RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 AIMP1Q12904 312 aaKnown RBP20.19■□□□□ 0.82
HMGXB3-201ENST00000502717 ANKRD44Q8N8A2 993 aa20.19■□□□□ 0.82
HMGXB3-201ENST00000502717 TRIM34Q9BYJ4 488 aa20.19■□□□□ 0.82
HMGXB3-201ENST00000502717 TRMT1Q9NXH9 659 aaKnown RBP20.19■□□□□ 0.82
HMGXB3-201ENST00000502717 ZNF518AQ6AHZ1 1483 aa20.19■□□□□ 0.82
HMGXB3-201ENST00000502717 ERICH2A1L162 156 aa20.19■□□□□ 0.82
HMGXB3-201ENST00000502717 PIP4K2AP48426 406 aaPredicted RBP20.19■□□□□ 0.82
HMGXB3-201ENST00000502717 FBXO31Q5XUX0 539 aaPredicted RBP20.19■□□□□ 0.82
HMGXB3-201ENST00000502717 URI1O94763 535 aaPredicted RBP20.18■□□□□ 0.82
HMGXB3-201ENST00000502717 ZGPATQ8N5A5 531 aaKnown RBP20.18■□□□□ 0.82
HMGXB3-201ENST00000502717 ABCC2Q92887 1545 aa20.18■□□□□ 0.82
HMGXB3-201ENST00000502717 ZNF500O60304 480 aaPredicted RBP20.18■□□□□ 0.82
HMGXB3-201ENST00000502717 GBP3Q9H0R5 595 aa20.18■□□□□ 0.82
HMGXB3-201ENST00000502717 OGFRQ9NZT2 677 aa20.18■□□□□ 0.82
HMGXB3-201ENST00000502717 CCDC186Q7Z3E2 898 aa20.18■□□□□ 0.82
HMGXB3-201ENST00000502717 USP26Q9BXU7 913 aa20.18■□□□□ 0.82
HMGXB3-201ENST00000502717 MBIPQ9NS73 344 aa20.17■□□□□ 0.82
HMGXB3-201ENST00000502717 ANKRD36BQ8N2N9 1353 aa20.17■□□□□ 0.82
HMGXB3-201ENST00000502717 CNPY2Q9Y2B0 182 aa20.17■□□□□ 0.82
HMGXB3-201ENST00000502717 WAPLQ7Z5K2 1190 aa20.17■□□□□ 0.82
HMGXB3-201ENST00000502717 MAPK8IP2Q13387 824 aaPredicted RBP20.17■□□□□ 0.82
HMGXB3-201ENST00000502717 STX1AQ16623 288 aa20.17■□□□□ 0.82
HMGXB3-201ENST00000502717 CFAP100Q494V2 611 aa20.17■□□□□ 0.82
HMGXB3-201ENST00000502717 DCTPP1Q9H773 170 aa20.17■□□□□ 0.82
HMGXB3-201ENST00000502717 GTF2F1P35269 517 aaKnown RBP eCLIP20.16■□□□□ 0.82
HMGXB3-201ENST00000502717 DCTN1Q14203 1278 aa20.16■□□□□ 0.82
HMGXB3-201ENST00000502717 MRPL50Q8N5N7 158 aaKnown RBP20.16■□□□□ 0.82
HMGXB3-201ENST00000502717 ESYT1Q9BSJ8 1104 aa20.16■□□□□ 0.82
HMGXB3-201ENST00000502717 KDM4AO75164 1064 aa20.16■□□□□ 0.82
HMGXB3-201ENST00000502717 SNW1Q13573 536 aaKnown RBP20.16■□□□□ 0.82
HMGXB3-201ENST00000502717 RRS1Q15050 365 aaKnown RBP20.16■□□□□ 0.82
HMGXB3-201ENST00000502717 BBXQ8WY36 941 aaPredicted RBP20.16■□□□□ 0.82
HMGXB3-201ENST00000502717 STRN4Q9NRL3 753 aa20.16■□□□□ 0.82
HMGXB3-201ENST00000502717 POLR3GO15318 223 aaPredicted RBP20.16■□□□□ 0.82
HMGXB3-201ENST00000502717 AMOTL1Q8IY63 956 aa20.16■□□□□ 0.82
HMGXB3-201ENST00000502717 PIBF1Q8WXW3 757 aa20.16■□□□□ 0.82
HMGXB3-201ENST00000502717 PDE1AP54750 535 aa20.15■□□□□ 0.82
HMGXB3-201ENST00000502717 XBP1P17861 261 aa20.15■□□□□ 0.82
HMGXB3-201ENST00000502717 DDX11Q96FC9 970 aa20.15■□□□□ 0.82
HMGXB3-201ENST00000502717 ANTXR1Q9H6X2 564 aa20.15■□□□□ 0.82
HMGXB3-201ENST00000502717 CCDC102AQ96A19 550 aa20.15■□□□□ 0.82
HMGXB3-201ENST00000502717 CTDP1Q9Y5B0 961 aaPredicted RBP20.15■□□□□ 0.82
HMGXB3-201ENST00000502717 RBM33Q96EV2 1170 aaKnown RBP20.15■□□□□ 0.82
HMGXB3-201ENST00000502717 PLEKHM2Q8IWE5 1019 aa20.14■□□□□ 0.82
HMGXB3-201ENST00000502717 CALRP27797 417 aaKnown RBP20.14■□□□□ 0.81
HMGXB3-201ENST00000502717 MCM10Q7L590 875 aa20.14■□□□□ 0.81
HMGXB3-201ENST00000502717 KIAA0754O94854 1291 aa20.14■□□□□ 0.81
HMGXB3-201ENST00000502717 LMBRD1Q9NUN5 540 aa20.14■□□□□ 0.81
HMGXB3-201ENST00000502717 ABCC10Q5T3U5 1492 aa20.13■□□□□ 0.81
HMGXB3-201ENST00000502717 GCC2Q8IWJ2 1684 aa20.13■□□□□ 0.81
HMGXB3-201ENST00000502717 TFIP11Q9UBB9 837 aaKnown RBP20.13■□□□□ 0.81
HMGXB3-201ENST00000502717 PPP1R1BQ9UD71 204 aaPredicted RBP20.13■□□□□ 0.81
HMGXB3-201ENST00000502717 F13A1P00488 732 aa20.13■□□□□ 0.81
HMGXB3-201ENST00000502717 PLEKHO1Q53GL0 409 aaPredicted RBP20.13■□□□□ 0.81
HMGXB3-201ENST00000502717 PRDM11Q9NQV5 511 aa20.13■□□□□ 0.81
HMGXB3-201ENST00000502717 VPS37DQ86XT2 251 aa20.12■□□□□ 0.81
HMGXB3-201ENST00000502717 F6X3S4 739 aa20.12■□□□□ 0.81
HMGXB3-201ENST00000502717 BRPF1P55201 1214 aaPredicted RBP20.12■□□□□ 0.81
HMGXB3-201ENST00000502717 NAP1L1P55209 391 aaKnown RBP20.12■□□□□ 0.81
HMGXB3-201ENST00000502717 ZNF397Q8NF99 534 aaPredicted RBP20.12■□□□□ 0.81
HMGXB3-201ENST00000502717 TRERF1Q96PN7 1200 aa20.12■□□□□ 0.81
HMGXB3-201ENST00000502717 CEP89Q96ST8 783 aa20.12■□□□□ 0.81
HMGXB3-201ENST00000502717 CASQ1P31415 396 aa20.12■□□□□ 0.81
HMGXB3-201ENST00000502717 BRMS1Q9HCU9 246 aa20.12■□□□□ 0.81
HMGXB3-201ENST00000502717 MARCH6O60337 910 aa20.12■□□□□ 0.81
HMGXB3-201ENST00000502717 MAGI3Q5TCQ9 1506 aa20.12■□□□□ 0.81
HMGXB3-201ENST00000502717 TXLNBQ8N3L3 684 aa20.11■□□□□ 0.81
HMGXB3-201ENST00000502717 CCDC150Q8NCX0 1101 aa20.11■□□□□ 0.81
HMGXB3-201ENST00000502717 LARP6Q9BRS8 491 aaKnown RBP20.11■□□□□ 0.81
HMGXB3-201ENST00000502717 SKILP12757 684 aa20.11■□□□□ 0.81
HMGXB3-201ENST00000502717 TUBB4AP04350 444 aa20.11■□□□□ 0.81
HMGXB3-201ENST00000502717 ANO6Q4KMQ2 910 aa20.11■□□□□ 0.81
HMGXB3-201ENST00000502717 GAS2L3Q86XJ1 694 aa20.11■□□□□ 0.81
HMGXB3-201ENST00000502717 LRRFIP2Q9Y608 721 aaKnown RBP20.11■□□□□ 0.81
HMGXB3-201ENST00000502717 C16orf71Q8IYS4 520 aaPredicted RBP20.1■□□□□ 0.81
HMGXB3-201ENST00000502717 SKIDA1Q1XH10 827 aa20.1■□□□□ 0.81
HMGXB3-201ENST00000502717 CARD14Q9BXL6 1004 aa20.1■□□□□ 0.81
HMGXB3-201ENST00000502717 WASLO00401 505 aaPredicted RBP20.1■□□□□ 0.81
HMGXB3-201ENST00000502717 TOP1P11387 765 aaKnown RBP20.1■□□□□ 0.81
HMGXB3-201ENST00000502717 CEP170Q5SW79 1584 aa20.1■□□□□ 0.81
HMGXB3-201ENST00000502717 SLU7O95391 586 aaKnown RBP20.1■□□□□ 0.81
HMGXB3-201ENST00000502717 SPG7Q9UQ90 795 aa20.1■□□□□ 0.81
HMGXB3-201ENST00000502717 ARHGAP29Q52LW3 1261 aa20.09■□□□□ 0.81
HMGXB3-201ENST00000502717 SIL1Q9H173 461 aa20.09■□□□□ 0.81
HMGXB3-201ENST00000502717 NCBP3Q53F19 620 aaKnown RBP20.09■□□□□ 0.81
HMGXB3-201ENST00000502717 JAKMIP3Q5VZ66 844 aa20.09■□□□□ 0.81
HMGXB3-201ENST00000502717 ZNHIT6Q9NWK9 470 aaKnown RBP20.09■□□□□ 0.81
HMGXB3-201ENST00000502717 GOLGA6L9A6NEM1 432 aa20.09■□□□□ 0.81
HMGXB3-201ENST00000502717 SART3Q15020 963 aaKnown RBP20.09■□□□□ 0.81
HMGXB3-201ENST00000502717 MIS18AQ9NYP9 233 aa20.09■□□□□ 0.81
HMGXB3-201ENST00000502717 ZBTB7BO15156 539 aaPredicted RBP20.08■□□□□ 0.81
HMGXB3-201ENST00000502717 TRMT2AQ8IZ69 625 aaKnown RBP20.08■□□□□ 0.8
HMGXB3-201ENST00000502717 TMC6Q7Z403 805 aa20.08■□□□□ 0.8
HMGXB3-201ENST00000502717 CDKL5O76039 1030 aa20.07■□□□□ 0.8
HMGXB3-201ENST00000502717 DDX54Q8TDD1 881 aaKnown RBP20.07■□□□□ 0.8
HMGXB3-201ENST00000502717 POTEB2H3BUK9 544 aa20.07■□□□□ 0.8
HMGXB3-201ENST00000502717 EPB41L2O43491 1005 aaKnown RBP20.07■□□□□ 0.8
HMGXB3-201ENST00000502717 VAMP4O75379 141 aa20.07■□□□□ 0.8
HMGXB3-201ENST00000502717 ATP2B1P20020 1258 aa20.07■□□□□ 0.8
HMGXB3-201ENST00000502717 TSHZ3Q63HK5 1081 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms