RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 BCL9LQ86UU0 1499 aa27.55■■■□□ 2
PTPN13-205ENST00000502971 PRAMEF22A3QJZ6 481 aa27.55■■■□□ 2
PTPN13-205ENST00000502971 DDX21Q9NR30 783 aaKnown RBP eCLIP27.55■■■□□ 2
PTPN13-205ENST00000502971 GNAI2P04899 355 aa27.54■■■□□ 2
PTPN13-205ENST00000502971 SNRPA1P09661 255 aaKnown RBP27.54■■■□□ 2
PTPN13-205ENST00000502971 ZNF496Q96IT1 587 aaPredicted RBP27.54■■■□□ 2
PTPN13-205ENST00000502971 DNAAF4Q8WXU2 420 aa27.53■■■□□ 2
PTPN13-205ENST00000502971 DCTPP1Q9H773 170 aa27.53■■■□□ 2
PTPN13-205ENST00000502971 DDX54Q8TDD1 881 aaKnown RBP27.53■■■□□ 2
PTPN13-205ENST00000502971 USP35Q9P2H5 1018 aa27.53■■■□□ 2
PTPN13-205ENST00000502971 DISP2A7MBM2 1401 aa27.52■■■□□ 2
PTPN13-205ENST00000502971 C5P01031 1676 aa27.52■■■□□ 2
PTPN13-205ENST00000502971 SPATA31A1Q5TZJ5 1347 aa27.52■■■□□ 2
PTPN13-205ENST00000502971 SRCIN1Q9C0H9 1055 aa27.52■■■□□ 2
PTPN13-205ENST00000502971 USP21Q9UK80 565 aa27.52■■■□□ 2
PTPN13-205ENST00000502971 SPATA31A5Q5VU36 1347 aa27.51■■□□□ 1.99
PTPN13-205ENST00000502971 SPATA31A7Q8IWB4 1347 aa27.51■■□□□ 1.99
PTPN13-205ENST00000502971 PI4KAP2A4QPH2 592 aa27.51■■□□□ 1.99
PTPN13-205ENST00000502971 HMMRO75330 724 aa27.51■■□□□ 1.99
PTPN13-205ENST00000502971 ANXA1P04083 346 aa27.51■■□□□ 1.99
PTPN13-205ENST00000502971 VPS72Q15906 364 aa27.51■■□□□ 1.99
PTPN13-205ENST00000502971 ANKRD45Q5TZF3 282 aa27.51■■□□□ 1.99
PTPN13-205ENST00000502971 PI4KAP1Q8N8J0 262 aa27.51■■□□□ 1.99
PTPN13-205ENST00000502971 CDCA7Q9BWT1 371 aaPredicted RBP27.51■■□□□ 1.99
PTPN13-205ENST00000502971 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.51■■□□□ 1.99
PTPN13-205ENST00000502971 ADCY9O60503 1353 aa27.5■■□□□ 1.99
PTPN13-205ENST00000502971 ANP32AP39687 249 aaKnown RBP27.5■■□□□ 1.99
PTPN13-205ENST00000502971 PDIA6Q15084 440 aa27.5■■□□□ 1.99
PTPN13-205ENST00000502971 PROSER3Q2NL68 480 aa27.5■■□□□ 1.99
PTPN13-205ENST00000502971 BEND3Q5T5X7 828 aa27.49■■□□□ 1.99
PTPN13-205ENST00000502971 KSR2Q6VAB6 950 aa27.49■■□□□ 1.99
PTPN13-205ENST00000502971 LNPKQ9C0E8 428 aa27.49■■□□□ 1.99
PTPN13-205ENST00000502971 DDX58O95786 925 aaKnown RBP27.48■■□□□ 1.99
PTPN13-205ENST00000502971 USP44Q9H0E7 712 aa27.48■■□□□ 1.99
PTPN13-205ENST00000502971 AFF2P51816 1311 aa27.46■■□□□ 1.99
PTPN13-205ENST00000502971 PAPPAQ13219 1627 aa27.46■■□□□ 1.99
PTPN13-205ENST00000502971 BARGINQ6ZT62 677 aa27.46■■□□□ 1.99
PTPN13-205ENST00000502971 UBTFL1P0CB47 393 aaPredicted RBP27.45■■□□□ 1.99
PTPN13-205ENST00000502971 CCDC9Q9Y3X0 531 aaKnown RBP27.45■■□□□ 1.99
PTPN13-205ENST00000502971 MAP3K2Q9Y2U5 619 aa27.44■■□□□ 1.98
PTPN13-205ENST00000502971 USP16Q9Y5T5 823 aa27.44■■□□□ 1.98
PTPN13-205ENST00000502971 UBR2Q8IWV8 1755 aa27.44■■□□□ 1.98
PTPN13-205ENST00000502971 GLI3P10071 1580 aa27.44■■□□□ 1.98
PTPN13-205ENST00000502971 LAMB4A4D0S4 1761 aa27.44■■□□□ 1.98
PTPN13-205ENST00000502971 ALDH1L1O75891 902 aa27.44■■□□□ 1.98
PTPN13-205ENST00000502971 ATP8B2P98198 1209 aa27.44■■□□□ 1.98
PTPN13-205ENST00000502971 ERBB4Q15303 1308 aa27.42■■□□□ 1.98
PTPN13-205ENST00000502971 ZBTB47Q9UFB7 747 aaPredicted RBP27.41■■□□□ 1.98
PTPN13-205ENST00000502971 TRPC5Q9UL62 973 aaPredicted RBP27.41■■□□□ 1.98
PTPN13-205ENST00000502971 TNS2Q63HR2 1409 aa27.41■■□□□ 1.98
PTPN13-205ENST00000502971 TOGARAM1Q9Y4F4 1720 aa27.41■■□□□ 1.98
PTPN13-205ENST00000502971 EXOC5O00471 708 aa27.41■■□□□ 1.98
PTPN13-205ENST00000502971 TMOD3Q9NYL9 352 aa27.41■■□□□ 1.98
PTPN13-205ENST00000502971 LRRFIP2Q9Y608 721 aaKnown RBP27.41■■□□□ 1.98
PTPN13-205ENST00000502971 KCPQ6ZWJ8 1503 aa27.41■■□□□ 1.98
PTPN13-205ENST00000502971 IBTKQ9P2D0 1353 aaPredicted RBP27.39■■□□□ 1.97
PTPN13-205ENST00000502971 MYL6BP14649 208 aa27.38■■□□□ 1.97
PTPN13-205ENST00000502971 NPM2Q86SE8 214 aaKnown RBP27.38■■□□□ 1.97
PTPN13-205ENST00000502971 AIMP1Q12904 312 aaKnown RBP27.38■■□□□ 1.97
PTPN13-205ENST00000502971 LRP10Q7Z4F1 713 aa27.38■■□□□ 1.97
PTPN13-205ENST00000502971 LINS1Q8NG48 757 aa27.38■■□□□ 1.97
PTPN13-205ENST00000502971 HDAC5Q9UQL6 1122 aa27.38■■□□□ 1.97
PTPN13-205ENST00000502971 ATRNO75882 1429 aa27.37■■□□□ 1.97
PTPN13-205ENST00000502971 XAGE3Q8WTP9 111 aa27.37■■□□□ 1.97
PTPN13-205ENST00000502971 RIC3Q7Z5B4 369 aa27.36■■□□□ 1.97
PTPN13-205ENST00000502971 GJD4Q96KN9 370 aaPredicted RBP27.36■■□□□ 1.97
PTPN13-205ENST00000502971 COPS6Q7L5N1 327 aa27.36■■□□□ 1.97
PTPN13-205ENST00000502971 ZNF772Q68DY9 489 aaPredicted RBP27.35■■□□□ 1.97
PTPN13-205ENST00000502971 IPO9Q96P70 1041 aaKnown RBP27.35■■□□□ 1.97
PTPN13-205ENST00000502971 NBPF7P0C2Y1 421 aaPredicted RBP27.34■■□□□ 1.97
PTPN13-205ENST00000502971 BMP2KLQ5H9B9 411 aa27.34■■□□□ 1.97
PTPN13-205ENST00000502971 PNMA6EA0A0J9YXQ4 647 aa27.33■■□□□ 1.97
PTPN13-205ENST00000502971 NEXNQ0ZGT2 675 aa27.33■■□□□ 1.96
PTPN13-205ENST00000502971 DDB1Q16531 1140 aa27.33■■□□□ 1.96
PTPN13-205ENST00000502971 SSH3Q8TE77 659 aa27.33■■□□□ 1.96
PTPN13-205ENST00000502971 PIGBQ92521 554 aa27.33■■□□□ 1.96
PTPN13-205ENST00000502971 C9orf78Q9NZ63 289 aaPredicted RBP27.33■■□□□ 1.96
PTPN13-205ENST00000502971 ANKRD13DQ6ZTN6 518 aa27.32■■□□□ 1.96
PTPN13-205ENST00000502971 METTL22Q9BUU2 404 aaPredicted RBP27.32■■□□□ 1.96
PTPN13-205ENST00000502971 QTRT2Q9H974 415 aaKnown RBP27.32■■□□□ 1.96
PTPN13-205ENST00000502971 UTYO14607 1347 aa27.31■■□□□ 1.96
PTPN13-205ENST00000502971 ITGB4P16144 1822 aa27.31■■□□□ 1.96
PTPN13-205ENST00000502971 FAM98CQ17RN3 349 aaKnown RBP27.31■■□□□ 1.96
PTPN13-205ENST00000502971 VSIG10Q8N0Z9 540 aa27.31■■□□□ 1.96
PTPN13-205ENST00000502971 PTCD1O75127 700 aaKnown RBP27.3■■□□□ 1.96
PTPN13-205ENST00000502971 POLA2Q14181 598 aa27.3■■□□□ 1.96
PTPN13-205ENST00000502971 PLEKHM2Q8IWE5 1019 aa27.3■■□□□ 1.96
PTPN13-205ENST00000502971 ONECUT3O60422 494 aaPredicted RBP27.3■■□□□ 1.96
PTPN13-205ENST00000502971 CWF19L2Q2TBE0 894 aaKnown RBP27.3■■□□□ 1.96
PTPN13-205ENST00000502971 TEX13AQ9BXU3 409 aaPredicted RBP27.3■■□□□ 1.96
PTPN13-205ENST00000502971 BCL9O00512 1426 aa27.29■■□□□ 1.96
PTPN13-205ENST00000502971 MSH5O43196 834 aa27.28■■□□□ 1.96
PTPN13-205ENST00000502971 PPP1R42Q7Z4L9 355 aa27.28■■□□□ 1.96
PTPN13-205ENST00000502971 NBPF26B4DH59 902 aa27.27■■□□□ 1.96
PTPN13-205ENST00000502971 GRM8O00222 908 aa27.27■■□□□ 1.96
PTPN13-205ENST00000502971 SEC24BO95487 1268 aa27.27■■□□□ 1.96
PTPN13-205ENST00000502971 IGKV5-2P06315 115 aa27.27■■□□□ 1.96
PTPN13-205ENST00000502971 MTX1Q13505 466 aa27.27■■□□□ 1.96
PTPN13-205ENST00000502971 NBPF14Q5TI25 921 aa27.27■■□□□ 1.96
PTPN13-205ENST00000502971 NBPF10Q6P3W6 841 aaKnown RBP27.27■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms