RNA–Protein interactions for RNA: ENST00000503628.5

DDR1-250, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-250ENST00000503628 ZC3H4Q9UPT8 1303 aaKnown RBP21.63■■□□□ 1.05
DDR1-250ENST00000503628 CCDC88AQ3V6T2 1871 aa21.63■■□□□ 1.05
DDR1-250ENST00000503628 GLTPD2A6NH11 291 aa21.63■■□□□ 1.05
DDR1-250ENST00000503628 LMNB1P20700 586 aa21.63■■□□□ 1.05
DDR1-250ENST00000503628 DNAJC10Q8IXB1 793 aa21.63■■□□□ 1.05
DDR1-250ENST00000503628 SCN11AQ9UI33 1791 aa21.61■■□□□ 1.05
DDR1-250ENST00000503628 HSPA1AP0DMV8 641 aaKnown RBP21.61■■□□□ 1.05
DDR1-250ENST00000503628 HSPA1BP0DMV9 641 aaKnown RBP21.61■■□□□ 1.05
DDR1-250ENST00000503628 NFIXQ14938 502 aa21.61■■□□□ 1.05
DDR1-250ENST00000503628 SULT6B1Q6IMI4 303 aa21.61■■□□□ 1.05
DDR1-250ENST00000503628 SOS1Q07889 1333 aaPredicted RBP21.6■■□□□ 1.05
DDR1-250ENST00000503628 TTLL6Q8N841 843 aa21.59■■□□□ 1.05
DDR1-250ENST00000503628 NARFQ9UHQ1 456 aa21.59■■□□□ 1.05
DDR1-250ENST00000503628 SERPINB2P05120 415 aa21.58■■□□□ 1.05
DDR1-250ENST00000503628 CYP19A1P11511 503 aaPredicted RBP21.58■■□□□ 1.05
DDR1-250ENST00000503628 NRXN2Q9P2S2 1712 aa21.58■■□□□ 1.04
DDR1-250ENST00000503628 DLEC1Q9Y238 1755 aa21.57■■□□□ 1.04
DDR1-250ENST00000503628 PANK3Q9H999 370 aa21.57■■□□□ 1.04
DDR1-250ENST00000503628 LGR6Q9HBX8 967 aa21.57■■□□□ 1.04
DDR1-250ENST00000503628 TIAM2Q8IVF5 1701 aa21.56■■□□□ 1.04
DDR1-250ENST00000503628 POTECB2RU33 542 aa21.56■■□□□ 1.04
DDR1-250ENST00000503628 SLC39A6Q13433 755 aa21.56■■□□□ 1.04
DDR1-250ENST00000503628 C2CD5Q86YS7 1000 aa21.56■■□□□ 1.04
DDR1-250ENST00000503628 SLC52A2Q9HAB3 445 aa21.56■■□□□ 1.04
DDR1-250ENST00000503628 BCL2L12Q9HB09 334 aa21.56■■□□□ 1.04
DDR1-250ENST00000503628 NFKBIEO00221 500 aa21.55■■□□□ 1.04
DDR1-250ENST00000503628 AKAP4Q5JQC9 854 aa21.55■■□□□ 1.04
DDR1-250ENST00000503628 COL15A1P39059 1388 aa21.55■■□□□ 1.04
DDR1-250ENST00000503628 H0YIN7 160 aa21.54■■□□□ 1.04
DDR1-250ENST00000503628 MORC1Q86VD1 984 aa21.54■■□□□ 1.04
DDR1-250ENST00000503628 ZBTB1Q9Y2K1 713 aa21.54■■□□□ 1.04
DDR1-250ENST00000503628 IL13P35225 146 aa21.53■■□□□ 1.04
DDR1-250ENST00000503628 DPY19L2Q6NUT2 758 aa21.52■■□□□ 1.04
DDR1-250ENST00000503628 CARMIL3Q8ND23 1372 aa21.51■■□□□ 1.03
DDR1-250ENST00000503628 VIRMAQ69YN4 1812 aaKnown RBP21.51■■□□□ 1.03
DDR1-250ENST00000503628 RNMTO43148 476 aaKnown RBP21.51■■□□□ 1.03
DDR1-250ENST00000503628 BICDL1Q6ZP65 573 aa21.5■■□□□ 1.03
DDR1-250ENST00000503628 CANXP27824 592 aaKnown RBP21.49■■□□□ 1.03
DDR1-250ENST00000503628 ZNF622Q969S3 477 aaKnown RBP eCLIP21.49■■□□□ 1.03
DDR1-250ENST00000503628 ZNF219Q9P2Y4 722 aaPredicted RBP21.49■■□□□ 1.03
DDR1-250ENST00000503628 DICER1Q9UPY3 1922 aaKnown RBP21.49■■□□□ 1.03
DDR1-250ENST00000503628 ERFEQ4G0M1 354 aa21.48■■□□□ 1.03
DDR1-250ENST00000503628 C21orf2O43822 256 aa21.47■■□□□ 1.03
DDR1-250ENST00000503628 EIF4G2P78344 907 aaKnown RBP eCLIP21.47■■□□□ 1.03
DDR1-250ENST00000503628 VSIG10Q8N0Z9 540 aa21.47■■□□□ 1.03
DDR1-250ENST00000503628 ANKRD31Q8N7Z5 1873 aa21.47■■□□□ 1.03
DDR1-250ENST00000503628 MRC1P22897 1456 aa21.46■■□□□ 1.03
DDR1-250ENST00000503628 CREBZFQ9NS37 354 aa21.46■■□□□ 1.03
DDR1-250ENST00000503628 MKRN1Q9UHC7 482 aaKnown RBP21.46■■□□□ 1.03
DDR1-250ENST00000503628 FER1L6Q2WGJ9 1857 aa21.45■■□□□ 1.02
DDR1-250ENST00000503628 HMOX1P09601 288 aa21.45■■□□□ 1.02
DDR1-250ENST00000503628 TBC1D9BQ66K14 1250 aa21.45■■□□□ 1.02
DDR1-250ENST00000503628 CHADLQ6NUI6 762 aa21.45■■□□□ 1.02
DDR1-250ENST00000503628 CCDC24Q8N4L8 307 aa21.45■■□□□ 1.02
DDR1-250ENST00000503628 POTEIP0CG38 1075 aa21.44■■□□□ 1.02
DDR1-250ENST00000503628 POTEJP0CG39 1038 aa21.44■■□□□ 1.02
DDR1-250ENST00000503628 EIF5P55010 431 aaKnown RBP21.44■■□□□ 1.02
DDR1-250ENST00000503628 BRIP1Q9BX63 1249 aa21.44■■□□□ 1.02
DDR1-250ENST00000503628 HSPA5P11021 654 aaKnown RBP21.43■■□□□ 1.02
DDR1-250ENST00000503628 PDE6BP35913 854 aa21.43■■□□□ 1.02
DDR1-250ENST00000503628 MTHFSDQ2M296 383 aaKnown RBP21.43■■□□□ 1.02
DDR1-250ENST00000503628 A0A087WZG4 1122 aa21.42■■□□□ 1.02
DDR1-250ENST00000503628 DDNO94850 711 aaPredicted RBP21.42■■□□□ 1.02
DDR1-250ENST00000503628 STARD3NLO95772 234 aa21.42■■□□□ 1.02
DDR1-250ENST00000503628 PDZRN3Q9UPQ7 1066 aa21.42■■□□□ 1.02
DDR1-250ENST00000503628 UBR2Q8IWV8 1755 aa21.41■■□□□ 1.02
DDR1-250ENST00000503628 PRR5LQ6MZQ0 368 aa21.41■■□□□ 1.02
DDR1-250ENST00000503628 KNSTRNQ9Y448 316 aa21.41■■□□□ 1.02
DDR1-250ENST00000503628 COL11A2P13942 1736 aaPredicted RBP21.41■■□□□ 1.02
DDR1-250ENST00000503628 FOXN1O15353 648 aa21.4■■□□□ 1.02
DDR1-250ENST00000503628 TAOK3Q9H2K8 898 aa21.4■■□□□ 1.02
DDR1-250ENST00000503628 TBC1D2BQ9UPU7 963 aa21.4■■□□□ 1.02
DDR1-250ENST00000503628 SLX4Q8IY92 1834 aa21.39■■□□□ 1.02
DDR1-250ENST00000503628 LTBP3Q9NS15 1303 aa21.39■■□□□ 1.01
DDR1-250ENST00000503628 TTC5Q8N0Z6 440 aa21.39■■□□□ 1.01
DDR1-250ENST00000503628 ZNF330Q9Y3S2 320 aaPredicted RBP21.39■■□□□ 1.01
DDR1-250ENST00000503628 CACNA1SQ13698 1873 aa21.38■■□□□ 1.01
DDR1-250ENST00000503628 ZNF496Q96IT1 587 aaPredicted RBP21.37■■□□□ 1.01
DDR1-250ENST00000503628 CNTNAP1P78357 1384 aa21.36■■□□□ 1.01
DDR1-250ENST00000503628 CNKSR1Q969H4 720 aa21.36■■□□□ 1.01
DDR1-250ENST00000503628 SCN7AQ01118 1682 aa21.36■■□□□ 1.01
DDR1-250ENST00000503628 STYK1Q6J9G0 422 aa21.35■■□□□ 1.01
DDR1-250ENST00000503628 PRPF40BQ6NWY9 871 aaKnown RBP21.35■■□□□ 1.01
DDR1-250ENST00000503628 SETDB2Q96T68 719 aa21.35■■□□□ 1.01
DDR1-250ENST00000503628 PRDM10Q9NQV6 1147 aa21.35■■□□□ 1.01
DDR1-250ENST00000503628 HEG1Q9ULI3 1381 aa21.35■■□□□ 1.01
DDR1-250ENST00000503628 PASKQ96RG2 1323 aa21.34■■□□□ 1.01
DDR1-250ENST00000503628 NPHP1O15259 732 aa21.34■■□□□ 1.01
DDR1-250ENST00000503628 SRGNP10124 158 aa21.34■■□□□ 1.01
DDR1-250ENST00000503628 AMER1Q5JTC6 1135 aaPredicted RBP21.34■■□□□ 1.01
DDR1-250ENST00000503628 LDHDQ86WU2 507 aa21.34■■□□□ 1.01
DDR1-250ENST00000503628 CNBD1Q8NA66 436 aa21.34■■□□□ 1.01
DDR1-250ENST00000503628 TEX13AQ9BXU3 409 aaPredicted RBP21.34■■□□□ 1.01
DDR1-250ENST00000503628 IQCA1LA6NCM1 817 aa21.33■■□□□ 1.01
DDR1-250ENST00000503628 A1BGP04217 495 aa21.33■■□□□ 1.01
DDR1-250ENST00000503628 IL6STP40189 918 aaPredicted RBP21.33■■□□□ 1.01
DDR1-250ENST00000503628 ZNF790Q6PG37 636 aa21.33■■□□□ 1.01
DDR1-250ENST00000503628 TAF1DQ9H5J8 278 aaPredicted RBP21.33■■□□□ 1.01
DDR1-250ENST00000503628 SCN4AP35499 1836 aa21.32■■□□□ 1
DDR1-250ENST00000503628 DIAPH1O60610 1272 aaKnown RBP21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms