RNA–Protein interactions for RNA: ENST00000502801.1

CCDC149-203, Transcript of coiled-coil domain containing 149, humanhuman

TSL 1 (best) BASIC

Gene CCDC149, Length 1,079 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149-203ENST00000502801 GPR162Q16538 588 aa34.54■■■■□ 3.12
CCDC149-203ENST00000502801 CANXP27824 592 aaKnown RBP34.52■■■■□ 3.12
CCDC149-203ENST00000502801 TAF7Q15545 349 aaPredicted RBP34.52■■■■□ 3.12
CCDC149-203ENST00000502801 PELP1Q8IZL8 1130 aaKnown RBP34.51■■■■□ 3.12
CCDC149-203ENST00000502801 COL15A1P39059 1388 aa34.5■■■■□ 3.11
CCDC149-203ENST00000502801 ZNF316A6NFI3 1004 aaPredicted RBP34.5■■■■□ 3.11
CCDC149-203ENST00000502801 FKBP8Q14318 412 aa34.5■■■■□ 3.11
CCDC149-203ENST00000502801 UTRNP46939 3433 aa34.49■■■■□ 3.11
CCDC149-203ENST00000502801 ZPR1O75312 459 aa34.49■■■■□ 3.11
CCDC149-203ENST00000502801 THUMPD2Q9BTF0 503 aaKnown RBP34.48■■■■□ 3.11
CCDC149-203ENST00000502801 MIS18AQ9NYP9 233 aa34.48■■■■□ 3.11
CCDC149-203ENST00000502801 YY1P25490 414 aa34.47■■■■□ 3.11
CCDC149-203ENST00000502801 WDR43Q15061 677 aaKnown RBP eCLIP34.47■■■■□ 3.11
CCDC149-203ENST00000502801 USPL1Q5W0Q7 1092 aa34.47■■■■□ 3.11
CCDC149-203ENST00000502801 NARFQ9UHQ1 456 aa34.47■■■■□ 3.11
CCDC149-203ENST00000502801 PARP3Q9Y6F1 533 aa34.47■■■■□ 3.11
CCDC149-203ENST00000502801 EIF5P55010 431 aaKnown RBP34.46■■■■□ 3.11
CCDC149-203ENST00000502801 USP16Q9Y5T5 823 aa34.45■■■■□ 3.11
CCDC149-203ENST00000502801 CHD4Q14839 1912 aa34.45■■■■□ 3.11
CCDC149-203ENST00000502801 GOLGB1Q14789 3259 aaKnown RBP34.44■■■■□ 3.1
CCDC149-203ENST00000502801 KIF13BQ9NQT8 1826 aa34.44■■■■□ 3.1
CCDC149-203ENST00000502801 PRAMEF22A3QJZ6 481 aa34.44■■■■□ 3.1
CCDC149-203ENST00000502801 A1BGP04217 495 aa34.44■■■■□ 3.1
CCDC149-203ENST00000502801 RIPK4P57078 832 aa34.44■■■■□ 3.1
CCDC149-203ENST00000502801 CCDC146Q8IYE0 955 aa34.44■■■■□ 3.1
CCDC149-203ENST00000502801 SNRPA1P09661 255 aaKnown RBP34.43■■■■□ 3.1
CCDC149-203ENST00000502801 TMPOP42166 694 aaKnown RBP34.43■■■■□ 3.1
CCDC149-203ENST00000502801 ADAMTS8Q9UP79 889 aa34.43■■■■□ 3.1
CCDC149-203ENST00000502801 YBX3P16989 372 aaKnown RBP eCLIP34.42■■■■□ 3.1
CCDC149-203ENST00000502801 PNISRQ8TF01 805 aaKnown RBP34.42■■■■□ 3.1
CCDC149-203ENST00000502801 KDM3BQ7LBC6 1761 aa34.41■■■■□ 3.1
CCDC149-203ENST00000502801 DDR1Q08345 913 aa34.41■■■■□ 3.1
CCDC149-203ENST00000502801 TM4SF1P30408 202 aa34.4■■■■□ 3.1
CCDC149-203ENST00000502801 IL6STP40189 918 aaPredicted RBP34.4■■■■□ 3.1
CCDC149-203ENST00000502801 ZNF330Q9Y3S2 320 aaPredicted RBP34.4■■■■□ 3.1
CCDC149-203ENST00000502801 A0A087WZG4 1122 aa34.39■■■■□ 3.1
CCDC149-203ENST00000502801 RUNDC1Q96C34 613 aa34.39■■■■□ 3.1
CCDC149-203ENST00000502801 BCL2L12Q9HB09 334 aa34.39■■■■□ 3.1
CCDC149-203ENST00000502801 C10orf71Q711Q0 1435 aa34.38■■■■□ 3.09
CCDC149-203ENST00000502801 RRP7AQ9Y3A4 280 aaKnown RBP34.38■■■■□ 3.09
CCDC149-203ENST00000502801 N4BP2Q86UW6 1770 aaPredicted RBP34.36■■■■□ 3.09
CCDC149-203ENST00000502801 KIAA1551Q9HCM1 1747 aa34.35■■■■□ 3.09
CCDC149-203ENST00000502801 POLRMTO00411 1230 aaKnown RBP34.35■■■■□ 3.09
CCDC149-203ENST00000502801 PIP4K2AP48426 406 aaPredicted RBP34.35■■■■□ 3.09
CCDC149-203ENST00000502801 LMOD3Q0VAK6 560 aa34.35■■■■□ 3.09
CCDC149-203ENST00000502801 NFIXQ14938 502 aa34.35■■■■□ 3.09
CCDC149-203ENST00000502801 NEUROD2Q15784 382 aa34.35■■■■□ 3.09
CCDC149-203ENST00000502801 WWC3Q9ULE0 1092 aa34.35■■■■□ 3.09
CCDC149-203ENST00000502801 TBC1D2BQ9UPU7 963 aa34.35■■■■□ 3.09
CCDC149-203ENST00000502801 GRIN3BO60391 1043 aa34.34■■■■□ 3.09
CCDC149-203ENST00000502801 TGFB2P61812 414 aa34.34■■■■□ 3.09
CCDC149-203ENST00000502801 PXDNLA1KZ92 1463 aa34.33■■■■□ 3.09
CCDC149-203ENST00000502801 NPM2Q86SE8 214 aaKnown RBP34.33■■■■□ 3.09
CCDC149-203ENST00000502801 EIF4A1P60842 406 aaKnown RBP34.32■■■■□ 3.08
CCDC149-203ENST00000502801 AFDNP55196 1824 aaKnown RBP34.32■■■■□ 3.08
CCDC149-203ENST00000502801 LAMB4A4D0S4 1761 aa34.31■■■■□ 3.08
CCDC149-203ENST00000502801 A0A0G2JLW4 131 aa34.3■■■■□ 3.08
CCDC149-203ENST00000502801 SCN7AQ01118 1682 aa34.3■■■■□ 3.08
CCDC149-203ENST00000502801 GIGYF1O75420 1035 aaPredicted RBP34.29■■■■□ 3.08
CCDC149-203ENST00000502801 TSPYL4Q9UJ04 414 aa34.29■■■■□ 3.08
CCDC149-203ENST00000502801 NBPF26B4DH59 902 aa34.28■■■■□ 3.08
CCDC149-203ENST00000502801 NBPF10Q6P3W6 841 aaKnown RBP34.28■■■■□ 3.08
CCDC149-203ENST00000502801 NBPF15Q8N660 670 aa34.28■■■■□ 3.08
CCDC149-203ENST00000502801 DPEP1P16444 411 aa34.27■■■■□ 3.08
CCDC149-203ENST00000502801 BICDL1Q6ZP65 573 aa34.27■■■■□ 3.08
CCDC149-203ENST00000502801 DZIP3Q86Y13 1208 aaKnown RBP34.27■■■■□ 3.08
CCDC149-203ENST00000502801 TRIM35Q9UPQ4 493 aa34.27■■■■□ 3.08
CCDC149-203ENST00000502801 CCDC184Q52MB2 194 aa34.26■■■■□ 3.08
CCDC149-203ENST00000502801 NRXN2Q9P2S2 1712 aa34.26■■■■□ 3.07
CCDC149-203ENST00000502801 CAMTA2O94983 1202 aa34.25■■■■□ 3.07
CCDC149-203ENST00000502801 SERPINB2P05120 415 aa34.25■■■■□ 3.07
CCDC149-203ENST00000502801 TBC1D9BQ66K14 1250 aa34.25■■■■□ 3.07
CCDC149-203ENST00000502801 BABAM1Q9NWV8 329 aa34.24■■■■□ 3.07
CCDC149-203ENST00000502801 BCORQ6W2J9 1755 aa34.23■■■■□ 3.07
CCDC149-203ENST00000502801 BRCA1P38398 1863 aaKnown RBP34.22■■■■□ 3.07
CCDC149-203ENST00000502801 ANP32CO43423 234 aa34.21■■■■□ 3.07
CCDC149-203ENST00000502801 KCNA3P22001 575 aa34.21■■■■□ 3.07
CCDC149-203ENST00000502801 BCS1LQ9Y276 419 aa34.19■■■■□ 3.06
CCDC149-203ENST00000502801 APAF1O14727 1248 aa34.18■■■■□ 3.06
CCDC149-203ENST00000502801 CHRNA5P30532 468 aa34.17■■■■□ 3.06
CCDC149-203ENST00000502801 CHL1O00533 1208 aa34.16■■■■□ 3.06
CCDC149-203ENST00000502801 SETDB2Q96T68 719 aa34.16■■■■□ 3.06
CCDC149-203ENST00000502801 LAS1LQ9Y4W2 734 aaKnown RBP34.16■■■■□ 3.06
CCDC149-203ENST00000502801 CLEC4GQ6UXB4 293 aa34.15■■■■□ 3.06
CCDC149-203ENST00000502801 ZNF784Q8NCA9 323 aaPredicted RBP34.15■■■■□ 3.06
CCDC149-203ENST00000502801 PIM2Q9P1W9 311 aa34.15■■■■□ 3.06
CCDC149-203ENST00000502801 CARMIL3Q8ND23 1372 aa34.14■■■■□ 3.06
CCDC149-203ENST00000502801 NGEFQ8N5V2 710 aa34.14■■■■□ 3.06
CCDC149-203ENST00000502801 ZNF652Q9Y2D9 606 aa34.13■■■■□ 3.05
CCDC149-203ENST00000502801 MYL6BP14649 208 aa34.12■■■■□ 3.05
CCDC149-203ENST00000502801 MRS2Q9HD23 443 aa34.11■■■■□ 3.05
CCDC149-203ENST00000502801 ARFGEF1Q9Y6D6 1849 aa34.11■■■■□ 3.05
CCDC149-203ENST00000502801 EIF2S2P20042 333 aaKnown RBP34.1■■■■□ 3.05
CCDC149-203ENST00000502801 PRR5LQ6MZQ0 368 aa34.1■■■■□ 3.05
CCDC149-203ENST00000502801 ANKRD31Q8N7Z5 1873 aa34.1■■■■□ 3.05
CCDC149-203ENST00000502801 ERBB4Q15303 1308 aa34.09■■■■□ 3.05
CCDC149-203ENST00000502801 RGL2O15211 777 aa34.09■■■■□ 3.05
CCDC149-203ENST00000502801 DALRD3Q5D0E6 543 aaKnown RBP34.09■■■■□ 3.05
CCDC149-203ENST00000502801 HLFQ16534 295 aa34.08■■■■□ 3.05
CCDC149-203ENST00000502801 CCDC24Q8N4L8 307 aa34.08■■■■□ 3.05
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms