RNA–Protein interactions for RNA: ENST00000502492.5

SNF8-202, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNF8, Length 2,319 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-202ENST00000502492 HDGFL1Q5TGJ6 251 aa28.07■■■□□ 2.08
SNF8-202ENST00000502492 CEMIPQ8WUJ3 1361 aa28.07■■■□□ 2.08
SNF8-202ENST00000502492 CCDC173Q0VFZ6 552 aa28.07■■■□□ 2.08
SNF8-202ENST00000502492 DDX17Q92841 729 aaKnown RBP28.07■■■□□ 2.08
SNF8-202ENST00000502492 LTV1Q96GA3 475 aaPredicted RBP28.07■■■□□ 2.08
SNF8-202ENST00000502492 TRIM6-TRIM34B2RNG4 842 aa28.06■■■□□ 2.08
SNF8-202ENST00000502492 CUL4AQ13619 759 aa28.06■■■□□ 2.08
SNF8-202ENST00000502492 RILPL2Q969X0 211 aa28.06■■■□□ 2.08
SNF8-202ENST00000502492 PALD1Q9ULE6 856 aa28.06■■■□□ 2.08
SNF8-202ENST00000502492 ZSCAN23Q3MJ62 389 aa28.06■■■□□ 2.08
SNF8-202ENST00000502492 CAVIN1Q6NZI2 390 aaKnown RBP28.06■■■□□ 2.08
SNF8-202ENST00000502492 EPB41L2O43491 1005 aaKnown RBP28.04■■■□□ 2.08
SNF8-202ENST00000502492 PHAXQ9H814 394 aaKnown RBP28.04■■■□□ 2.08
SNF8-202ENST00000502492 UNC5CLQ8IV45 518 aa28.04■■■□□ 2.08
SNF8-202ENST00000502492 ANO2Q9NQ90 1003 aa28.04■■■□□ 2.08
SNF8-202ENST00000502492 RAB11FIP3O75154 756 aa28.03■■■□□ 2.08
SNF8-202ENST00000502492 PRPF40AO75400 957 aaKnown RBP28.03■■■□□ 2.08
SNF8-202ENST00000502492 POLA2Q14181 598 aa28.03■■■□□ 2.08
SNF8-202ENST00000502492 MED1Q15648 1581 aaPredicted RBP28.03■■■□□ 2.08
SNF8-202ENST00000502492 NCLP19338 710 aaKnown RBP28.02■■■□□ 2.08
SNF8-202ENST00000502492 INTS4Q96HW7 963 aaKnown RBP28.02■■■□□ 2.08
SNF8-202ENST00000502492 USHBP1Q8N6Y0 703 aa28.02■■■□□ 2.08
SNF8-202ENST00000502492 GPT2Q8TD30 523 aa28.02■■■□□ 2.08
SNF8-202ENST00000502492 TRPM3Q9HCF6 1732 aaPredicted RBP28.01■■■□□ 2.07
SNF8-202ENST00000502492 IP6K1Q92551 441 aa28.01■■■□□ 2.07
SNF8-202ENST00000502492 HOXB7P09629 217 aa28■■■□□ 2.07
SNF8-202ENST00000502492 PPP1R42Q7Z4L9 355 aa28■■■□□ 2.07
SNF8-202ENST00000502492 LTN1O94822 1766 aa28■■■□□ 2.07
SNF8-202ENST00000502492 PXDNQ92626 1479 aa28■■■□□ 2.07
SNF8-202ENST00000502492 BRD1O95696 1058 aa28■■■□□ 2.07
SNF8-202ENST00000502492 IL1RAPL2Q9NP60 686 aa28■■■□□ 2.07
SNF8-202ENST00000502492 EIF4A1P60842 406 aaKnown RBP27.99■■■□□ 2.07
SNF8-202ENST00000502492 ANP32BQ92688 251 aaKnown RBP27.98■■■□□ 2.07
SNF8-202ENST00000502492 SURF6O75683 361 aaKnown RBP27.97■■■□□ 2.07
SNF8-202ENST00000502492 NFAT5O94916 1531 aa27.97■■■□□ 2.07
SNF8-202ENST00000502492 RHPN1Q8TCX5 695 aa27.97■■■□□ 2.07
SNF8-202ENST00000502492 NUTM1Q86Y26 1132 aa27.96■■■□□ 2.07
SNF8-202ENST00000502492 CHMP4AQ9BY43 222 aa27.96■■■□□ 2.07
SNF8-202ENST00000502492 NBPF6Q5VWK0 638 aa27.96■■■□□ 2.07
SNF8-202ENST00000502492 PI4K2BQ8TCG2 481 aa27.96■■■□□ 2.07
SNF8-202ENST00000502492 NBPF4Q96M43 638 aa27.96■■■□□ 2.07
SNF8-202ENST00000502492 IL25Q9H293 177 aa27.96■■■□□ 2.07
SNF8-202ENST00000502492 KDM3BQ7LBC6 1761 aa27.96■■■□□ 2.07
SNF8-202ENST00000502492 SOS2Q07890 1332 aaPredicted RBP27.95■■■□□ 2.07
SNF8-202ENST00000502492 TOM1O60784 492 aa27.95■■■□□ 2.07
SNF8-202ENST00000502492 HSPA4P34932 840 aa27.95■■■□□ 2.07
SNF8-202ENST00000502492 LGR6Q9HBX8 967 aa27.95■■■□□ 2.07
SNF8-202ENST00000502492 BEND3Q5T5X7 828 aa27.95■■■□□ 2.06
SNF8-202ENST00000502492 CHAMP1Q96JM3 812 aa27.94■■■□□ 2.06
SNF8-202ENST00000502492 NBPF7P0C2Y1 421 aaPredicted RBP27.93■■■□□ 2.06
SNF8-202ENST00000502492 EIF2S2P20042 333 aaKnown RBP27.93■■■□□ 2.06
SNF8-202ENST00000502492 LMOD2Q6P5Q4 547 aa27.93■■■□□ 2.06
SNF8-202ENST00000502492 CERKQ8TCT0 537 aa27.93■■■□□ 2.06
SNF8-202ENST00000502492 KIF1BPQ96EK5 621 aa27.93■■■□□ 2.06
SNF8-202ENST00000502492 RBSNQ9H1K0 784 aa27.93■■■□□ 2.06
SNF8-202ENST00000502492 SRGAP3O43295 1099 aa27.93■■■□□ 2.06
SNF8-202ENST00000502492 PRIM1P49642 420 aaKnown RBP27.93■■■□□ 2.06
SNF8-202ENST00000502492 DNAAF4Q8WXU2 420 aa27.93■■■□□ 2.06
SNF8-202ENST00000502492 CHPF2Q9P2E5 772 aa27.93■■■□□ 2.06
SNF8-202ENST00000502492 RBM27Q9P2N5 1060 aaKnown RBP27.93■■■□□ 2.06
SNF8-202ENST00000502492 ROBO1Q9Y6N7 1651 aa27.92■■■□□ 2.06
SNF8-202ENST00000502492 TNS3Q68CZ2 1445 aa27.92■■■□□ 2.06
SNF8-202ENST00000502492 NAP1L5Q96NT1 182 aaPredicted RBP27.92■■■□□ 2.06
SNF8-202ENST00000502492 TMEM63CQ9P1W3 806 aa27.92■■■□□ 2.06
SNF8-202ENST00000502492 SPATA31A3Q5VYP0 1347 aa27.92■■■□□ 2.06
SNF8-202ENST00000502492 ALS2Q96Q42 1657 aa27.91■■■□□ 2.06
SNF8-202ENST00000502492 MBD3O95983 291 aa27.91■■■□□ 2.06
SNF8-202ENST00000502492 UPF3BQ9BZI7 483 aaKnown RBP27.91■■■□□ 2.06
SNF8-202ENST00000502492 NHSL1Q5SYE7 1610 aa27.91■■■□□ 2.06
SNF8-202ENST00000502492 PI4KAP2A4QPH2 592 aa27.91■■■□□ 2.06
SNF8-202ENST00000502492 PI4KAP1Q8N8J0 262 aa27.91■■■□□ 2.06
SNF8-202ENST00000502492 SGSM2O43147 1006 aa27.9■■■□□ 2.06
SNF8-202ENST00000502492 LMO7Q8WWI1 1683 aa27.9■■■□□ 2.06
SNF8-202ENST00000502492 FOXD4L5Q5VV16 416 aaPredicted RBP27.9■■■□□ 2.06
SNF8-202ENST00000502492 FOXD4L4Q8WXT5 416 aaPredicted RBP27.9■■■□□ 2.06
SNF8-202ENST00000502492 NSFL1CQ9UNZ2 370 aaKnown RBP27.9■■■□□ 2.06
SNF8-202ENST00000502492 PLEKHG5O94827 1062 aa27.89■■■□□ 2.06
SNF8-202ENST00000502492 RAD50Q92878 1312 aa27.89■■■□□ 2.06
SNF8-202ENST00000502492 UBAP1LF5GYI3 381 aa27.89■■■□□ 2.05
SNF8-202ENST00000502492 HSP90AB4PQ58FF6 505 aa27.89■■■□□ 2.05
SNF8-202ENST00000502492 LRSAM1Q6UWE0 723 aa27.89■■■□□ 2.05
SNF8-202ENST00000502492 ZSCAN30Q86W11 494 aa27.89■■■□□ 2.05
SNF8-202ENST00000502492 USP42Q9H9J4 1324 aaKnown RBP27.88■■■□□ 2.05
SNF8-202ENST00000502492 PHRF1Q9P1Y6 1649 aaKnown RBP27.88■■■□□ 2.05
SNF8-202ENST00000502492 KCNQ3O43525 872 aa27.88■■■□□ 2.05
SNF8-202ENST00000502492 AKAP4Q5JQC9 854 aa27.88■■■□□ 2.05
SNF8-202ENST00000502492 NOL8Q76FK4 1167 aaKnown RBP27.88■■■□□ 2.05
SNF8-202ENST00000502492 ADCY9O60503 1353 aa27.88■■■□□ 2.05
SNF8-202ENST00000502492 PDLIM2Q96JY6 352 aa27.87■■■□□ 2.05
SNF8-202ENST00000502492 KCNH5Q8NCM2 988 aa27.87■■■□□ 2.05
SNF8-202ENST00000502492 CRYBG1Q9Y4K1 1723 aa27.87■■■□□ 2.05
SNF8-202ENST00000502492 MAP4K4O95819 1239 aaPredicted RBP27.86■■■□□ 2.05
SNF8-202ENST00000502492 HS1BP3Q53T59 392 aa27.86■■■□□ 2.05
SNF8-202ENST00000502492 CNTROBQ8N137 903 aa27.86■■■□□ 2.05
SNF8-202ENST00000502492 MTX1Q13505 466 aa27.85■■■□□ 2.05
SNF8-202ENST00000502492 LSG1Q9H089 658 aaKnown RBP27.85■■■□□ 2.05
SNF8-202ENST00000502492 BTBD11A6QL63 1104 aa27.85■■■□□ 2.05
SNF8-202ENST00000502492 PIP4K2BP78356 416 aa27.85■■■□□ 2.05
SNF8-202ENST00000502492 TEFQ10587 303 aa27.85■■■□□ 2.05
SNF8-202ENST00000502492 AHDC1Q5TGY3 1603 aaPredicted RBP27.84■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms