RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 TEX13AQ9BXU3 409 aaPredicted RBP8.28□□□□□ -1.08
LSM3P4-201ENST00000502948 SCN7AQ01118 1682 aa8.27□□□□□ -1.08
LSM3P4-201ENST00000502948 DICER1Q9UPY3 1922 aaKnown RBP8.27□□□□□ -1.09
LSM3P4-201ENST00000502948 COL15A1P39059 1388 aa8.27□□□□□ -1.09
LSM3P4-201ENST00000502948 WDR90Q96KV7 1748 aa8.27□□□□□ -1.09
LSM3P4-201ENST00000502948 ZPR1O75312 459 aa8.27□□□□□ -1.09
LSM3P4-201ENST00000502948 FSTL1Q12841 308 aa8.27□□□□□ -1.09
LSM3P4-201ENST00000502948 MTHFSDQ2M296 383 aaKnown RBP8.27□□□□□ -1.09
LSM3P4-201ENST00000502948 RBM46Q8TBY0 533 aaKnown RBP8.27□□□□□ -1.09
LSM3P4-201ENST00000502948 KDM2BQ8NHM5 1336 aa8.27□□□□□ -1.09
LSM3P4-201ENST00000502948 CEMIPQ8WUJ3 1361 aa8.26□□□□□ -1.09
LSM3P4-201ENST00000502948 ARFGEF2Q9Y6D5 1785 aa8.26□□□□□ -1.09
LSM3P4-201ENST00000502948 A0A087WZG4 1122 aa8.26□□□□□ -1.09
LSM3P4-201ENST00000502948 RGL2O15211 777 aa8.26□□□□□ -1.09
LSM3P4-201ENST00000502948 ARHGAP27Q6ZUM4 889 aa8.26□□□□□ -1.09
LSM3P4-201ENST00000502948 DNAJC10Q8IXB1 793 aa8.26□□□□□ -1.09
LSM3P4-201ENST00000502948 CCER1Q8TC90 406 aaPredicted RBP8.26□□□□□ -1.09
LSM3P4-201ENST00000502948 LGR6Q9HBX8 967 aa8.26□□□□□ -1.09
LSM3P4-201ENST00000502948 CCDC88AQ3V6T2 1871 aa8.26□□□□□ -1.09
LSM3P4-201ENST00000502948 STARD3NLO95772 234 aa8.25□□□□□ -1.09
LSM3P4-201ENST00000502948 EIF5P55010 431 aaKnown RBP8.25□□□□□ -1.09
LSM3P4-201ENST00000502948 DNAJC5GQ8N7S2 189 aa8.25□□□□□ -1.09
LSM3P4-201ENST00000502948 GAS2L2Q8NHY3 880 aa8.25□□□□□ -1.09
LSM3P4-201ENST00000502948 SRP68Q9UHB9 627 aaKnown RBP8.25□□□□□ -1.09
LSM3P4-201ENST00000502948 FER1L6Q2WGJ9 1857 aa8.25□□□□□ -1.09
LSM3P4-201ENST00000502948 ANKRD31Q8N7Z5 1873 aa8.25□□□□□ -1.09
LSM3P4-201ENST00000502948 BCORQ6W2J9 1755 aa8.25□□□□□ -1.09
LSM3P4-201ENST00000502948 HEG1Q9ULI3 1381 aa8.24□□□□□ -1.09
LSM3P4-201ENST00000502948 GNAT3A8MTJ3 354 aa8.24□□□□□ -1.09
LSM3P4-201ENST00000502948 IL6STP40189 918 aaPredicted RBP8.24□□□□□ -1.09
LSM3P4-201ENST00000502948 NFIXQ14938 502 aa8.24□□□□□ -1.09
LSM3P4-201ENST00000502948 C9orf131Q5VYM1 1079 aa8.24□□□□□ -1.09
LSM3P4-201ENST00000502948 USPL1Q5W0Q7 1092 aa8.24□□□□□ -1.09
LSM3P4-201ENST00000502948 ZNF790Q6PG37 636 aa8.24□□□□□ -1.09
LSM3P4-201ENST00000502948 ZNF526Q8TF50 670 aaPredicted RBP8.24□□□□□ -1.09
LSM3P4-201ENST00000502948 BCL2L12Q9HB09 334 aa8.24□□□□□ -1.09
LSM3P4-201ENST00000502948 ZBTB1Q9Y2K1 713 aa8.24□□□□□ -1.09
LSM3P4-201ENST00000502948 TIAM2Q8IVF5 1701 aa8.23□□□□□ -1.09
LSM3P4-201ENST00000502948 SERPINB2P05120 415 aa8.23□□□□□ -1.09
LSM3P4-201ENST00000502948 HMOX1P09601 288 aa8.23□□□□□ -1.09
LSM3P4-201ENST00000502948 LMNB1P20700 586 aa8.23□□□□□ -1.09
LSM3P4-201ENST00000502948 TTC5Q8N0Z6 440 aa8.23□□□□□ -1.09
LSM3P4-201ENST00000502948 HTATSF1O43719 755 aaKnown RBP8.22□□□□□ -1.09
LSM3P4-201ENST00000502948 CHRNA5P30532 468 aa8.22□□□□□ -1.09
LSM3P4-201ENST00000502948 SLC39A6Q13433 755 aa8.22□□□□□ -1.09
LSM3P4-201ENST00000502948 TTLL6Q8N841 843 aa8.22□□□□□ -1.09
LSM3P4-201ENST00000502948 JMYQ8N9B5 988 aa8.22□□□□□ -1.09
LSM3P4-201ENST00000502948 IL17REQ8NFR9 667 aa8.22□□□□□ -1.09
LSM3P4-201ENST00000502948 FMNL2Q96PY5 1086 aa8.22□□□□□ -1.09
LSM3P4-201ENST00000502948 BRIP1Q9BX63 1249 aa8.22□□□□□ -1.09
LSM3P4-201ENST00000502948 NMRK2Q9NPI5 230 aa8.22□□□□□ -1.09
LSM3P4-201ENST00000502948 WWC3Q9ULE0 1092 aa8.22□□□□□ -1.09
LSM3P4-201ENST00000502948 LTBP3Q9NS15 1303 aa8.22□□□□□ -1.09
LSM3P4-201ENST00000502948 CARMIL3Q8ND23 1372 aa8.22□□□□□ -1.09
LSM3P4-201ENST00000502948 GLTPD2A6NH11 291 aa8.21□□□□□ -1.1
LSM3P4-201ENST00000502948 H0YIN7 160 aa8.21□□□□□ -1.1
LSM3P4-201ENST00000502948 PDE6BP35913 854 aa8.21□□□□□ -1.1
LSM3P4-201ENST00000502948 TEFQ10587 303 aa8.21□□□□□ -1.1
LSM3P4-201ENST00000502948 CLEC4GQ6UXB4 293 aa8.21□□□□□ -1.1
LSM3P4-201ENST00000502948 SMC1BQ8NDV3 1235 aa8.21□□□□□ -1.1
LSM3P4-201ENST00000502948 ZNF496Q96IT1 587 aaPredicted RBP8.21□□□□□ -1.1
LSM3P4-201ENST00000502948 RNF181Q9P0P0 153 aa8.21□□□□□ -1.1
LSM3P4-201ENST00000502948 COL11A2P13942 1736 aaPredicted RBP8.2□□□□□ -1.1
LSM3P4-201ENST00000502948 SCN4AP35499 1836 aa8.2□□□□□ -1.1
LSM3P4-201ENST00000502948 VEGFAP15692 232 aaPredicted RBP8.2□□□□□ -1.1
LSM3P4-201ENST00000502948 CC2D1BQ5T0F9 858 aaKnown RBP8.2□□□□□ -1.1
LSM3P4-201ENST00000502948 SOGA3Q5TF21 947 aa8.2□□□□□ -1.1
LSM3P4-201ENST00000502948 C16orf71Q8IYS4 520 aaPredicted RBP8.2□□□□□ -1.1
LSM3P4-201ENST00000502948 KLRG1Q96E93 195 aa8.2□□□□□ -1.1
LSM3P4-201ENST00000502948 CFAP53Q96M91 514 aa8.2□□□□□ -1.1
LSM3P4-201ENST00000502948 RSPH6AQ9H0K4 717 aa8.2□□□□□ -1.1
LSM3P4-201ENST00000502948 LAMB4A4D0S4 1761 aa8.2□□□□□ -1.1
LSM3P4-201ENST00000502948 KLRG2A4D1S0 409 aaPredicted RBP8.19□□□□□ -1.1
LSM3P4-201ENST00000502948 CANXP27824 592 aaKnown RBP8.19□□□□□ -1.1
LSM3P4-201ENST00000502948 C2CD5Q86YS7 1000 aa8.19□□□□□ -1.1
LSM3P4-201ENST00000502948 NUDCQ9Y266 331 aa8.19□□□□□ -1.1
LSM3P4-201ENST00000502948 SLX4Q8IY92 1834 aa8.18□□□□□ -1.1
LSM3P4-201ENST00000502948 BTBD11A6QL63 1104 aa8.18□□□□□ -1.1
LSM3P4-201ENST00000502948 NFKBIEO00221 500 aa8.18□□□□□ -1.1
LSM3P4-201ENST00000502948 CAMTA2O94983 1202 aa8.18□□□□□ -1.1
LSM3P4-201ENST00000502948 TBC1D9BQ66K14 1250 aa8.18□□□□□ -1.1
LSM3P4-201ENST00000502948 STYK1Q6J9G0 422 aa8.18□□□□□ -1.1
LSM3P4-201ENST00000502948 PRR5LQ6MZQ0 368 aa8.18□□□□□ -1.1
LSM3P4-201ENST00000502948 DPY19L2Q6NUT2 758 aa8.18□□□□□ -1.1
LSM3P4-201ENST00000502948 CNKSR1Q969H4 720 aa8.18□□□□□ -1.1
LSM3P4-201ENST00000502948 RRAGCQ9HB90 399 aa8.18□□□□□ -1.1
LSM3P4-201ENST00000502948 DLG5Q8TDM6 1919 aa8.18□□□□□ -1.1
LSM3P4-201ENST00000502948 KDM3BQ7LBC6 1761 aa8.17□□□□□ -1.1
LSM3P4-201ENST00000502948 CACNA1SQ13698 1873 aa8.17□□□□□ -1.1
LSM3P4-201ENST00000502948 U2SURPO15042 1029 aaKnown RBP8.17□□□□□ -1.1
LSM3P4-201ENST00000502948 SNRPA1P09661 255 aaKnown RBP8.17□□□□□ -1.1
LSM3P4-201ENST00000502948 SRGNP10124 158 aa8.17□□□□□ -1.1
LSM3P4-201ENST00000502948 PRELPP51888 382 aa8.17□□□□□ -1.1
LSM3P4-201ENST00000502948 NPM2Q86SE8 214 aaKnown RBP8.17□□□□□ -1.1
LSM3P4-201ENST00000502948 MASTLQ96GX5 879 aa8.17□□□□□ -1.1
LSM3P4-201ENST00000502948 PHACTR3Q96KR7 559 aa8.17□□□□□ -1.1
LSM3P4-201ENST00000502948 SETDB2Q96T68 719 aa8.17□□□□□ -1.1
LSM3P4-201ENST00000502948 ZNF652Q9Y2D9 606 aa8.17□□□□□ -1.1
LSM3P4-201ENST00000502948 PRKAR2BP31323 418 aa8.16□□□□□ -1.1
LSM3P4-201ENST00000502948 NUP98P52948 1817 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms