RNA–Protein interactions for RNA: ENST00000503084.1

TNPO1-202, Transcript of transportin 1, humanhuman

TSL 2

Gene TNPO1, Length 623 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-202ENST00000503084 DEFB115Q30KQ5 88 aa16.22■□□□□ 0.19
TNPO1-202ENST00000503084 TSKSQ9UJT2 592 aa16.22■□□□□ 0.19
TNPO1-202ENST00000503084 SPG7Q9UQ90 795 aa16.22■□□□□ 0.19
TNPO1-202ENST00000503084 FLT4P35916 1363 aa16.22■□□□□ 0.19
TNPO1-202ENST00000503084 ADAMTSL1Q8N6G6 1762 aa16.21■□□□□ 0.19
TNPO1-202ENST00000503084 FER1L6Q2WGJ9 1857 aa16.21■□□□□ 0.19
TNPO1-202ENST00000503084 TAF1DQ9H5J8 278 aaPredicted RBP16.21■□□□□ 0.19
TNPO1-202ENST00000503084 PHKG2P15735 406 aa16.2■□□□□ 0.18
TNPO1-202ENST00000503084 TM4SF1P30408 202 aa16.2■□□□□ 0.18
TNPO1-202ENST00000503084 CRKLP46109 303 aaKnown RBP16.2■□□□□ 0.18
TNPO1-202ENST00000503084 CARMIL3Q8ND23 1372 aa16.2■□□□□ 0.18
TNPO1-202ENST00000503084 SCN4AP35499 1836 aa16.19■□□□□ 0.18
TNPO1-202ENST00000503084 IQCA1LA6NCM1 817 aa16.19■□□□□ 0.18
TNPO1-202ENST00000503084 PRPF38BQ5VTL8 546 aaKnown RBP16.19■□□□□ 0.18
TNPO1-202ENST00000503084 ABT1Q9ULW3 272 aaKnown RBP16.19■□□□□ 0.18
TNPO1-202ENST00000503084 EAPPQ56P03 285 aaPredicted RBP16.18■□□□□ 0.18
TNPO1-202ENST00000503084 C2CD5Q86YS7 1000 aa16.18■□□□□ 0.18
TNPO1-202ENST00000503084 L3MBTL2Q969R5 705 aa16.18■□□□□ 0.18
TNPO1-202ENST00000503084 BEGAINQ9BUH8 593 aa16.18■□□□□ 0.18
TNPO1-202ENST00000503084 TJP1Q07157 1748 aa16.18■□□□□ 0.18
TNPO1-202ENST00000503084 L3MBTL3Q96JM7 780 aaPredicted RBP16.17■□□□□ 0.18
TNPO1-202ENST00000503084 COL11A2P13942 1736 aaPredicted RBP16.16■□□□□ 0.18
TNPO1-202ENST00000503084 IFNL2Q8IZJ0 200 aa16.16■□□□□ 0.18
TNPO1-202ENST00000503084 CAPNS2Q96L46 248 aa16.16■□□□□ 0.18
TNPO1-202ENST00000503084 ZNF219Q9P2Y4 722 aaPredicted RBP16.16■□□□□ 0.18
TNPO1-202ENST00000503084 KIF24Q5T7B8 1368 aa16.15■□□□□ 0.18
TNPO1-202ENST00000503084 CASP8AP2Q9UKL3 1982 aa16.15■□□□□ 0.18
TNPO1-202ENST00000503084 NFIXQ14938 502 aa16.15■□□□□ 0.18
TNPO1-202ENST00000503084 GGNBP2Q9H3C7 697 aa16.15■□□□□ 0.18
TNPO1-202ENST00000503084 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.15■□□□□ 0.183e-7■□□□□ 8.4
TNPO1-202ENST00000503084 LTBP3Q9NS15 1303 aa16.15■□□□□ 0.18
TNPO1-202ENST00000503084 TONSLQ96HA7 1378 aa16.14■□□□□ 0.17
TNPO1-202ENST00000503084 C21orf2O43822 256 aa16.14■□□□□ 0.17
TNPO1-202ENST00000503084 GRM1Q13255 1194 aa16.14■□□□□ 0.17
TNPO1-202ENST00000503084 USPL1Q5W0Q7 1092 aa16.14■□□□□ 0.17
TNPO1-202ENST00000503084 MAP1SQ66K74 1059 aaPredicted RBP16.14■□□□□ 0.17
TNPO1-202ENST00000503084 PAXIP1Q6ZW49 1069 aaPredicted RBP16.14■□□□□ 0.17
TNPO1-202ENST00000503084 TAOK3Q9H2K8 898 aa16.14■□□□□ 0.17
TNPO1-202ENST00000503084 H0YIN7 160 aa16.13■□□□□ 0.17
TNPO1-202ENST00000503084 SOX10P56693 466 aa16.13■□□□□ 0.17
TNPO1-202ENST00000503084 DGKZQ13574 1117 aa16.13■□□□□ 0.17
TNPO1-202ENST00000503084 CLEC11AQ9Y240 323 aa16.13■□□□□ 0.17
TNPO1-202ENST00000503084 ANKRD31Q8N7Z5 1873 aa16.13■□□□□ 0.17
TNPO1-202ENST00000503084 PTCD1O75127 700 aaKnown RBP16.12■□□□□ 0.17
TNPO1-202ENST00000503084 CYP4F22Q6NT55 531 aa16.12■□□□□ 0.17
TNPO1-202ENST00000503084 CNTROBQ8N137 903 aa16.12■□□□□ 0.17
TNPO1-202ENST00000503084 GPR101Q96P66 508 aaPredicted RBP16.12■□□□□ 0.17
TNPO1-202ENST00000503084 FYB1O15117 783 aa16.11■□□□□ 0.17
TNPO1-202ENST00000503084 ZPR1O75312 459 aa16.11■□□□□ 0.17
TNPO1-202ENST00000503084 EMILIN1Q9Y6C2 1016 aa16.11■□□□□ 0.17
TNPO1-202ENST00000503084 ZNF541Q9H0D2 1346 aa16.11■□□□□ 0.17
TNPO1-202ENST00000503084 KIF20BQ96Q89 1820 aa16.1■□□□□ 0.17
TNPO1-202ENST00000503084 ERVV-2B6SEH9 535 aa16.1■□□□□ 0.17
TNPO1-202ENST00000503084 SERPINB2P05120 415 aa16.1■□□□□ 0.17
TNPO1-202ENST00000503084 EPHX2P34913 555 aa16.1■□□□□ 0.17
TNPO1-202ENST00000503084 ECE1P42892 770 aa16.1■□□□□ 0.17
TNPO1-202ENST00000503084 INTS5Q6P9B9 1019 aaKnown RBP16.1■□□□□ 0.17
TNPO1-202ENST00000503084 HACL1Q9UJ83 578 aa16.1■□□□□ 0.17
TNPO1-202ENST00000503084 ANKRD26Q9UPS8 1709 aa16.1■□□□□ 0.17
TNPO1-202ENST00000503084 ZNF622Q969S3 477 aaKnown RBP eCLIP16.09■□□□□ 0.17
TNPO1-202ENST00000503084 PUS7Q96PZ0 661 aaKnown RBP16.09■□□□□ 0.17
TNPO1-202ENST00000503084 SOS1Q07889 1333 aaPredicted RBP16.09■□□□□ 0.17
TNPO1-202ENST00000503084 AOC2O75106 756 aa16.08■□□□□ 0.16
TNPO1-202ENST00000503084 EYA1Q99502 592 aa16.08■□□□□ 0.16
TNPO1-202ENST00000503084 DDX21Q9NR30 783 aaKnown RBP eCLIP16.08■□□□□ 0.16
TNPO1-202ENST00000503084 CACNA1SQ13698 1873 aa16.08■□□□□ 0.16
TNPO1-202ENST00000503084 FMR1Q06787 632 aaKnown RBP eCLIP16.07■□□□□ 0.16
TNPO1-202ENST00000503084 BCL2L12Q9HB09 334 aa16.07■□□□□ 0.16
TNPO1-202ENST00000503084 SLX4Q8IY92 1834 aa16.06■□□□□ 0.16
TNPO1-202ENST00000503084 COL15A1P39059 1388 aa16.06■□□□□ 0.16
TNPO1-202ENST00000503084 RNF123Q5XPI4 1314 aa16.06■□□□□ 0.16
TNPO1-202ENST00000503084 CA12O43570 354 aa16.06■□□□□ 0.16
TNPO1-202ENST00000503084 CABP4P57796 275 aa16.05■□□□□ 0.16
TNPO1-202ENST00000503084 NARFQ9UHQ1 456 aa16.05■□□□□ 0.16
TNPO1-202ENST00000503084 ARFGEF2Q9Y6D5 1785 aa16.05■□□□□ 0.16
TNPO1-202ENST00000503084 PNMA8AQ86V59 439 aaPredicted RBP16.04■□□□□ 0.16
TNPO1-202ENST00000503084 CARD11Q9BXL7 1154 aa16.04■□□□□ 0.16
TNPO1-202ENST00000503084 MAP2K2P36507 400 aa16.03■□□□□ 0.16
TNPO1-202ENST00000503084 PRPF40BQ6NWY9 871 aaKnown RBP16.03■□□□□ 0.16
TNPO1-202ENST00000503084 TRPM7Q96QT4 1865 aa16.03■□□□□ 0.16
TNPO1-202ENST00000503084 PPM1GO15355 546 aaPredicted RBP16.02■□□□□ 0.16
TNPO1-202ENST00000503084 HSP90AB1P08238 724 aaKnown RBP16.02■□□□□ 0.16
TNPO1-202ENST00000503084 DNAJC10Q8IXB1 793 aa16.02■□□□□ 0.16
TNPO1-202ENST00000503084 CCDC24Q8N4L8 307 aa16.02■□□□□ 0.16
TNPO1-202ENST00000503084 TLL2Q9Y6L7 1015 aa16.02■□□□□ 0.16
TNPO1-202ENST00000503084 CST9Q5W186 159 aa16.01■□□□□ 0.15
TNPO1-202ENST00000503084 BICDL1Q6ZP65 573 aa16.01■□□□□ 0.15
TNPO1-202ENST00000503084 TRAF5O00463 557 aa16■□□□□ 0.15
TNPO1-202ENST00000503084 PDE6BP35913 854 aa16■□□□□ 0.15
TNPO1-202ENST00000503084 BRPF1P55201 1214 aaPredicted RBP16■□□□□ 0.15
TNPO1-202ENST00000503084 BRIP1Q9BX63 1249 aa16■□□□□ 0.15
TNPO1-202ENST00000503084 PDZRN3Q9UPQ7 1066 aa16■□□□□ 0.15
TNPO1-202ENST00000503084 SOGA3Q5TF21 947 aa15.99■□□□□ 0.15
TNPO1-202ENST00000503084 ZBTB1Q9Y2K1 713 aa15.99■□□□□ 0.15
TNPO1-202ENST00000503084 SCN7AQ01118 1682 aa15.99■□□□□ 0.15
TNPO1-202ENST00000503084 WASHC2AQ641Q2 1341 aa15.98■□□□□ 0.15
TNPO1-202ENST00000503084 PRR5LQ6MZQ0 368 aa15.98■□□□□ 0.15
TNPO1-202ENST00000503084 ZNF530Q6P9A1 599 aaPredicted RBP15.98■□□□□ 0.15
TNPO1-202ENST00000503084 TESK2Q96S53 571 aa15.98■□□□□ 0.15
TNPO1-202ENST00000503084 ZNF277Q9NRM2 450 aaPredicted RBP15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms