RNA–Protein interactions for RNA: ENST00000503568.1

LINC01336-201, Transcript of long intergenic non-protein coding RNA 1336, humanhuman

TSL 4 BASIC

Gene LINC01336, Length 534 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01336-201ENST00000503568 PARP3Q9Y6F1 533 aa20.44■□□□□ 0.86
LINC01336-201ENST00000503568 STARD3NLO95772 234 aa20.43■□□□□ 0.86
LINC01336-201ENST00000503568 SOS1Q07889 1333 aaPredicted RBP20.43■□□□□ 0.86
LINC01336-201ENST00000503568 ZPR1O75312 459 aa20.42■□□□□ 0.86
LINC01336-201ENST00000503568 CANXP27824 592 aaKnown RBP20.42■□□□□ 0.86
LINC01336-201ENST00000503568 NFE2L2Q16236 605 aa20.42■□□□□ 0.86
LINC01336-201ENST00000503568 USP42Q9H9J4 1324 aaKnown RBP20.42■□□□□ 0.86
LINC01336-201ENST00000503568 COL15A1P39059 1388 aa20.4■□□□□ 0.86
LINC01336-201ENST00000503568 TGFB2P61812 414 aa20.4■□□□□ 0.86
LINC01336-201ENST00000503568 PRKRIP1Q9H875 184 aaPredicted RBP20.4■□□□□ 0.86
LINC01336-201ENST00000503568 FKBP8Q14318 412 aa20.39■□□□□ 0.85
LINC01336-201ENST00000503568 TAF7Q15545 349 aaPredicted RBP20.39■□□□□ 0.85
LINC01336-201ENST00000503568 USPL1Q5W0Q7 1092 aa20.39■□□□□ 0.85
LINC01336-201ENST00000503568 YBX3P16989 372 aaKnown RBP eCLIP20.38■□□□□ 0.85
LINC01336-201ENST00000503568 WDR43Q15061 677 aaKnown RBP eCLIP20.38■□□□□ 0.85
LINC01336-201ENST00000503568 NPM2Q86SE8 214 aaKnown RBP20.38■□□□□ 0.85
LINC01336-201ENST00000503568 ZNF784Q8NCA9 323 aaPredicted RBP20.37■□□□□ 0.85
LINC01336-201ENST00000503568 MIS18AQ9NYP9 233 aa20.37■□□□□ 0.85
LINC01336-201ENST00000503568 NARFQ9UHQ1 456 aa20.37■□□□□ 0.85
LINC01336-201ENST00000503568 ZNF330Q9Y3S2 320 aaPredicted RBP20.37■□□□□ 0.85
LINC01336-201ENST00000503568 A0A087WZG4 1122 aa20.36■□□□□ 0.85
LINC01336-201ENST00000503568 THUMPD2Q9BTF0 503 aaKnown RBP20.36■□□□□ 0.85
LINC01336-201ENST00000503568 WWC3Q9ULE0 1092 aa20.36■□□□□ 0.85
LINC01336-201ENST00000503568 KIF13BQ9NQT8 1826 aa20.35■□□□□ 0.85
LINC01336-201ENST00000503568 A1BGP04217 495 aa20.35■□□□□ 0.85
LINC01336-201ENST00000503568 EIF5P55010 431 aaKnown RBP20.35■□□□□ 0.85
LINC01336-201ENST00000503568 USP16Q9Y5T5 823 aa20.35■□□□□ 0.85
LINC01336-201ENST00000503568 PRAMEF22A3QJZ6 481 aa20.34■□□□□ 0.85
LINC01336-201ENST00000503568 ZNF316A6NFI3 1004 aaPredicted RBP20.34■□□□□ 0.85
LINC01336-201ENST00000503568 SNRPA1P09661 255 aaKnown RBP20.34■□□□□ 0.85
LINC01336-201ENST00000503568 RIPK4P57078 832 aa20.34■□□□□ 0.85
LINC01336-201ENST00000503568 CCDC146Q8IYE0 955 aa20.34■□□□□ 0.85
LINC01336-201ENST00000503568 PNISRQ8TF01 805 aaKnown RBP20.34■□□□□ 0.85
LINC01336-201ENST00000503568 DDR1Q08345 913 aa20.33■□□□□ 0.85
LINC01336-201ENST00000503568 C10orf71Q711Q0 1435 aa20.33■□□□□ 0.84
LINC01336-201ENST00000503568 N4BP2Q86UW6 1770 aaPredicted RBP20.33■□□□□ 0.84
LINC01336-201ENST00000503568 TM4SF1P30408 202 aa20.32■□□□□ 0.84
LINC01336-201ENST00000503568 IL6STP40189 918 aaPredicted RBP20.32■□□□□ 0.84
LINC01336-201ENST00000503568 TMPOP42166 694 aaKnown RBP20.32■□□□□ 0.84
LINC01336-201ENST00000503568 KDM3BQ7LBC6 1761 aa20.31■□□□□ 0.84
LINC01336-201ENST00000503568 POLRMTO00411 1230 aaKnown RBP20.31■□□□□ 0.84
LINC01336-201ENST00000503568 PIP4K2AP48426 406 aaPredicted RBP20.31■□□□□ 0.84
LINC01336-201ENST00000503568 BCL2L12Q9HB09 334 aa20.31■□□□□ 0.84
LINC01336-201ENST00000503568 ADAMTS8Q9UP79 889 aa20.31■□□□□ 0.84
LINC01336-201ENST00000503568 TBC1D2BQ9UPU7 963 aa20.31■□□□□ 0.84
LINC01336-201ENST00000503568 RRP7AQ9Y3A4 280 aaKnown RBP20.31■□□□□ 0.84
LINC01336-201ENST00000503568 A0A0G2JLW4 131 aa20.3■□□□□ 0.84
LINC01336-201ENST00000503568 NFIXQ14938 502 aa20.3■□□□□ 0.84
LINC01336-201ENST00000503568 NEUROD2Q15784 382 aa20.3■□□□□ 0.84
LINC01336-201ENST00000503568 RUNDC1Q96C34 613 aa20.3■□□□□ 0.84
LINC01336-201ENST00000503568 PXDNLA1KZ92 1463 aa20.3■□□□□ 0.84
LINC01336-201ENST00000503568 LMOD3Q0VAK6 560 aa20.29■□□□□ 0.84
LINC01336-201ENST00000503568 KIAA1551Q9HCM1 1747 aa20.29■□□□□ 0.84
LINC01336-201ENST00000503568 AFDNP55196 1824 aaKnown RBP20.28■□□□□ 0.84
LINC01336-201ENST00000503568 UTRNP46939 3433 aa20.28■□□□□ 0.84
LINC01336-201ENST00000503568 BICDL1Q6ZP65 573 aa20.28■□□□□ 0.84
LINC01336-201ENST00000503568 SCN7AQ01118 1682 aa20.27■□□□□ 0.84
LINC01336-201ENST00000503568 DPEP1P16444 411 aa20.27■□□□□ 0.84
LINC01336-201ENST00000503568 DZIP3Q86Y13 1208 aaKnown RBP20.27■□□□□ 0.84
LINC01336-201ENST00000503568 PIM2Q9P1W9 311 aa20.27■□□□□ 0.84
LINC01336-201ENST00000503568 TSPYL4Q9UJ04 414 aa20.27■□□□□ 0.84
LINC01336-201ENST00000503568 BCS1LQ9Y276 419 aa20.27■□□□□ 0.84
LINC01336-201ENST00000503568 LAMB4A4D0S4 1761 aa20.26■□□□□ 0.83
LINC01336-201ENST00000503568 SERPINB2P05120 415 aa20.26■□□□□ 0.83
LINC01336-201ENST00000503568 EIF4A1P60842 406 aaKnown RBP20.26■□□□□ 0.83
LINC01336-201ENST00000503568 GOLGB1Q14789 3259 aaKnown RBP20.25■□□□□ 0.83
LINC01336-201ENST00000503568 TBC1D9BQ66K14 1250 aa20.25■□□□□ 0.83
LINC01336-201ENST00000503568 GIGYF1O75420 1035 aaPredicted RBP20.24■□□□□ 0.83
LINC01336-201ENST00000503568 CAMTA2O94983 1202 aa20.24■□□□□ 0.83
LINC01336-201ENST00000503568 NBPF26B4DH59 902 aa20.23■□□□□ 0.83
LINC01336-201ENST00000503568 NBPF10Q6P3W6 841 aaKnown RBP20.23■□□□□ 0.83
LINC01336-201ENST00000503568 NBPF15Q8N660 670 aa20.23■□□□□ 0.83
LINC01336-201ENST00000503568 NRXN2Q9P2S2 1712 aa20.23■□□□□ 0.83
LINC01336-201ENST00000503568 BCORQ6W2J9 1755 aa20.23■□□□□ 0.83
LINC01336-201ENST00000503568 BRCA1P38398 1863 aaKnown RBP20.22■□□□□ 0.83
LINC01336-201ENST00000503568 CHRNA5P30532 468 aa20.22■□□□□ 0.83
LINC01336-201ENST00000503568 DALRD3Q5D0E6 543 aaKnown RBP20.22■□□□□ 0.83
LINC01336-201ENST00000503568 KCNA3P22001 575 aa20.21■□□□□ 0.83
LINC01336-201ENST00000503568 ARHGAP27Q6ZUM4 889 aa20.21■□□□□ 0.83
LINC01336-201ENST00000503568 TRIM35Q9UPQ4 493 aa20.21■□□□□ 0.83
LINC01336-201ENST00000503568 LAS1LQ9Y4W2 734 aaKnown RBP20.21■□□□□ 0.83
LINC01336-201ENST00000503568 ANP32CO43423 234 aa20.2■□□□□ 0.82
LINC01336-201ENST00000503568 NGEFQ8N5V2 710 aa20.2■□□□□ 0.82
LINC01336-201ENST00000503568 SETDB2Q96T68 719 aa20.2■□□□□ 0.82
LINC01336-201ENST00000503568 BABAM1Q9NWV8 329 aa20.2■□□□□ 0.82
LINC01336-201ENST00000503568 PDZRN3Q9UPQ7 1066 aa20.2■□□□□ 0.82
LINC01336-201ENST00000503568 CCDC184Q52MB2 194 aa20.19■□□□□ 0.82
LINC01336-201ENST00000503568 CLEC4GQ6UXB4 293 aa20.19■□□□□ 0.82
LINC01336-201ENST00000503568 ZNF652Q9Y2D9 606 aa20.19■□□□□ 0.82
LINC01336-201ENST00000503568 CARMIL3Q8ND23 1372 aa20.19■□□□□ 0.82
LINC01336-201ENST00000503568 NPHP1O15259 732 aa20.18■□□□□ 0.82
LINC01336-201ENST00000503568 MYL6BP14649 208 aa20.18■□□□□ 0.82
LINC01336-201ENST00000503568 GPBP1L1Q9HC44 474 aaPredicted RBP20.18■□□□□ 0.82
LINC01336-201ENST00000503568 H0YIN7 160 aa20.17■□□□□ 0.82
LINC01336-201ENST00000503568 APAF1O14727 1248 aa20.17■□□□□ 0.82
LINC01336-201ENST00000503568 RGL2O15211 777 aa20.17■□□□□ 0.82
LINC01336-201ENST00000503568 CCDC24Q8N4L8 307 aa20.17■□□□□ 0.82
LINC01336-201ENST00000503568 ARFGEF1Q9Y6D6 1849 aa20.16■□□□□ 0.82
LINC01336-201ENST00000503568 EIF2S2P20042 333 aaKnown RBP20.16■□□□□ 0.82
LINC01336-201ENST00000503568 PDE6BP35913 854 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms