RNA–Protein interactions for RNA: ENST00000502299.5

CLDND1-206, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-206ENST00000502299 CNTNAP4Q9C0A0 1308 aa18.97■□□□□ 0.63
CLDND1-206ENST00000502299 KIAA1551Q9HCM1 1747 aa18.97■□□□□ 0.63
CLDND1-206ENST00000502299 VIRMAQ69YN4 1812 aaKnown RBP18.96■□□□□ 0.63
CLDND1-206ENST00000502299 RPS6KA4O75676 772 aa18.96■□□□□ 0.63
CLDND1-206ENST00000502299 DPEP1P16444 411 aa18.96■□□□□ 0.63
CLDND1-206ENST00000502299 ADRA2BP18089 450 aa18.96■□□□□ 0.63
CLDND1-206ENST00000502299 RIPK4P57078 832 aa18.96■□□□□ 0.63
CLDND1-206ENST00000502299 ZNF790Q6PG37 636 aa18.96■□□□□ 0.63
CLDND1-206ENST00000502299 ZNF831Q5JPB2 1677 aa18.95■□□□□ 0.62
CLDND1-206ENST00000502299 TMPOP42166 694 aaKnown RBP18.95■□□□□ 0.62
CLDND1-206ENST00000502299 TAF7Q15545 349 aaPredicted RBP18.95■□□□□ 0.62
CLDND1-206ENST00000502299 CCDC146Q8IYE0 955 aa18.95■□□□□ 0.62
CLDND1-206ENST00000502299 VSIG10Q8N0Z9 540 aa18.95■□□□□ 0.62
CLDND1-206ENST00000502299 RFC4P35249 363 aa18.94■□□□□ 0.62
CLDND1-206ENST00000502299 CCDC184Q52MB2 194 aa18.94■□□□□ 0.62
CLDND1-206ENST00000502299 KIF13BQ9NQT8 1826 aa18.94■□□□□ 0.62
CLDND1-206ENST00000502299 KCNA3P22001 575 aa18.93■□□□□ 0.62
CLDND1-206ENST00000502299 LMOD3Q0VAK6 560 aa18.93■□□□□ 0.62
CLDND1-206ENST00000502299 ARHGAP27Q6ZUM4 889 aa18.93■□□□□ 0.62
CLDND1-206ENST00000502299 MRS2Q9HD23 443 aa18.93■□□□□ 0.62
CLDND1-206ENST00000502299 CCDC87Q9NVE4 849 aa18.93■□□□□ 0.62
CLDND1-206ENST00000502299 N4BP2Q86UW6 1770 aaPredicted RBP18.92■□□□□ 0.62
CLDND1-206ENST00000502299 PNISRQ8TF01 805 aaKnown RBP18.92■□□□□ 0.62
CLDND1-206ENST00000502299 FMNL2Q96PY5 1086 aa18.92■□□□□ 0.62
CLDND1-206ENST00000502299 NEUROD2Q15784 382 aa18.91■□□□□ 0.62
CLDND1-206ENST00000502299 DNAJC10Q8IXB1 793 aa18.91■□□□□ 0.62
CLDND1-206ENST00000502299 ZNF496Q96IT1 587 aaPredicted RBP18.91■□□□□ 0.62
CLDND1-206ENST00000502299 TEX13AQ9BXU3 409 aaPredicted RBP18.91■□□□□ 0.62
CLDND1-206ENST00000502299 PARP3Q9Y6F1 533 aa18.91■□□□□ 0.62
CLDND1-206ENST00000502299 C4AP0C0L4 1744 aa18.91■□□□□ 0.62
CLDND1-206ENST00000502299 COL5A3P25940 1745 aaPredicted RBP18.91■□□□□ 0.62
CLDND1-206ENST00000502299 CRKLP46109 303 aaKnown RBP18.9■□□□□ 0.62
CLDND1-206ENST00000502299 SRP68Q9UHB9 627 aaKnown RBP18.9■□□□□ 0.62
CLDND1-206ENST00000502299 SIPA1L3O60292 1781 aaPredicted RBP18.89■□□□□ 0.61
CLDND1-206ENST00000502299 KCNQ3O43525 872 aa18.89■□□□□ 0.61
CLDND1-206ENST00000502299 TOMM70O94826 608 aa18.89■□□□□ 0.61
CLDND1-206ENST00000502299 CYP19A1P11511 503 aaPredicted RBP18.89■□□□□ 0.61
CLDND1-206ENST00000502299 NMRK2Q9NPI5 230 aa18.89■□□□□ 0.61
CLDND1-206ENST00000502299 RRP7AQ9Y3A4 280 aaKnown RBP18.89■□□□□ 0.61
CLDND1-206ENST00000502299 DLG5Q8TDM6 1919 aa18.89■□□□□ 0.61
CLDND1-206ENST00000502299 HEG1Q9ULI3 1381 aa18.89■□□□□ 0.61
CLDND1-206ENST00000502299 KCPQ6ZWJ8 1503 aa18.89■□□□□ 0.61
CLDND1-206ENST00000502299 MYH14Q7Z406 1995 aaKnown RBP18.88■□□□□ 0.61
CLDND1-206ENST00000502299 STARD3NLO95772 234 aa18.88■□□□□ 0.61
CLDND1-206ENST00000502299 DDR1Q08345 913 aa18.88■□□□□ 0.61
CLDND1-206ENST00000502299 FKBP8Q14318 412 aa18.88■□□□□ 0.61
CLDND1-206ENST00000502299 THUMPD2Q9BTF0 503 aaKnown RBP18.88■□□□□ 0.61
CLDND1-206ENST00000502299 INTS5Q6P9B9 1019 aaKnown RBP18.87■□□□□ 0.61
CLDND1-206ENST00000502299 DNAJC5GQ8N7S2 189 aa18.87■□□□□ 0.61
CLDND1-206ENST00000502299 USP42Q9H9J4 1324 aaKnown RBP18.87■□□□□ 0.61
CLDND1-206ENST00000502299 MIS18AQ9NYP9 233 aa18.87■□□□□ 0.61
CLDND1-206ENST00000502299 APAF1O14727 1248 aa18.86■□□□□ 0.61
CLDND1-206ENST00000502299 APLP1P51693 650 aa18.86■□□□□ 0.61
CLDND1-206ENST00000502299 C9orf131Q5VYM1 1079 aa18.86■□□□□ 0.61
CLDND1-206ENST00000502299 UBR2Q8IWV8 1755 aa18.86■□□□□ 0.61
CLDND1-206ENST00000502299 SNRPA1P09661 255 aaKnown RBP18.85■□□□□ 0.61
CLDND1-206ENST00000502299 BABAM1Q9NWV8 329 aa18.85■□□□□ 0.61
CLDND1-206ENST00000502299 PIM2Q9P1W9 311 aa18.85■□□□□ 0.61
CLDND1-206ENST00000502299 TRIM35Q9UPQ4 493 aa18.85■□□□□ 0.61
CLDND1-206ENST00000502299 TJP1Q07157 1748 aa18.84■□□□□ 0.61
CLDND1-206ENST00000502299 CHRNA5P30532 468 aa18.84■□□□□ 0.61
CLDND1-206ENST00000502299 TM4SF1P30408 202 aa18.83■□□□□ 0.6
CLDND1-206ENST00000502299 DALRD3Q5D0E6 543 aaKnown RBP18.83■□□□□ 0.6
CLDND1-206ENST00000502299 BRCA1P38398 1863 aaKnown RBP18.83■□□□□ 0.6
CLDND1-206ENST00000502299 POLRMTO00411 1230 aaKnown RBP18.82■□□□□ 0.6
CLDND1-206ENST00000502299 TSPYL4Q9UJ04 414 aa18.82■□□□□ 0.6
CLDND1-206ENST00000502299 USP16Q9Y5T5 823 aa18.82■□□□□ 0.6
CLDND1-206ENST00000502299 CANXP27824 592 aaKnown RBP18.81■□□□□ 0.6
CLDND1-206ENST00000502299 EIF4A1P60842 406 aaKnown RBP18.81■□□□□ 0.6
CLDND1-206ENST00000502299 ZBTB1Q9Y2K1 713 aa18.81■□□□□ 0.6
CLDND1-206ENST00000502299 SOS1Q07889 1333 aaPredicted RBP18.8■□□□□ 0.6
CLDND1-206ENST00000502299 USPL1Q5W0Q7 1092 aa18.8■□□□□ 0.6
CLDND1-206ENST00000502299 RBM46Q8TBY0 533 aaKnown RBP18.8■□□□□ 0.6
CLDND1-206ENST00000502299 CALD1Q05682 793 aaKnown RBP18.79■□□□□ 0.6
CLDND1-206ENST00000502299 NPM2Q86SE8 214 aaKnown RBP18.79■□□□□ 0.6
CLDND1-206ENST00000502299 FAM9BQ8IZU0 186 aa18.79■□□□□ 0.6
CLDND1-206ENST00000502299 RNF181Q9P0P0 153 aa18.79■□□□□ 0.6
CLDND1-206ENST00000502299 A0A087WZG4 1122 aa18.78■□□□□ 0.6
CLDND1-206ENST00000502299 PRAMEF22A3QJZ6 481 aa18.78■□□□□ 0.6
CLDND1-206ENST00000502299 CHL1O00533 1208 aa18.78■□□□□ 0.6
CLDND1-206ENST00000502299 ZPR1O75312 459 aa18.78■□□□□ 0.6
CLDND1-206ENST00000502299 A1BGP04217 495 aa18.78■□□□□ 0.6
CLDND1-206ENST00000502299 EIF5P55010 431 aaKnown RBP18.78■□□□□ 0.6
CLDND1-206ENST00000502299 HTRA3P83110 453 aa18.78■□□□□ 0.6
CLDND1-206ENST00000502299 LAS1LQ9Y4W2 734 aaKnown RBP18.78■□□□□ 0.6
CLDND1-206ENST00000502299 ARFGEF1Q9Y6D6 1849 aa18.77■□□□□ 0.6
CLDND1-206ENST00000502299 IL6STP40189 918 aaPredicted RBP18.77■□□□□ 0.6
CLDND1-206ENST00000502299 NCBP3Q53F19 620 aaKnown RBP18.77■□□□□ 0.6
CLDND1-206ENST00000502299 CFAP44Q96MT7 982 aa18.77■□□□□ 0.6
CLDND1-206ENST00000502299 NFIXQ14938 502 aa18.76■□□□□ 0.59
CLDND1-206ENST00000502299 CCDC27Q2M243 656 aa18.76■□□□□ 0.59
CLDND1-206ENST00000502299 BCL2L12Q9HB09 334 aa18.76■□□□□ 0.59
CLDND1-206ENST00000502299 RRAGCQ9HB90 399 aa18.76■□□□□ 0.59
CLDND1-206ENST00000502299 NARFQ9UHQ1 456 aa18.76■□□□□ 0.59
CLDND1-206ENST00000502299 CCER2I3L3R5 266 aa18.75■□□□□ 0.59
CLDND1-206ENST00000502299 DIEXFQ68CQ4 756 aaKnown RBP18.75■□□□□ 0.59
CLDND1-206ENST00000502299 COL15A1P39059 1388 aa18.75■□□□□ 0.59
CLDND1-206ENST00000502299 KDM3BQ7LBC6 1761 aa18.75■□□□□ 0.59
CLDND1-206ENST00000502299 KDM2BQ8NHM5 1336 aa18.74■□□□□ 0.59
CLDND1-206ENST00000502299 C16orf71Q8IYS4 520 aaPredicted RBP18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms