RNA–Protein interactions for RNA: ENST00000498698.1

HMGCL-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 3

Gene HMGCL, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-207ENST00000498698 FMNL2Q96PY5 1086 aa12.61□□□□□ -0.39
HMGCL-207ENST00000498698 BCL2L12Q9HB09 334 aa12.61□□□□□ -0.39
HMGCL-207ENST00000498698 COL5A3P25940 1745 aaPredicted RBP12.61□□□□□ -0.39
HMGCL-207ENST00000498698 CICQ96RK0 1608 aaPredicted RBP12.61□□□□□ -0.39
HMGCL-207ENST00000498698 PXDNLA1KZ92 1463 aa12.6□□□□□ -0.39
HMGCL-207ENST00000498698 COL15A1P39059 1388 aa12.6□□□□□ -0.39
HMGCL-207ENST00000498698 MYH14Q7Z406 1995 aaKnown RBP12.6□□□□□ -0.39
HMGCL-207ENST00000498698 POLRMTO00411 1230 aaKnown RBP12.6□□□□□ -0.39
HMGCL-207ENST00000498698 DPEP1P16444 411 aa12.6□□□□□ -0.39
HMGCL-207ENST00000498698 DCTN1Q14203 1278 aa12.6□□□□□ -0.39
HMGCL-207ENST00000498698 RALBP1Q15311 655 aa12.6□□□□□ -0.39
HMGCL-207ENST00000498698 PLEKHF1Q96S99 279 aa12.6□□□□□ -0.39
HMGCL-207ENST00000498698 TJP1Q07157 1748 aa12.59□□□□□ -0.39
HMGCL-207ENST00000498698 KCNA3P22001 575 aa12.59□□□□□ -0.39
HMGCL-207ENST00000498698 NFIXQ14938 502 aa12.59□□□□□ -0.39
HMGCL-207ENST00000498698 A1BGP04217 495 aa12.58□□□□□ -0.4
HMGCL-207ENST00000498698 USP16Q9Y5T5 823 aa12.58□□□□□ -0.4
HMGCL-207ENST00000498698 A0A087WZG4 1122 aa12.57□□□□□ -0.4
HMGCL-207ENST00000498698 NEFMP07197 916 aa12.57□□□□□ -0.4
HMGCL-207ENST00000498698 IL6STP40189 918 aaPredicted RBP12.57□□□□□ -0.4
HMGCL-207ENST00000498698 TAF7Q15545 349 aaPredicted RBP12.57□□□□□ -0.4
HMGCL-207ENST00000498698 GOLGB1Q14789 3259 aaKnown RBP12.57□□□□□ -0.4
HMGCL-207ENST00000498698 PRAMEF22A3QJZ6 481 aa12.56□□□□□ -0.4
HMGCL-207ENST00000498698 SNRPA1P09661 255 aaKnown RBP12.56□□□□□ -0.4
HMGCL-207ENST00000498698 NFE2L2Q16236 605 aa12.56□□□□□ -0.4
HMGCL-207ENST00000498698 BCS1LQ9Y276 419 aa12.56□□□□□ -0.4
HMGCL-207ENST00000498698 SERPINB2P05120 415 aa12.55□□□□□ -0.4
HMGCL-207ENST00000498698 PNNQ9H307 717 aaKnown RBP12.55□□□□□ -0.4
HMGCL-207ENST00000498698 MIS18AQ9NYP9 233 aa12.55□□□□□ -0.4
HMGCL-207ENST00000498698 PIM2Q9P1W9 311 aa12.55□□□□□ -0.4
HMGCL-207ENST00000498698 TBC1D2BQ9UPU7 963 aa12.55□□□□□ -0.4
HMGCL-207ENST00000498698 C4AP0C0L4 1744 aa12.54□□□□□ -0.4
HMGCL-207ENST00000498698 CHRNA5P30532 468 aa12.54□□□□□ -0.4
HMGCL-207ENST00000498698 TBC1D9BQ66K14 1250 aa12.54□□□□□ -0.4
HMGCL-207ENST00000498698 ZNF330Q9Y3S2 320 aaPredicted RBP12.54□□□□□ -0.4
HMGCL-207ENST00000498698 ADCY9O60503 1353 aa12.54□□□□□ -0.4
HMGCL-207ENST00000498698 CAMTA2O94983 1202 aa12.53□□□□□ -0.4
HMGCL-207ENST00000498698 PIP4K2AP48426 406 aaPredicted RBP12.53□□□□□ -0.4
HMGCL-207ENST00000498698 BICDL1Q6ZP65 573 aa12.53□□□□□ -0.4
HMGCL-207ENST00000498698 PNISRQ8TF01 805 aaKnown RBP12.53□□□□□ -0.4
HMGCL-207ENST00000498698 THUMPD2Q9BTF0 503 aaKnown RBP12.53□□□□□ -0.4
HMGCL-207ENST00000498698 MYBBP1AQ9BQG0 1328 aaKnown RBP12.53□□□□□ -0.4
HMGCL-207ENST00000498698 UBR2Q8IWV8 1755 aa12.53□□□□□ -0.4
HMGCL-207ENST00000498698 ATP10DQ9P241 1426 aa12.53□□□□□ -0.4
HMGCL-207ENST00000498698 NBPF26B4DH59 902 aa12.52□□□□□ -0.41
HMGCL-207ENST00000498698 C1QTNF8P60827 252 aa12.52□□□□□ -0.41
HMGCL-207ENST00000498698 DALRD3Q5D0E6 543 aaKnown RBP12.52□□□□□ -0.41
HMGCL-207ENST00000498698 NBPF10Q6P3W6 841 aaKnown RBP12.52□□□□□ -0.41
HMGCL-207ENST00000498698 ARHGAP27Q6ZUM4 889 aa12.52□□□□□ -0.41
HMGCL-207ENST00000498698 DZIP3Q86Y13 1208 aaKnown RBP12.52□□□□□ -0.41
HMGCL-207ENST00000498698 NBPF15Q8N660 670 aa12.52□□□□□ -0.41
HMGCL-207ENST00000498698 MAPK8IP3Q9UPT6 1336 aa12.52□□□□□ -0.41
HMGCL-207ENST00000498698 EIF4A1P60842 406 aaKnown RBP12.51□□□□□ -0.41
HMGCL-207ENST00000498698 NPM2Q86SE8 214 aaKnown RBP12.51□□□□□ -0.41
HMGCL-207ENST00000498698 GIGYF1O75420 1035 aaPredicted RBP12.5□□□□□ -0.41
HMGCL-207ENST00000498698 TMPOP42166 694 aaKnown RBP12.5□□□□□ -0.41
HMGCL-207ENST00000498698 RIPK4P57078 832 aa12.5□□□□□ -0.41
HMGCL-207ENST00000498698 SIPA1L3O60292 1781 aaPredicted RBP12.5□□□□□ -0.41
HMGCL-207ENST00000498698 CHD4Q14839 1912 aa12.49□□□□□ -0.41
HMGCL-207ENST00000498698 KIF13BQ9NQT8 1826 aa12.49□□□□□ -0.41
HMGCL-207ENST00000498698 KIAA1551Q9HCM1 1747 aa12.49□□□□□ -0.41
HMGCL-207ENST00000498698 CARMIL3Q8ND23 1372 aa12.49□□□□□ -0.41
HMGCL-207ENST00000498698 RGL2O15211 777 aa12.49□□□□□ -0.41
HMGCL-207ENST00000498698 PRR5LQ6MZQ0 368 aa12.49□□□□□ -0.41
HMGCL-207ENST00000498698 CLEC4GQ6UXB4 293 aa12.49□□□□□ -0.41
HMGCL-207ENST00000498698 SETDB2Q96T68 719 aa12.49□□□□□ -0.41
HMGCL-207ENST00000498698 BRIP1Q9BX63 1249 aa12.49□□□□□ -0.41
HMGCL-207ENST00000498698 PRKRIP1Q9H875 184 aaPredicted RBP12.49□□□□□ -0.41
HMGCL-207ENST00000498698 GPBP1L1Q9HC44 474 aaPredicted RBP12.49□□□□□ -0.41
HMGCL-207ENST00000498698 H0YIN7 160 aa12.48□□□□□ -0.41
HMGCL-207ENST00000498698 C2CD5Q86YS7 1000 aa12.48□□□□□ -0.41
HMGCL-207ENST00000498698 ZNF526Q8TF50 670 aaPredicted RBP12.48□□□□□ -0.41
HMGCL-207ENST00000498698 CCDC24Q8N4L8 307 aa12.47□□□□□ -0.41
HMGCL-207ENST00000498698 TTLL6Q8N841 843 aa12.47□□□□□ -0.41
HMGCL-207ENST00000498698 ADAMTS8Q9UP79 889 aa12.47□□□□□ -0.41
HMGCL-207ENST00000498698 PDE6BP35913 854 aa12.46□□□□□ -0.41
HMGCL-207ENST00000498698 LMOD3Q0VAK6 560 aa12.46□□□□□ -0.41
HMGCL-207ENST00000498698 WDR43Q15061 677 aaKnown RBP eCLIP12.46□□□□□ -0.41
HMGCL-207ENST00000498698 C9orf131Q5VYM1 1079 aa12.46□□□□□ -0.41
HMGCL-207ENST00000498698 CCDC146Q8IYE0 955 aa12.46□□□□□ -0.41
HMGCL-207ENST00000498698 CNBD1Q8NA66 436 aa12.46□□□□□ -0.41
HMGCL-207ENST00000498698 RUNDC1Q96C34 613 aa12.46□□□□□ -0.41
HMGCL-207ENST00000498698 BABAM1Q9NWV8 329 aa12.46□□□□□ -0.41
HMGCL-207ENST00000498698 TSPYL4Q9UJ04 414 aa12.46□□□□□ -0.41
HMGCL-207ENST00000498698 PDZRN3Q9UPQ7 1066 aa12.46□□□□□ -0.41
HMGCL-207ENST00000498698 ZNF652Q9Y2D9 606 aa12.46□□□□□ -0.41
HMGCL-207ENST00000498698 RRP7AQ9Y3A4 280 aaKnown RBP12.46□□□□□ -0.41
HMGCL-207ENST00000498698 ZEB1P37275 1124 aaPredicted RBP12.45□□□□□ -0.42
HMGCL-207ENST00000498698 HLFQ16534 295 aa12.45□□□□□ -0.42
HMGCL-207ENST00000498698 N4BP2Q86UW6 1770 aaPredicted RBP12.44□□□□□ -0.42
HMGCL-207ENST00000498698 KIF3CO14782 793 aa12.44□□□□□ -0.42
HMGCL-207ENST00000498698 NBPF5PQ86XG9 351 aaPredicted RBP12.44□□□□□ -0.42
HMGCL-207ENST00000498698 NGEFQ8N5V2 710 aa12.44□□□□□ -0.42
HMGCL-207ENST00000498698 TRIM35Q9UPQ4 493 aa12.44□□□□□ -0.42
HMGCL-207ENST00000498698 NIP7Q9Y221 180 aaKnown RBP eCLIP12.44□□□□□ -0.42
HMGCL-207ENST00000498698 NRXN2Q9P2S2 1712 aa12.44□□□□□ -0.42
HMGCL-207ENST00000498698 VIRMAQ69YN4 1812 aaKnown RBP12.44□□□□□ -0.42
HMGCL-207ENST00000498698 ERVV-1B6SEH8 477 aa12.43□□□□□ -0.42
HMGCL-207ENST00000498698 CHL1O00533 1208 aa12.43□□□□□ -0.42
HMGCL-207ENST00000498698 NPHP1O15259 732 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms