RNA–Protein interactions for RNA: ENST00000502818.5

CPNE4-202, Transcript of copine 4, humanhuman

TSL 5 BASIC

Gene CPNE4, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-202ENST00000502818 MRC1P22897 1456 aa9.26□□□□□ -0.93
CPNE4-202ENST00000502818 PLCH1Q4KWH8 1693 aa9.26□□□□□ -0.93
CPNE4-202ENST00000502818 SPATA31A1Q5TZJ5 1347 aa9.26□□□□□ -0.93
CPNE4-202ENST00000502818 PARP4Q9UKK3 1724 aaKnown RBP9.26□□□□□ -0.93
CPNE4-202ENST00000502818 MS4A1P11836 297 aa9.26□□□□□ -0.93
CPNE4-202ENST00000502818 FKBP5Q13451 457 aaPredicted RBP9.26□□□□□ -0.93
CPNE4-202ENST00000502818 INTS3Q68E01 1043 aaKnown RBP9.26□□□□□ -0.93
CPNE4-202ENST00000502818 SLIT2O94813 1529 aa9.25□□□□□ -0.93
CPNE4-202ENST00000502818 PTPRCP08575 1304 aa9.25□□□□□ -0.93
CPNE4-202ENST00000502818 NRAPQ86VF7 1730 aa9.25□□□□□ -0.93
CPNE4-202ENST00000502818 TOGARAM1Q9Y4F4 1720 aa9.25□□□□□ -0.93
CPNE4-202ENST00000502818 RGS3P49796 1198 aa9.25□□□□□ -0.93
CPNE4-202ENST00000502818 SPATA31A5Q5VU36 1347 aa9.24□□□□□ -0.93
CPNE4-202ENST00000502818 SPATA31A7Q8IWB4 1347 aa9.24□□□□□ -0.93
CPNE4-202ENST00000502818 GLI3P10071 1580 aa9.24□□□□□ -0.93
CPNE4-202ENST00000502818 JCADQ9P266 1359 aa9.24□□□□□ -0.93
CPNE4-202ENST00000502818 PTCD1O75127 700 aaKnown RBP9.24□□□□□ -0.93
CPNE4-202ENST00000502818 HSP90AB1P08238 724 aaKnown RBP9.24□□□□□ -0.93
CPNE4-202ENST00000502818 PIGBQ92521 554 aa9.24□□□□□ -0.93
CPNE4-202ENST00000502818 NGLY1Q96IV0 654 aa9.24□□□□□ -0.93
CPNE4-202ENST00000502818 ASAP1Q9ULH1 1129 aa9.24□□□□□ -0.93
CPNE4-202ENST00000502818 CCDC9Q9Y3X0 531 aaKnown RBP9.24□□□□□ -0.93
CPNE4-202ENST00000502818 C5P01031 1676 aa9.24□□□□□ -0.93
CPNE4-202ENST00000502818 BCL9LQ86UU0 1499 aa9.24□□□□□ -0.93
CPNE4-202ENST00000502818 ADCY9O60503 1353 aa9.24□□□□□ -0.93
CPNE4-202ENST00000502818 MYL6BP14649 208 aa9.23□□□□□ -0.93
CPNE4-202ENST00000502818 SPNS2Q8IVW8 549 aa9.23□□□□□ -0.93
CPNE4-202ENST00000502818 PDZRN3Q9UPQ7 1066 aa9.23□□□□□ -0.93
CPNE4-202ENST00000502818 PI4KAP2A4QPH2 592 aa9.23□□□□□ -0.93
CPNE4-202ENST00000502818 ERVV-2B6SEH9 535 aa9.23□□□□□ -0.93
CPNE4-202ENST00000502818 HOXB7P09629 217 aa9.23□□□□□ -0.93
CPNE4-202ENST00000502818 AIMP1Q12904 312 aaKnown RBP9.23□□□□□ -0.93
CPNE4-202ENST00000502818 LCE2DQ5TA82 110 aaPredicted RBP9.23□□□□□ -0.93
CPNE4-202ENST00000502818 LRP10Q7Z4F1 713 aa9.23□□□□□ -0.93
CPNE4-202ENST00000502818 PI4KAP1Q8N8J0 262 aa9.23□□□□□ -0.93
CPNE4-202ENST00000502818 MARCH10Q8NA82 808 aaPredicted RBP9.23□□□□□ -0.93
CPNE4-202ENST00000502818 PLEKHG2Q9H7P9 1386 aa9.22□□□□□ -0.93
CPNE4-202ENST00000502818 EXOC5O00471 708 aa9.22□□□□□ -0.93
CPNE4-202ENST00000502818 FAM98CQ17RN3 349 aaKnown RBP9.22□□□□□ -0.93
CPNE4-202ENST00000502818 UNC5CLQ8IV45 518 aa9.22□□□□□ -0.93
CPNE4-202ENST00000502818 TTC5Q8N0Z6 440 aa9.22□□□□□ -0.93
CPNE4-202ENST00000502818 ACSBG1Q96GR2 724 aa9.22□□□□□ -0.93
CPNE4-202ENST00000502818 SOS1Q07889 1333 aaPredicted RBP9.22□□□□□ -0.93
CPNE4-202ENST00000502818 NBPF26B4DH59 902 aa9.22□□□□□ -0.93
CPNE4-202ENST00000502818 PDE4AP27815 886 aa9.22□□□□□ -0.93
CPNE4-202ENST00000502818 CLCN6P51797 869 aa9.22□□□□□ -0.93
CPNE4-202ENST00000502818 HDAC1Q13547 482 aaPredicted RBP9.22□□□□□ -0.93
CPNE4-202ENST00000502818 NBPF14Q5TI25 921 aa9.22□□□□□ -0.93
CPNE4-202ENST00000502818 NBPF10Q6P3W6 841 aaKnown RBP9.22□□□□□ -0.93
CPNE4-202ENST00000502818 NBPF15Q8N660 670 aa9.22□□□□□ -0.93
CPNE4-202ENST00000502818 SLC4A9Q96Q91 983 aa9.22□□□□□ -0.93
CPNE4-202ENST00000502818 RWDD1Q9H446 243 aaPredicted RBP9.22□□□□□ -0.93
CPNE4-202ENST00000502818 ATG3Q9NT62 314 aa9.22□□□□□ -0.93
CPNE4-202ENST00000502818 DBF4Q9UBU7 674 aaPredicted RBP9.22□□□□□ -0.93
CPNE4-202ENST00000502818 KCPQ6ZWJ8 1503 aa9.22□□□□□ -0.93
CPNE4-202ENST00000502818 A1BGP04217 495 aa9.21□□□□□ -0.94
CPNE4-202ENST00000502818 SNRPA1P09661 255 aaKnown RBP9.21□□□□□ -0.94
CPNE4-202ENST00000502818 PRIM1P49642 420 aaKnown RBP9.21□□□□□ -0.94
CPNE4-202ENST00000502818 PTF1AQ7RTS3 328 aa9.21□□□□□ -0.94
CPNE4-202ENST00000502818 FAM163AQ96GL9 167 aaPredicted RBP9.21□□□□□ -0.94
CPNE4-202ENST00000502818 FMNL2Q96PY5 1086 aa9.21□□□□□ -0.94
CPNE4-202ENST00000502818 ATP10DQ9P241 1426 aa9.21□□□□□ -0.94
CPNE4-202ENST00000502818 AAMPQ13685 434 aa9.2□□□□□ -0.94
CPNE4-202ENST00000502818 FAM182BQ5T319 152 aa9.2□□□□□ -0.94
CPNE4-202ENST00000502818 BEND3Q5T5X7 828 aa9.2□□□□□ -0.94
CPNE4-202ENST00000502818 CEP85Q6P2H3 762 aa9.2□□□□□ -0.94
CPNE4-202ENST00000502818 XAGE3Q8WTP9 111 aa9.2□□□□□ -0.94
CPNE4-202ENST00000502818 SYTL4Q96C24 671 aaPredicted RBP9.2□□□□□ -0.94
CPNE4-202ENST00000502818 USP44Q9H0E7 712 aa9.2□□□□□ -0.94
CPNE4-202ENST00000502818 DDX21Q9NR30 783 aaKnown RBP eCLIP9.2□□□□□ -0.94
CPNE4-202ENST00000502818 TMOD3Q9NYL9 352 aa9.2□□□□□ -0.94
CPNE4-202ENST00000502818 MAP3K2Q9Y2U5 619 aa9.2□□□□□ -0.94
CPNE4-202ENST00000502818 DDB1Q16531 1140 aa9.2□□□□□ -0.94
CPNE4-202ENST00000502818 CWF19L2Q2TBE0 894 aaKnown RBP9.2□□□□□ -0.94
CPNE4-202ENST00000502818 FNBP4Q8N3X1 1017 aaPredicted RBP9.2□□□□□ -0.94
CPNE4-202ENST00000502818 DNAAF4Q8WXU2 420 aa9.2□□□□□ -0.94
CPNE4-202ENST00000502818 TNS2Q63HR2 1409 aa9.2□□□□□ -0.94
CPNE4-202ENST00000502818 A0A0G2JS52 829 aa9.19□□□□□ -0.94
CPNE4-202ENST00000502818 KCNQ2O43526 872 aa9.19□□□□□ -0.94
CPNE4-202ENST00000502818 ABCB7O75027 752 aa9.19□□□□□ -0.94
CPNE4-202ENST00000502818 NBPF7P0C2Y1 421 aaPredicted RBP9.19□□□□□ -0.94
CPNE4-202ENST00000502818 CCT4P50991 539 aaKnown RBP9.19□□□□□ -0.94
CPNE4-202ENST00000502818 COPS6Q7L5N1 327 aa9.19□□□□□ -0.94
CPNE4-202ENST00000502818 SMC5Q8IY18 1101 aa9.19□□□□□ -0.94
CPNE4-202ENST00000502818 USP21Q9UK80 565 aa9.19□□□□□ -0.94
CPNE4-202ENST00000502818 VPS72Q15906 364 aa9.19□□□□□ -0.94
CPNE4-202ENST00000502818 DNAJC10Q8IXB1 793 aa9.19□□□□□ -0.94
CPNE4-202ENST00000502818 JARID2Q92833 1246 aaPredicted RBP9.19□□□□□ -0.94
CPNE4-202ENST00000502818 WNK3Q9BYP7 1800 aa9.18□□□□□ -0.94
CPNE4-202ENST00000502818 KAT6BQ8WYB5 2073 aa9.18□□□□□ -0.94
CPNE4-202ENST00000502818 PNMA6EA0A0J9YXQ4 647 aa9.18□□□□□ -0.94
CPNE4-202ENST00000502818 BCL9O00512 1426 aa9.18□□□□□ -0.94
CPNE4-202ENST00000502818 KSR2Q6VAB6 950 aa9.18□□□□□ -0.94
CPNE4-202ENST00000502818 BARGINQ6ZT62 677 aa9.18□□□□□ -0.94
CPNE4-202ENST00000502818 TTLL7Q6ZT98 887 aa9.18□□□□□ -0.94
CPNE4-202ENST00000502818 ANKRD44Q8N8A2 993 aa9.18□□□□□ -0.94
CPNE4-202ENST00000502818 HYPKQ9NX55 129 aa9.18□□□□□ -0.94
CPNE4-202ENST00000502818 THRAP3Q9Y2W1 955 aaKnown RBP9.18□□□□□ -0.94
CPNE4-202ENST00000502818 LRRFIP2Q9Y608 721 aaKnown RBP9.18□□□□□ -0.94
CPNE4-202ENST00000502818 PAPPAQ13219 1627 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms