RNA–Protein interactions for RNA: ENST00000498660.1

TUBA4A-210, Transcript of tubulin alpha 4a, human

TSL 3

Gene TUBA4A, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TUBA4A-210	ENST00000498660	DDX54	Q8TDD1	881 aa	Known RBP	11.24	□□□□□ -0.61
TUBA4A-210	ENST00000498660	STK31	Q9BXU1	1019 aa		11.24	□□□□□ -0.61
TUBA4A-210	ENST00000498660	ERVV-2	B6SEH9	535 aa		11.23	□□□□□ -0.61
TUBA4A-210	ENST00000498660	TRIM27	P14373	513 aa		11.23	□□□□□ -0.61
TUBA4A-210	ENST00000498660	EIF4A1	P60842	406 aa	Known RBP	11.23	□□□□□ -0.61
TUBA4A-210	ENST00000498660	CCDC30	Q5VVM6	783 aa		11.23	□□□□□ -0.61
TUBA4A-210	ENST00000498660	DZIP1L	Q8IYY4	767 aa	Known RBP	11.23	□□□□□ -0.61
TUBA4A-210	ENST00000498660	TTC5	Q8N0Z6	440 aa		11.23	□□□□□ -0.61
TUBA4A-210	ENST00000498660	ARHGAP45	Q92619	1136 aa		11.23	□□□□□ -0.61
TUBA4A-210	ENST00000498660	PDGFD	Q9GZP0	370 aa	Predicted RBP	11.23	□□□□□ -0.61
TUBA4A-210	ENST00000498660	NOB1	Q9ULX3	412 aa	Known RBP	11.23	□□□□□ -0.61
TUBA4A-210	ENST00000498660	EXOC5	O00471	708 aa		11.22	□□□□□ -0.61
TUBA4A-210	ENST00000498660	PTPRC	P08575	1304 aa		11.22	□□□□□ -0.61
TUBA4A-210	ENST00000498660	PTGER2	P43116	358 aa		11.22	□□□□□ -0.61
TUBA4A-210	ENST00000498660	TXNRD1	Q16881	649 aa		11.22	□□□□□ -0.61
TUBA4A-210	ENST00000498660	HDGFL1	Q5TGJ6	251 aa		11.22	□□□□□ -0.61
TUBA4A-210	ENST00000498660	ZNF790	Q6PG37	636 aa		11.22	□□□□□ -0.61
TUBA4A-210	ENST00000498660	KCP	Q6ZWJ8	1503 aa		11.22	□□□□□ -0.61
TUBA4A-210	ENST00000498660	PANK1	Q8TE04	598 aa		11.22	□□□□□ -0.61
TUBA4A-210	ENST00000498660	API5	Q9BZZ5	524 aa	Known RBP	11.22	□□□□□ -0.61
TUBA4A-210	ENST00000498660	STK32B	Q9NY57	414 aa		11.22	□□□□□ -0.61
TUBA4A-210	ENST00000498660	PXDNL	A1KZ92	1463 aa		11.21	□□□□□ -0.61
TUBA4A-210	ENST00000498660	HEG1	Q9ULI3	1381 aa		11.21	□□□□□ -0.61
TUBA4A-210	ENST00000498660	ZBTB7A	O95365	584 aa		11.21	□□□□□ -0.61
TUBA4A-210	ENST00000498660	AAMP	Q13685	434 aa		11.21	□□□□□ -0.61
TUBA4A-210	ENST00000498660	MVP	Q14764	893 aa	Known RBP	11.21	□□□□□ -0.61
TUBA4A-210	ENST00000498660	SLC15A2	Q16348	729 aa		11.21	□□□□□ -0.61
TUBA4A-210	ENST00000498660	PELP1	Q8IZL8	1130 aa	Known RBP	11.21	□□□□□ -0.61
TUBA4A-210	ENST00000498660	NFATC2IP	Q8NCF5	419 aa		11.21	□□□□□ -0.61
TUBA4A-210	ENST00000498660	CCDC136	Q96JN2	1154 aa		11.21	□□□□□ -0.61
TUBA4A-210	ENST00000498660	ABCC4	O15439	1325 aa		11.2	□□□□□ -0.62
TUBA4A-210	ENST00000498660	TCERG1	O14776	1098 aa	Known RBP	11.2	□□□□□ -0.62
TUBA4A-210	ENST00000498660	CLUAP1	Q96AJ1	413 aa		11.2	□□□□□ -0.62
TUBA4A-210	ENST00000498660	TMOD3	Q9NYL9	352 aa		11.2	□□□□□ -0.62
TUBA4A-210	ENST00000498660	COG6	Q9Y2V7	657 aa		11.2	□□□□□ -0.62
TUBA4A-210	ENST00000498660	KCNQ3	O43525	872 aa		11.19	□□□□□ -0.62
TUBA4A-210	ENST00000498660	SLC4A2	P04920	1241 aa		11.19	□□□□□ -0.62
TUBA4A-210	ENST00000498660	RLBP1	P12271	317 aa		11.19	□□□□□ -0.62
TUBA4A-210	ENST00000498660	ITPRIP	Q8IWB1	547 aa		11.19	□□□□□ -0.62
TUBA4A-210	ENST00000498660	FMNL2	Q96PY5	1086 aa		11.19	□□□□□ -0.62
TUBA4A-210	ENST00000498660	DDX19B	Q9UMR2	479 aa		11.19	□□□□□ -0.62
TUBA4A-210	ENST00000498660	ATF5	Q9Y2D1	282 aa	Predicted RBP	11.19	□□□□□ -0.62
TUBA4A-210	ENST00000498660	GIGYF1	O75420	1035 aa	Predicted RBP	11.18	□□□□□ -0.62
TUBA4A-210	ENST00000498660	SLC39A6	Q13433	755 aa		11.18	□□□□□ -0.62
TUBA4A-210	ENST00000498660	B4GALNT3	Q6L9W6	998 aa		11.18	□□□□□ -0.62
TUBA4A-210	ENST00000498660	MTFR1L	Q9H019	292 aa		11.18	□□□□□ -0.62
TUBA4A-210	ENST00000498660	CHMP4B	Q9H444	224 aa	Known RBP	11.18	□□□□□ -0.62
TUBA4A-210	ENST00000498660	TNN	Q9UQP3	1299 aa		11.18	□□□□□ -0.62
TUBA4A-210	ENST00000498660	NHS	Q6T4R5	1651 aa		11.17	□□□□□ -0.62
TUBA4A-210	ENST00000498660	CIC	Q96RK0	1608 aa	Predicted RBP	11.17	□□□□□ -0.62
TUBA4A-210	ENST00000498660	SNRPA1	P09661	255 aa	Known RBP	11.17	□□□□□ -0.62
TUBA4A-210	ENST00000498660	FLII	Q13045	1269 aa		11.17	□□□□□ -0.62
TUBA4A-210	ENST00000498660	TMEM57	Q8N5G2	664 aa		11.17	□□□□□ -0.62
TUBA4A-210	ENST00000498660	NECTIN2	Q92692	538 aa		11.17	□□□□□ -0.62
TUBA4A-210	ENST00000498660	SGIP1	Q9BQI5	828 aa		11.17	□□□□□ -0.62
TUBA4A-210	ENST00000498660	SYT17	Q9BSW7	474 aa		11.17	□□□□□ -0.62
TUBA4A-210	ENST00000498660	FHDC1	Q9C0D6	1143 aa	Predicted RBP	11.17	□□□□□ -0.62
TUBA4A-210	ENST00000498660	TJP1	Q07157	1748 aa		11.16	□□□□□ -0.62
TUBA4A-210	ENST00000498660	EIF2S2	P20042	333 aa	Known RBP	11.16	□□□□□ -0.62
TUBA4A-210	ENST00000498660	ZNF496	Q96IT1	587 aa	Predicted RBP	11.16	□□□□□ -0.62
TUBA4A-210	ENST00000498660	CHPF2	Q9P2E5	772 aa		11.16	□□□□□ -0.62
TUBA4A-210	ENST00000498660	DBF4	Q9UBU7	674 aa	Predicted RBP	11.16	□□□□□ -0.62
TUBA4A-210	ENST00000498660	FKBP5	Q13451	457 aa	Predicted RBP	11.15	□□□□□ -0.62
TUBA4A-210	ENST00000498660	ZNF784	Q8NCA9	323 aa	Predicted RBP	11.15	□□□□□ -0.62
TUBA4A-210	ENST00000498660	ACSBG1	Q96GR2	724 aa		11.15	□□□□□ -0.62
TUBA4A-210	ENST00000498660	UTRN	P46939	3433 aa		11.15	□□□□□ -0.62
TUBA4A-210	ENST00000498660	ERBB4	Q15303	1308 aa		11.14	□□□□□ -0.63
TUBA4A-210	ENST00000498660	CCT4	P50991	539 aa	Known RBP	11.14	□□□□□ -0.63
TUBA4A-210	ENST00000498660	HYPK	Q9NX55	129 aa		11.14	□□□□□ -0.63
TUBA4A-210	ENST00000498660	ZNF831	Q5JPB2	1677 aa		11.14	□□□□□ -0.63
TUBA4A-210	ENST00000498660	ARFGEF2	Q9Y6D5	1785 aa		11.13	□□□□□ -0.63
TUBA4A-210	ENST00000498660	INTS3	Q68E01	1043 aa	Known RBP	11.13	□□□□□ -0.63
TUBA4A-210	ENST00000498660	G2E3	Q7L622	706 aa		11.13	□□□□□ -0.63
TUBA4A-210	ENST00000498660	PIGB	Q92521	554 aa		11.13	□□□□□ -0.63
TUBA4A-210	ENST00000498660	SYTL4	Q96C24	671 aa	Predicted RBP	11.13	□□□□□ -0.63
TUBA4A-210	ENST00000498660	ARX	Q96QS3	562 aa		11.13	□□□□□ -0.63
TUBA4A-210	ENST00000498660	DDX21	Q9NR30	783 aa	Known RBP eCLIP	11.13	□□□□□ -0.63
TUBA4A-210	ENST00000498660	KAT6B	Q8WYB5	2073 aa		11.13	□□□□□ -0.63
TUBA4A-210	ENST00000498660	BTAF1	O14981	1849 aa		11.12	□□□□□ -0.63
TUBA4A-210	ENST00000498660	ATP10D	Q9P241	1426 aa		11.12	□□□□□ -0.63
TUBA4A-210	ENST00000498660	PRAMEF22	A3QJZ6	481 aa		11.12	□□□□□ -0.63
TUBA4A-210	ENST00000498660	CENPQ	Q7L2Z9	268 aa	Predicted RBP	11.12	□□□□□ -0.63
TUBA4A-210	ENST00000498660	VSIG10	Q8N0Z9	540 aa		11.12	□□□□□ -0.63
TUBA4A-210	ENST00000498660	CHD4	Q14839	1912 aa		11.11	□□□□□ -0.63
TUBA4A-210	ENST00000498660	PTCD1	O75127	700 aa	Known RBP	11.11	□□□□□ -0.63
TUBA4A-210	ENST00000498660	DDX58	O95786	925 aa	Known RBP	11.11	□□□□□ -0.63
TUBA4A-210	ENST00000498660	PRIM1	P49642	420 aa	Known RBP	11.11	□□□□□ -0.63
TUBA4A-210	ENST00000498660	ZNF827	Q17R98	1081 aa		11.11	□□□□□ -0.63
TUBA4A-210	ENST00000498660	PHAX	Q9H814	394 aa	Known RBP	11.11	□□□□□ -0.63
TUBA4A-210	ENST00000498660	LRRC4B	Q9NT99	713 aa		11.11	□□□□□ -0.63
TUBA4A-210	ENST00000498660	KDM2B	Q8NHM5	1336 aa		11.1	□□□□□ -0.63
TUBA4A-210	ENST00000498660	COL5A3	P25940	1745 aa	Predicted RBP	11.1	□□□□□ -0.63
TUBA4A-210	ENST00000498660	AFDN	P55196	1824 aa	Known RBP	11.1	□□□□□ -0.63
TUBA4A-210	ENST00000498660	SLC4A10	Q6U841	1118 aa		11.1	□□□□□ -0.63
TUBA4A-210	ENST00000498660	SLC16A10	Q8TF71	515 aa		11.1	□□□□□ -0.63
TUBA4A-210	ENST00000498660	AKT1S1	Q96B36	256 aa		11.1	□□□□□ -0.63
TUBA4A-210	ENST00000498660	TEX13A	Q9BXU3	409 aa	Predicted RBP	11.1	□□□□□ -0.63
TUBA4A-210	ENST00000498660	ATG3	Q9NT62	314 aa		11.1	□□□□□ -0.63
TUBA4A-210	ENST00000498660	ZBTB40	Q9NUA8	1239 aa		11.1	□□□□□ -0.63
TUBA4A-210	ENST00000498660	ASAP1	Q9ULH1	1129 aa		11.1	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms