TMEM132AQ24JP5 1023 aa8.8□□□□□ -1
SUB1-204ENST00000504016 ZNF358Q9NW07 568 aa8.8□□□□□ -1
SUB1-204ENST00000504016 CD33P20138 364 aa8.79□□□□□ -1
SUB1-204ENST00000504016 BTBD6Q96KE9 485 aa8.79□□□□□ -1
SUB1-204ENST00000504016 SCHIP1Q9P0W5 487 aaPredicted RBP8.79□□□□□ -1
SUB1-204ENST00000504016 LOC100996750A0A140TA64 210 aa8.78□□□□□ -1
SUB1-204ENST00000504016 POM121CA8CG34 1229 aa8.78□□□□□ -1
SUB1-204ENST00000504016 EPXP11678 715 aa8.78□□□□□ -1
SUB1-204ENST00000504016 TRIM50Q86XT4 487 aa8.78□□□□□ -1
SUB1-204ENST00000504016 L3MBTL2Q969R5 705 aa8.78□□□□□ -1
SUB1-204ENST00000504016 SPOCK3Q9BQ16 436 aa8.78□□□□□ -1
SUB1-204ENST00000504016 KRTAP4-6Q9BYQ5 205 aa8.78□□□□□ -1
SUB1-204ENST00000504016 TXLNAP40222 546 aa8.77□□□□□ -1.01
SUB1-204ENST00000504016 FAM182BQ5T319 152 aa8.77□□□□□ -1.01
SUB1-204ENST00000504016 PRR12Q9ULL5 1215 aa8.77□□□□□ -1.01
SUB1-204ENST00000504016 ZNF232Q9UNY5 417 aa8.77□□□□□ -1.01
SUB1-204ENST00000504016 PIK3R2O00459 728 aa8.76□□□□□ -1.01
SUB1-204ENST00000504016 ITGB2P05107 769 aa8.76□□□□□ -1.01
SUB1-204ENST00000504016 FAM157BP0CG42 384 aa8.76□□□□□ -1.01
SUB1-204ENST00000504016 ADH6P28332 368 aa8.76□□□□□ -1.01
SUB1-204ENST00000504016 NOS2P35228 1153 aa8.76□□□□□ -1.01
SUB1-204ENST00000504016 TEAD4Q15561 434 aa8.76□□□□□ -1.01
SUB1-204ENST00000504016 TBCELQ5QJ74 424 aa8.76□□□□□ -1.01
SUB1-204ENST00000504016 HDGFL1Q5TGJ6 251 aa8.76□□□□□ -1.01
SUB1-204ENST00000504016 TNS4Q8IZW8 715 aa8.76□□□□□ -1.01
SUB1-204ENST00000504016 ZDHHC1Q8WTX9 485 aa8.76□□□□□ -1.01
SUB1-204ENST00000504016 NEUROD4Q9HD90 331 aa8.76□□□□□ -1.01
SUB1-204ENST00000504016 ATP1A2P50993 1020 aa8.75□□□□□ -1.01
SUB1-204ENST00000504016 GRIN2CQ14957 1233 aa8.75□□□□□ -1.01
SUB1-204ENST00000504016 SAMD5Q5TGI4 173 aa8.75□□□□□ -1.01
SUB1-204ENST00000504016 LINC00114Q6XXX2 140 aa8.75□□□□□ -1.01
SUB1-204ENST00000504016 ALYREFQ86V81 257 aaKnown RBP8.75□□□□□ -1.01
SUB1-204ENST00000504016 SLC9A9Q8IVB4 645 aa8.75□□□□□ -1.01
SUB1-204ENST00000504016 TPCN2Q8NHX9 752 aa8.75□□□□□ -1.01
SUB1-204ENST00000504016 ADAMTS19Q8TE59 1207 aa8.75□□□□□ -1.01
SUB1-204ENST00000504016 MARK1Q9P0L2 795 aa8.75□□□□□ -1.01
SUB1-204ENST00000504016 HCN2Q9UL51 889 aa8.75□□□□□ -1.01
SUB1-204ENST00000504016 KRBA1A5PL33 1030 aa8.74□□□□□ -1.01
SUB1-204ENST00000504016 USP17L3A6NCW0 530 aa8.74□□□□□ -1.01
SUB1-204ENST00000504016 USP17L4A6NCW7 530 aa8.74□□□□□ -1.01
SUB1-204ENST00000504016 GNB5O14775 395 aa8.74□□□□□ -1.01
SUB1-204ENST00000504016 HOXB4P17483 251 aaPredicted RBP8.74□□□□□ -1.01
SUB1-204ENST00000504016 COL8A1P27658 744 aa8.74□□□□□ -1.01
SUB1-204ENST00000504016 EPHA4P54764 986 aa8.74□□□□□ -1.01
SUB1-204ENST00000504016 PCBP4P57723 403 aaKnown RBP8.74□□□□□ -1.01
SUB1-204ENST00000504016 CCDC102BQ68D86 513 aa8.74□□□□□ -1.01
SUB1-204ENST00000504016 USP17L2Q6R6M4 530 aa8.74□□□□□ -1.01
SUB1-204ENST00000504016 USP17L1Q7RTZ2 530 aa8.74□□□□□ -1.01
SUB1-204ENST00000504016 AVENQ9NQS1 362 aaPredicted RBP8.74□□□□□ -1.01
SUB1-204ENST00000504016 KLF15Q9UIH9 416 aa8.74□□□□□ -1.01
SUB1-204ENST00000504016 SERTM1A2A2V5 107 aa8.73□□□□□ -1.01
SUB1-204ENST00000504016 ZBTB7BO15156 539 aaPredicted RBP8.73□□□□□ -1.01
SUB1-204ENST00000504016 PROCP04070 461 aa8.73□□□□□ -1.01
SUB1-204ENST00000504016 LRRC69Q6ZNQ3 347 aa8.73□□□□□ -1.01
SUB1-204ENST00000504016 CHSY3Q70JA7 882 aa8.73□□□□□ -1.01
SUB1-204ENST00000504016 PLEKHM2Q8IWE5 1019 aa8.73□□□□□ -1.01
SUB1-204ENST00000504016 SUV39H2Q9H5I1 410 aa8.73□□□□□ -1.01
SUB1-204ENST00000504016 EML1O00423 815 aa8.72□□□□□ -1.01
SUB1-204ENST00000504016 ATP9BO43861 1147 aa8.72□□□□□ -1.01
SUB1-204ENST00000504016 LAMC2Q13753 1193 aa8.72□□□□□ -1.01
SUB1-204ENST00000504016 FCHSD1Q86WN1 690 aa8.72□□□□□ -1.01
SUB1-204ENST00000504016 STRN4Q9NRL3 753 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms