RNA–Protein interactions for RNA: ENST00000498872.2

AP004609.1-201, humanhuman

TSL 1 (best) BASIC

Gene AP004609.1, Length 1,646 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004609.1-201ENST00000498872 FAM9BQ8IZU0 186 aa22.58■■□□□ 1.21
AP004609.1-201ENST00000498872 RSPH6AQ9H0K4 717 aa22.58■■□□□ 1.21
AP004609.1-201ENST00000498872 C10orf71Q711Q0 1435 aa22.58■■□□□ 1.2
AP004609.1-201ENST00000498872 U2AF1L5P0DN76 240 aaPredicted RBP22.57■■□□□ 1.2
AP004609.1-201ENST00000498872 U2AF1Q01081 240 aaKnown RBP eCLIP22.57■■□□□ 1.2
AP004609.1-201ENST00000498872 TTC5Q8N0Z6 440 aa22.57■■□□□ 1.2
AP004609.1-201ENST00000498872 ZBTB1Q9Y2K1 713 aa22.57■■□□□ 1.2
AP004609.1-201ENST00000498872 SOS1Q07889 1333 aaPredicted RBP22.56■■□□□ 1.2
AP004609.1-201ENST00000498872 NUDCQ9Y266 331 aa22.56■■□□□ 1.2
AP004609.1-201ENST00000498872 USPL1Q5W0Q7 1092 aa22.55■■□□□ 1.2
AP004609.1-201ENST00000498872 DDR1Q08345 913 aa22.54■■□□□ 1.2
AP004609.1-201ENST00000498872 COL15A1P39059 1388 aa22.54■■□□□ 1.2
AP004609.1-201ENST00000498872 BRCA1P38398 1863 aaKnown RBP22.54■■□□□ 1.2
AP004609.1-201ENST00000498872 ZPR1O75312 459 aa22.53■■□□□ 1.2
AP004609.1-201ENST00000498872 DPEP1P16444 411 aa22.53■■□□□ 1.2
AP004609.1-201ENST00000498872 CANXP27824 592 aaKnown RBP22.53■■□□□ 1.2
AP004609.1-201ENST00000498872 TGFB2P61812 414 aa22.53■■□□□ 1.2
AP004609.1-201ENST00000498872 ZNF496Q96IT1 587 aaPredicted RBP22.53■■□□□ 1.2
AP004609.1-201ENST00000498872 BCS1LQ9Y276 419 aa22.53■■□□□ 1.2
AP004609.1-201ENST00000498872 ZNF790Q6PG37 636 aa22.53■■□□□ 1.2
AP004609.1-201ENST00000498872 VSIG10Q8N0Z9 540 aa22.53■■□□□ 1.2
AP004609.1-201ENST00000498872 ATP10DQ9P241 1426 aa22.52■■□□□ 1.2
AP004609.1-201ENST00000498872 CEMIPQ8WUJ3 1361 aa22.5■■□□□ 1.19
AP004609.1-201ENST00000498872 GIGYF1O75420 1035 aaPredicted RBP22.5■■□□□ 1.19
AP004609.1-201ENST00000498872 ZNF526Q8TF50 670 aaPredicted RBP22.5■■□□□ 1.19
AP004609.1-201ENST00000498872 AFDNP55196 1824 aaKnown RBP22.5■■□□□ 1.19
AP004609.1-201ENST00000498872 HEG1Q9ULI3 1381 aa22.5■■□□□ 1.19
AP004609.1-201ENST00000498872 POLRMTO00411 1230 aaKnown RBP22.49■■□□□ 1.19
AP004609.1-201ENST00000498872 KCNQ3O43525 872 aa22.49■■□□□ 1.19
AP004609.1-201ENST00000498872 C1QTNF8P60827 252 aa22.49■■□□□ 1.19
AP004609.1-201ENST00000498872 PNISRQ8TF01 805 aaKnown RBP22.49■■□□□ 1.19
AP004609.1-201ENST00000498872 ZBED9Q6R2W3 1325 aa22.49■■□□□ 1.19
AP004609.1-201ENST00000498872 TM4SF1P30408 202 aa22.49■■□□□ 1.19
AP004609.1-201ENST00000498872 MCM10Q7L590 875 aa22.49■■□□□ 1.19
AP004609.1-201ENST00000498872 NARFQ9UHQ1 456 aa22.49■■□□□ 1.19
AP004609.1-201ENST00000498872 BTBD11A6QL63 1104 aa22.48■■□□□ 1.19
AP004609.1-201ENST00000498872 STARD3NLO95772 234 aa22.48■■□□□ 1.19
AP004609.1-201ENST00000498872 ZNF330Q9Y3S2 320 aaPredicted RBP22.48■■□□□ 1.19
AP004609.1-201ENST00000498872 FCHSD2O94868 740 aa22.47■■□□□ 1.19
AP004609.1-201ENST00000498872 KCNA3P22001 575 aa22.47■■□□□ 1.19
AP004609.1-201ENST00000498872 DCTN1Q14203 1278 aa22.47■■□□□ 1.19
AP004609.1-201ENST00000498872 BCL2L12Q9HB09 334 aa22.47■■□□□ 1.19
AP004609.1-201ENST00000498872 ADCY9O60503 1353 aa22.47■■□□□ 1.19
AP004609.1-201ENST00000498872 NFIXQ14938 502 aa22.46■■□□□ 1.19
AP004609.1-201ENST00000498872 CHRNA5P30532 468 aa22.46■■□□□ 1.19
AP004609.1-201ENST00000498872 RTF1Q92541 710 aaKnown RBP22.46■■□□□ 1.19
AP004609.1-201ENST00000498872 FMNL2Q96PY5 1086 aa22.46■■□□□ 1.19
AP004609.1-201ENST00000498872 DLG5Q8TDM6 1919 aa22.45■■□□□ 1.18
AP004609.1-201ENST00000498872 ARHGAP27Q6ZUM4 889 aa22.45■■□□□ 1.18
AP004609.1-201ENST00000498872 ARFGEF1Q9Y6D6 1849 aa22.44■■□□□ 1.18
AP004609.1-201ENST00000498872 EIF5P55010 431 aaKnown RBP22.44■■□□□ 1.18
AP004609.1-201ENST00000498872 BICDL1Q6ZP65 573 aa22.44■■□□□ 1.18
AP004609.1-201ENST00000498872 GPBP1L1Q9HC44 474 aaPredicted RBP22.44■■□□□ 1.18
AP004609.1-201ENST00000498872 SENP3-EIF4A1A0A087X0R7 540 aa22.43■■□□□ 1.18
AP004609.1-201ENST00000498872 A1BGP04217 495 aa22.43■■□□□ 1.18
AP004609.1-201ENST00000498872 NRXN2Q9P2S2 1712 aa22.43■■□□□ 1.18
AP004609.1-201ENST00000498872 TEX13AQ9BXU3 409 aaPredicted RBP22.42■■□□□ 1.18
AP004609.1-201ENST00000498872 PIM2Q9P1W9 311 aa22.42■■□□□ 1.18
AP004609.1-201ENST00000498872 TBC1D2BQ9UPU7 963 aa22.42■■□□□ 1.18
AP004609.1-201ENST00000498872 PRAMEF22A3QJZ6 481 aa22.42■■□□□ 1.18
AP004609.1-201ENST00000498872 PIP4K2AP48426 406 aaPredicted RBP22.42■■□□□ 1.18
AP004609.1-201ENST00000498872 SCN7AQ01118 1682 aa22.41■■□□□ 1.18
AP004609.1-201ENST00000498872 SERPINB2P05120 415 aa22.41■■□□□ 1.18
AP004609.1-201ENST00000498872 SUPT16HQ9Y5B9 1047 aaKnown RBP22.41■■□□□ 1.18
AP004609.1-201ENST00000498872 USP16Q9Y5T5 823 aa22.4■■□□□ 1.18
AP004609.1-201ENST00000498872 DALRD3Q5D0E6 543 aaKnown RBP22.39■■□□□ 1.18
AP004609.1-201ENST00000498872 TBC1D9BQ66K14 1250 aa22.39■■□□□ 1.17
AP004609.1-201ENST00000498872 CARMIL3Q8ND23 1372 aa22.38■■□□□ 1.17
AP004609.1-201ENST00000498872 A0A087WZG4 1122 aa22.38■■□□□ 1.17
AP004609.1-201ENST00000498872 IL6STP40189 918 aaPredicted RBP22.38■■□□□ 1.17
AP004609.1-201ENST00000498872 MIS18AQ9NYP9 233 aa22.38■■□□□ 1.17
AP004609.1-201ENST00000498872 DLEC1Q9Y238 1755 aa22.37■■□□□ 1.17
AP004609.1-201ENST00000498872 BCORQ6W2J9 1755 aa22.36■■□□□ 1.17
AP004609.1-201ENST00000498872 NEFMP07197 916 aa22.35■■□□□ 1.17
AP004609.1-201ENST00000498872 NPM2Q86SE8 214 aaKnown RBP22.35■■□□□ 1.17
AP004609.1-201ENST00000498872 CCDC24Q8N4L8 307 aa22.35■■□□□ 1.17
AP004609.1-201ENST00000498872 ANKRD31Q8N7Z5 1873 aa22.35■■□□□ 1.17
AP004609.1-201ENST00000498872 HTATSF1O43719 755 aaKnown RBP22.35■■□□□ 1.17
AP004609.1-201ENST00000498872 PLEKHF1Q96S99 279 aa22.35■■□□□ 1.17
AP004609.1-201ENST00000498872 SNRPA1P09661 255 aaKnown RBP22.34■■□□□ 1.17
AP004609.1-201ENST00000498872 TAF7Q15545 349 aaPredicted RBP22.33■■□□□ 1.17
AP004609.1-201ENST00000498872 DZIP3Q86Y13 1208 aaKnown RBP22.33■■□□□ 1.17
AP004609.1-201ENST00000498872 THUMPD2Q9BTF0 503 aaKnown RBP22.33■■□□□ 1.17
AP004609.1-201ENST00000498872 NEFLP07196 543 aa22.32■■□□□ 1.16
AP004609.1-201ENST00000498872 KDM3BQ7LBC6 1761 aa22.32■■□□□ 1.16
AP004609.1-201ENST00000498872 SBF1O95248 1867 aa22.32■■□□□ 1.16
AP004609.1-201ENST00000498872 CAMTA2O94983 1202 aa22.31■■□□□ 1.16
AP004609.1-201ENST00000498872 C9orf131Q5VYM1 1079 aa22.31■■□□□ 1.16
AP004609.1-201ENST00000498872 C2CD5Q86YS7 1000 aa22.31■■□□□ 1.16
AP004609.1-201ENST00000498872 CEP350Q5VT06 3117 aa22.31■■□□□ 1.16
AP004609.1-201ENST00000498872 LAMB4A4D0S4 1761 aa22.31■■□□□ 1.16
AP004609.1-201ENST00000498872 COL11A2P13942 1736 aaPredicted RBP22.3■■□□□ 1.16
AP004609.1-201ENST00000498872 NFE2L2Q16236 605 aa22.3■■□□□ 1.16
AP004609.1-201ENST00000498872 MAPK8IP3Q9UPT6 1336 aa22.3■■□□□ 1.16
AP004609.1-201ENST00000498872 PRR5LQ6MZQ0 368 aa22.29■■□□□ 1.16
AP004609.1-201ENST00000498872 CACNA1SQ13698 1873 aa22.29■■□□□ 1.16
AP004609.1-201ENST00000498872 NBPF26B4DH59 902 aa22.28■■□□□ 1.16
AP004609.1-201ENST00000498872 H0YIN7 160 aa22.28■■□□□ 1.16
AP004609.1-201ENST00000498872 NBPF10Q6P3W6 841 aaKnown RBP22.28■■□□□ 1.16
AP004609.1-201ENST00000498872 NBPF15Q8N660 670 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms