RNA–Protein interactions for RNA: ENST00000502734.1

COPB2-202, Transcript of coatomer protein complex subunit beta 2, humanhuman

TSL 2

Gene COPB2, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-202ENST00000502734 PRKAR2BP31323 418 aa12.07□□□□□ -0.48
COPB2-202ENST00000502734 U2AF1Q01081 240 aaKnown RBP eCLIP12.07□□□□□ -0.48
COPB2-202ENST00000502734 ZNF790Q6PG37 636 aa12.07□□□□□ -0.48
COPB2-202ENST00000502734 ARHGAP27Q6ZUM4 889 aa12.07□□□□□ -0.48
COPB2-202ENST00000502734 RSPH6AQ9H0K4 717 aa12.07□□□□□ -0.48
COPB2-202ENST00000502734 GPBP1L1Q9HC44 474 aaPredicted RBP12.07□□□□□ -0.48
COPB2-202ENST00000502734 ZBTB1Q9Y2K1 713 aa12.07□□□□□ -0.48
COPB2-202ENST00000502734 SCN11AQ9UI33 1791 aa12.06□□□□□ -0.48
COPB2-202ENST00000502734 POLRMTO00411 1230 aaKnown RBP12.06□□□□□ -0.48
COPB2-202ENST00000502734 CANXP27824 592 aaKnown RBP12.06□□□□□ -0.48
COPB2-202ENST00000502734 DDR1Q08345 913 aa12.06□□□□□ -0.48
COPB2-202ENST00000502734 ZNF496Q96IT1 587 aaPredicted RBP12.06□□□□□ -0.48
COPB2-202ENST00000502734 PIM2Q9P1W9 311 aa12.06□□□□□ -0.48
COPB2-202ENST00000502734 ATP10DQ9P241 1426 aa12.05□□□□□ -0.48
COPB2-202ENST00000502734 A0A087WZG4 1122 aa12.05□□□□□ -0.48
COPB2-202ENST00000502734 SENP3-EIF4A1A0A087X0R7 540 aa12.05□□□□□ -0.48
COPB2-202ENST00000502734 PXDNLA1KZ92 1463 aa12.05□□□□□ -0.48
COPB2-202ENST00000502734 COL3A1P02461 1466 aaPredicted RBP12.05□□□□□ -0.48
COPB2-202ENST00000502734 CICQ96RK0 1608 aaPredicted RBP12.04□□□□□ -0.48
COPB2-202ENST00000502734 C10orf71Q711Q0 1435 aa12.04□□□□□ -0.48
COPB2-202ENST00000502734 COL5A3P25940 1745 aaPredicted RBP12.04□□□□□ -0.48
COPB2-202ENST00000502734 BTBD11A6QL63 1104 aa12.04□□□□□ -0.48
COPB2-202ENST00000502734 EIF5P55010 431 aaKnown RBP12.04□□□□□ -0.48
COPB2-202ENST00000502734 NFIXQ14938 502 aa12.04□□□□□ -0.48
COPB2-202ENST00000502734 DALRD3Q5D0E6 543 aaKnown RBP12.04□□□□□ -0.48
COPB2-202ENST00000502734 ZNF526Q8TF50 670 aaPredicted RBP12.04□□□□□ -0.48
COPB2-202ENST00000502734 RTF1Q92541 710 aaKnown RBP12.04□□□□□ -0.48
COPB2-202ENST00000502734 FMNL2Q96PY5 1086 aa12.04□□□□□ -0.48
COPB2-202ENST00000502734 MRC1P22897 1456 aa12.03□□□□□ -0.48
COPB2-202ENST00000502734 SERPINB2P05120 415 aa12.03□□□□□ -0.48
COPB2-202ENST00000502734 BCL2L12Q9HB09 334 aa12.03□□□□□ -0.48
COPB2-202ENST00000502734 COL15A1P39059 1388 aa12.03□□□□□ -0.48
COPB2-202ENST00000502734 HEG1Q9ULI3 1381 aa12.03□□□□□ -0.48
COPB2-202ENST00000502734 KCNQ3O43525 872 aa12.02□□□□□ -0.49
COPB2-202ENST00000502734 HTATSF1O43719 755 aaKnown RBP12.02□□□□□ -0.49
COPB2-202ENST00000502734 CHRNA5P30532 468 aa12.02□□□□□ -0.49
COPB2-202ENST00000502734 NPM2Q86SE8 214 aaKnown RBP12.02□□□□□ -0.49
COPB2-202ENST00000502734 ADCY9O60503 1353 aa12.02□□□□□ -0.49
COPB2-202ENST00000502734 CEMIPQ8WUJ3 1361 aa12.02□□□□□ -0.49
COPB2-202ENST00000502734 KCPQ6ZWJ8 1503 aa12.01□□□□□ -0.49
COPB2-202ENST00000502734 A1BGP04217 495 aa12.01□□□□□ -0.49
COPB2-202ENST00000502734 IL6STP40189 918 aaPredicted RBP12.01□□□□□ -0.49
COPB2-202ENST00000502734 BICDL1Q6ZP65 573 aa12.01□□□□□ -0.49
COPB2-202ENST00000502734 MCM10Q7L590 875 aa12.01□□□□□ -0.49
COPB2-202ENST00000502734 TBC1D2BQ9UPU7 963 aa12.01□□□□□ -0.49
COPB2-202ENST00000502734 ZNF330Q9Y3S2 320 aaPredicted RBP12.01□□□□□ -0.49
COPB2-202ENST00000502734 C4AP0C0L4 1744 aa12□□□□□ -0.49
COPB2-202ENST00000502734 NEFMP07197 916 aa12□□□□□ -0.49
COPB2-202ENST00000502734 USP16Q9Y5T5 823 aa12□□□□□ -0.49
COPB2-202ENST00000502734 TJP1Q07157 1748 aa12□□□□□ -0.49
COPB2-202ENST00000502734 SNRPA1P09661 255 aaKnown RBP11.99□□□□□ -0.49
COPB2-202ENST00000502734 DCTN1Q14203 1278 aa11.99□□□□□ -0.49
COPB2-202ENST00000502734 TAF7Q15545 349 aaPredicted RBP11.99□□□□□ -0.49
COPB2-202ENST00000502734 C9orf131Q5VYM1 1079 aa11.99□□□□□ -0.49
COPB2-202ENST00000502734 TBC1D9BQ66K14 1250 aa11.99□□□□□ -0.49
COPB2-202ENST00000502734 ADAMTS7Q9UKP4 1686 aa11.99□□□□□ -0.49
COPB2-202ENST00000502734 KIF13BQ9NQT8 1826 aa11.99□□□□□ -0.49
COPB2-202ENST00000502734 H0YIN7 160 aa11.98□□□□□ -0.49
COPB2-202ENST00000502734 N4BP2Q86UW6 1770 aaPredicted RBP11.97□□□□□ -0.49
COPB2-202ENST00000502734 KIF3CO14782 793 aa11.97□□□□□ -0.49
COPB2-202ENST00000502734 C2CD5Q86YS7 1000 aa11.97□□□□□ -0.49
COPB2-202ENST00000502734 TTLL6Q8N841 843 aa11.97□□□□□ -0.49
COPB2-202ENST00000502734 SETDB2Q96T68 719 aa11.97□□□□□ -0.49
COPB2-202ENST00000502734 PNNQ9H307 717 aaKnown RBP11.97□□□□□ -0.49
COPB2-202ENST00000502734 PRAMEF22A3QJZ6 481 aa11.96□□□□□ -0.49
COPB2-202ENST00000502734 CAMTA2O94983 1202 aa11.96□□□□□ -0.49
COPB2-202ENST00000502734 PDE6BP35913 854 aa11.96□□□□□ -0.49
COPB2-202ENST00000502734 DZIP3Q86Y13 1208 aaKnown RBP11.96□□□□□ -0.49
COPB2-202ENST00000502734 BRIP1Q9BX63 1249 aa11.96□□□□□ -0.49
COPB2-202ENST00000502734 MIS18AQ9NYP9 233 aa11.96□□□□□ -0.49
COPB2-202ENST00000502734 PDZRN3Q9UPQ7 1066 aa11.96□□□□□ -0.49
COPB2-202ENST00000502734 PIP4K2AP48426 406 aaPredicted RBP11.95□□□□□ -0.5
COPB2-202ENST00000502734 CLEC4GQ6UXB4 293 aa11.95□□□□□ -0.5
COPB2-202ENST00000502734 PNISRQ8TF01 805 aaKnown RBP11.95□□□□□ -0.5
COPB2-202ENST00000502734 PLEKHF1Q96S99 279 aa11.95□□□□□ -0.5
COPB2-202ENST00000502734 RNF181Q9P0P0 153 aa11.95□□□□□ -0.5
COPB2-202ENST00000502734 KIAA1551Q9HCM1 1747 aa11.94□□□□□ -0.5
COPB2-202ENST00000502734 CEP350Q5VT06 3117 aa11.94□□□□□ -0.5
COPB2-202ENST00000502734 NPHP1O15259 732 aa11.94□□□□□ -0.5
COPB2-202ENST00000502734 TOMM70O94826 608 aa11.94□□□□□ -0.5
COPB2-202ENST00000502734 HSPA6P17066 643 aa11.94□□□□□ -0.5
COPB2-202ENST00000502734 RALBP1Q15311 655 aa11.94□□□□□ -0.5
COPB2-202ENST00000502734 PRR5LQ6MZQ0 368 aa11.94□□□□□ -0.5
COPB2-202ENST00000502734 CCDC24Q8N4L8 307 aa11.94□□□□□ -0.5
COPB2-202ENST00000502734 ZNF622Q969S3 477 aaKnown RBP eCLIP11.94□□□□□ -0.51e-16■□□□□ 9.2
COPB2-202ENST00000502734 VIRMAQ69YN4 1812 aaKnown RBP11.93□□□□□ -0.5
COPB2-202ENST00000502734 NBPF26B4DH59 902 aa11.93□□□□□ -0.5
COPB2-202ENST00000502734 NFE2L2Q16236 605 aa11.93□□□□□ -0.5
COPB2-202ENST00000502734 NBPF10Q6P3W6 841 aaKnown RBP11.93□□□□□ -0.5
COPB2-202ENST00000502734 SAMD1Q6SPF0 538 aaPredicted RBP11.93□□□□□ -0.5
COPB2-202ENST00000502734 NBPF15Q8N660 670 aa11.93□□□□□ -0.5
COPB2-202ENST00000502734 NMRK2Q9NPI5 230 aa11.93□□□□□ -0.5
COPB2-202ENST00000502734 CARMIL3Q8ND23 1372 aa11.92□□□□□ -0.5
COPB2-202ENST00000502734 UBR2Q8IWV8 1755 aa11.92□□□□□ -0.5
COPB2-202ENST00000502734 LMNB1P20700 586 aa11.92□□□□□ -0.5
COPB2-202ENST00000502734 ST5P78524 1137 aa11.92□□□□□ -0.5
COPB2-202ENST00000502734 CNBD1Q8NA66 436 aa11.92□□□□□ -0.5
COPB2-202ENST00000502734 RRAGCQ9HB90 399 aa11.92□□□□□ -0.5
COPB2-202ENST00000502734 ZNF652Q9Y2D9 606 aa11.92□□□□□ -0.5
COPB2-202ENST00000502734 KDM2BQ8NHM5 1336 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms