RNA–Protein interactions for RNA: ENST00000503659.5

RNF4-204, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 558 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-204ENST00000503659 RTF1Q92541 710 aaKnown RBP24.31■■□□□ 1.48
RNF4-204ENST00000503659 N4BP2Q86UW6 1770 aaPredicted RBP24.31■■□□□ 1.48
RNF4-204ENST00000503659 BTBD11A6QL63 1104 aa24.3■■□□□ 1.48
RNF4-204ENST00000503659 HTATSF1O43719 755 aaKnown RBP24.3■■□□□ 1.48
RNF4-204ENST00000503659 TGFB2P61812 414 aa24.3■■□□□ 1.48
RNF4-204ENST00000503659 MYBBP1AQ9BQG0 1328 aaKnown RBP24.3■■□□□ 1.48
RNF4-204ENST00000503659 FKBP8Q14318 412 aa24.29■■□□□ 1.48
RNF4-204ENST00000503659 KDM3BQ7LBC6 1761 aa24.29■■□□□ 1.48
RNF4-204ENST00000503659 PXDNLA1KZ92 1463 aa24.28■■□□□ 1.48
RNF4-204ENST00000503659 PARP3Q9Y6F1 533 aa24.28■■□□□ 1.48
RNF4-204ENST00000503659 BRCA1P38398 1863 aaKnown RBP24.28■■□□□ 1.48
RNF4-204ENST00000503659 SCN7AQ01118 1682 aa24.27■■□□□ 1.48
RNF4-204ENST00000503659 FMNL2Q96PY5 1086 aa24.27■■□□□ 1.48
RNF4-204ENST00000503659 STARD3NLO95772 234 aa24.26■■□□□ 1.47
RNF4-204ENST00000503659 AFDNP55196 1824 aaKnown RBP24.26■■□□□ 1.47
RNF4-204ENST00000503659 CANXP27824 592 aaKnown RBP24.25■■□□□ 1.47
RNF4-204ENST00000503659 DDR1Q08345 913 aa24.25■■□□□ 1.47
RNF4-204ENST00000503659 NFE2L2Q16236 605 aa24.25■■□□□ 1.47
RNF4-204ENST00000503659 USPL1Q5W0Q7 1092 aa24.25■■□□□ 1.47
RNF4-204ENST00000503659 NRXN2Q9P2S2 1712 aa24.24■■□□□ 1.47
RNF4-204ENST00000503659 LAMB4A4D0S4 1761 aa24.24■■□□□ 1.47
RNF4-204ENST00000503659 NEFMP07197 916 aa24.24■■□□□ 1.47
RNF4-204ENST00000503659 ZEB1P37275 1124 aaPredicted RBP24.24■■□□□ 1.47
RNF4-204ENST00000503659 TEX13AQ9BXU3 409 aaPredicted RBP24.24■■□□□ 1.47
RNF4-204ENST00000503659 NARFQ9UHQ1 456 aa24.24■■□□□ 1.47
RNF4-204ENST00000503659 ZPR1O75312 459 aa24.23■■□□□ 1.47
RNF4-204ENST00000503659 EIF5P55010 431 aaKnown RBP24.23■■□□□ 1.47
RNF4-204ENST00000503659 BCORQ6W2J9 1755 aa24.22■■□□□ 1.47
RNF4-204ENST00000503659 MAPK8IP3Q9UPT6 1336 aa24.22■■□□□ 1.47
RNF4-204ENST00000503659 TM4SF1P30408 202 aa24.22■■□□□ 1.47
RNF4-204ENST00000503659 PNNQ9H307 717 aaKnown RBP24.22■■□□□ 1.47
RNF4-204ENST00000503659 BCL2L12Q9HB09 334 aa24.22■■□□□ 1.47
RNF4-204ENST00000503659 GIGYF1O75420 1035 aaPredicted RBP24.21■■□□□ 1.47
RNF4-204ENST00000503659 C1QTNF8P60827 252 aa24.21■■□□□ 1.47
RNF4-204ENST00000503659 WWC3Q9ULE0 1092 aa24.21■■□□□ 1.47
RNF4-204ENST00000503659 PRAMEF22A3QJZ6 481 aa24.2■■□□□ 1.46
RNF4-204ENST00000503659 POLRMTO00411 1230 aaKnown RBP24.2■■□□□ 1.46
RNF4-204ENST00000503659 TAF7Q15545 349 aaPredicted RBP24.2■■□□□ 1.46
RNF4-204ENST00000503659 PRKRIP1Q9H875 184 aaPredicted RBP24.2■■□□□ 1.46
RNF4-204ENST00000503659 ADCY9O60503 1353 aa24.19■■□□□ 1.46
RNF4-204ENST00000503659 A1BGP04217 495 aa24.19■■□□□ 1.46
RNF4-204ENST00000503659 THUMPD2Q9BTF0 503 aaKnown RBP24.19■■□□□ 1.46
RNF4-204ENST00000503659 ATP10DQ9P241 1426 aa24.18■■□□□ 1.46
RNF4-204ENST00000503659 A0A0G2JLW4 131 aa24.18■■□□□ 1.46
RNF4-204ENST00000503659 IL6STP40189 918 aaPredicted RBP24.18■■□□□ 1.46
RNF4-204ENST00000503659 MIS18AQ9NYP9 233 aa24.18■■□□□ 1.46
RNF4-204ENST00000503659 USP16Q9Y5T5 823 aa24.18■■□□□ 1.46
RNF4-204ENST00000503659 DPEP1P16444 411 aa24.17■■□□□ 1.46
RNF4-204ENST00000503659 NFIXQ14938 502 aa24.17■■□□□ 1.46
RNF4-204ENST00000503659 A0A087WZG4 1122 aa24.16■■□□□ 1.46
RNF4-204ENST00000503659 SNRPA1P09661 255 aaKnown RBP24.16■■□□□ 1.46
RNF4-204ENST00000503659 BCS1LQ9Y276 419 aa24.16■■□□□ 1.46
RNF4-204ENST00000503659 ARFGEF1Q9Y6D6 1849 aa24.15■■□□□ 1.46
RNF4-204ENST00000503659 DLEC1Q9Y238 1755 aa24.14■■□□□ 1.46
RNF4-204ENST00000503659 ZNF330Q9Y3S2 320 aaPredicted RBP24.14■■□□□ 1.45
RNF4-204ENST00000503659 KCNA3P22001 575 aa24.13■■□□□ 1.45
RNF4-204ENST00000503659 PIP4K2AP48426 406 aaPredicted RBP24.13■■□□□ 1.45
RNF4-204ENST00000503659 GPBP1L1Q9HC44 474 aaPredicted RBP24.13■■□□□ 1.45
RNF4-204ENST00000503659 PIM2Q9P1W9 311 aa24.13■■□□□ 1.45
RNF4-204ENST00000503659 TBC1D2BQ9UPU7 963 aa24.13■■□□□ 1.45
RNF4-204ENST00000503659 TMPOP42166 694 aaKnown RBP24.12■■□□□ 1.45
RNF4-204ENST00000503659 CCDC146Q8IYE0 955 aa24.12■■□□□ 1.45
RNF4-204ENST00000503659 PNISRQ8TF01 805 aaKnown RBP24.12■■□□□ 1.45
RNF4-204ENST00000503659 ANKRD31Q8N7Z5 1873 aa24.12■■□□□ 1.45
RNF4-204ENST00000503659 RIPK4P57078 832 aa24.11■■□□□ 1.45
RNF4-204ENST00000503659 NBPF26B4DH59 902 aa24.1■■□□□ 1.45
RNF4-204ENST00000503659 CAMTA2O94983 1202 aa24.1■■□□□ 1.45
RNF4-204ENST00000503659 WDR43Q15061 677 aaKnown RBP eCLIP24.1■■□□□ 1.45
RNF4-204ENST00000503659 NBPF10Q6P3W6 841 aaKnown RBP24.1■■□□□ 1.45
RNF4-204ENST00000503659 NBPF15Q8N660 670 aa24.1■■□□□ 1.45
RNF4-204ENST00000503659 CARMIL3Q8ND23 1372 aa24.09■■□□□ 1.45
RNF4-204ENST00000503659 SERPINB2P05120 415 aa24.09■■□□□ 1.45
RNF4-204ENST00000503659 EIF4A1P60842 406 aaKnown RBP24.09■■□□□ 1.45
RNF4-204ENST00000503659 TBC1D9BQ66K14 1250 aa24.09■■□□□ 1.45
RNF4-204ENST00000503659 ADAMTS8Q9UP79 889 aa24.09■■□□□ 1.45
RNF4-204ENST00000503659 DALRD3Q5D0E6 543 aaKnown RBP24.08■■□□□ 1.45
RNF4-204ENST00000503659 BICDL1Q6ZP65 573 aa24.08■■□□□ 1.45
RNF4-204ENST00000503659 RRP7AQ9Y3A4 280 aaKnown RBP24.08■■□□□ 1.45
RNF4-204ENST00000503659 CHRNA5P30532 468 aa24.07■■□□□ 1.44
RNF4-204ENST00000503659 ARHGAP27Q6ZUM4 889 aa24.07■■□□□ 1.44
RNF4-204ENST00000503659 DZIP3Q86Y13 1208 aaKnown RBP24.07■■□□□ 1.44
RNF4-204ENST00000503659 RUNDC1Q96C34 613 aa24.07■■□□□ 1.44
RNF4-204ENST00000503659 SENP3-EIF4A1A0A087X0R7 540 aa24.06■■□□□ 1.44
RNF4-204ENST00000503659 COL11A2P13942 1736 aaPredicted RBP24.06■■□□□ 1.44
RNF4-204ENST00000503659 LMOD3Q0VAK6 560 aa24.05■■□□□ 1.44
RNF4-204ENST00000503659 NPM2Q86SE8 214 aaKnown RBP24.05■■□□□ 1.44
RNF4-204ENST00000503659 TSPYL4Q9UJ04 414 aa24.04■■□□□ 1.44
RNF4-204ENST00000503659 NEUROD2Q15784 382 aa24.03■■□□□ 1.44
RNF4-204ENST00000503659 TRIM35Q9UPQ4 493 aa24.03■■□□□ 1.44
RNF4-204ENST00000503659 ZNF316A6NFI3 1004 aaPredicted RBP24.02■■□□□ 1.44
RNF4-204ENST00000503659 ZNF526Q8TF50 670 aaPredicted RBP24.02■■□□□ 1.44
RNF4-204ENST00000503659 NUP98P52948 1817 aa24.01■■□□□ 1.43
RNF4-204ENST00000503659 PRR5LQ6MZQ0 368 aa24.01■■□□□ 1.43
RNF4-204ENST00000503659 BABAM1Q9NWV8 329 aa24.01■■□□□ 1.43
RNF4-204ENST00000503659 PDZRN3Q9UPQ7 1066 aa24■■□□□ 1.43
RNF4-204ENST00000503659 CLEC4GQ6UXB4 293 aa23.99■■□□□ 1.43
RNF4-204ENST00000503659 SETDB2Q96T68 719 aa23.99■■□□□ 1.43
RNF4-204ENST00000503659 RGL2O15211 777 aa23.98■■□□□ 1.43
RNF4-204ENST00000503659 CCDC184Q52MB2 194 aa23.98■■□□□ 1.43
RNF4-204ENST00000503659 SBF1O95248 1867 aa23.97■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms