RNA–Protein interactions for RNA: ENST00000498653.5

FXN-205, Transcript of frataxin, humanhuman

TSL 1 (best) BASIC

Gene FXN, Length 856 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-205ENST00000498653 PCDHB13Q9Y5F0 798 aa8.02□□□□□ -1.13
FXN-205ENST00000498653 PIK3C2GO75747 1445 aa8.02□□□□□ -1.13
FXN-205ENST00000498653 POLR3AO14802 1390 aaPredicted RBP8.01□□□□□ -1.13
FXN-205ENST00000498653 ZBTB7CA1YPR0 619 aa8.01□□□□□ -1.13
FXN-205ENST00000498653 CTU1Q7Z7A3 348 aaKnown RBP8.01□□□□□ -1.13
FXN-205ENST00000498653 KIF12Q96FN5 646 aa8.01□□□□□ -1.13
FXN-205ENST00000498653 PHF12Q96QT6 1004 aa8.01□□□□□ -1.13
FXN-205ENST00000498653 TAF1DQ9H5J8 278 aaPredicted RBP8.01□□□□□ -1.13
FXN-205ENST00000498653 RPGRIP1LQ68CZ1 1315 aa8.01□□□□□ -1.13
FXN-205ENST00000498653 PKD1L2Q7Z442 2459 aa8□□□□□ -1.13
FXN-205ENST00000498653 NFKBIEO00221 500 aa8□□□□□ -1.13
FXN-205ENST00000498653 CIAPIN1Q6FI81 312 aa8□□□□□ -1.13
FXN-205ENST00000498653 PHF6Q8IWS0 365 aaKnown RBP eCLIP8□□□□□ -1.13
FXN-205ENST00000498653 PRAM1Q96QH2 718 aa8□□□□□ -1.13
FXN-205ENST00000498653 DDNO94850 711 aaPredicted RBP7.99□□□□□ -1.13
FXN-205ENST00000498653 PRIM1P49642 420 aaKnown RBP7.99□□□□□ -1.13
FXN-205ENST00000498653 DPY19L2Q6NUT2 758 aa7.99□□□□□ -1.13
FXN-205ENST00000498653 DDX21Q9NR30 783 aaKnown RBP eCLIP7.99□□□□□ -1.13
FXN-205ENST00000498653 RBM27Q9P2N5 1060 aaKnown RBP7.99□□□□□ -1.13
FXN-205ENST00000498653 SYNGAP1Q96PV0 1343 aa7.99□□□□□ -1.13
FXN-205ENST00000498653 NUP155O75694 1391 aa7.98□□□□□ -1.13
FXN-205ENST00000498653 FER1L6Q2WGJ9 1857 aa7.98□□□□□ -1.13
FXN-205ENST00000498653 MAP3K13O43283 966 aa7.98□□□□□ -1.13
FXN-205ENST00000498653 SSFA2P28290 1259 aa7.98□□□□□ -1.13
FXN-205ENST00000498653 FMR1Q06787 632 aaKnown RBP eCLIP7.98□□□□□ -1.13
FXN-205ENST00000498653 MAP1SQ66K74 1059 aaPredicted RBP7.98□□□□□ -1.13
FXN-205ENST00000498653 CNTROBQ8N137 903 aa7.98□□□□□ -1.13
FXN-205ENST00000498653 ABTB2Q8N961 1025 aa7.98□□□□□ -1.13
FXN-205ENST00000498653 SYTL4Q96C24 671 aaPredicted RBP7.98□□□□□ -1.13
FXN-205ENST00000498653 TLL2Q9Y6L7 1015 aa7.98□□□□□ -1.13
FXN-205ENST00000498653 MAP2P11137 1827 aaKnown RBP7.98□□□□□ -1.13
FXN-205ENST00000498653 USP47Q96K76 1375 aa7.97□□□□□ -1.13
FXN-205ENST00000498653 SOX1O00570 391 aaPredicted RBP7.97□□□□□ -1.13
FXN-205ENST00000498653 CCDC24Q8N4L8 307 aa7.97□□□□□ -1.13
FXN-205ENST00000498653 L3MBTL3Q96JM7 780 aaPredicted RBP7.97□□□□□ -1.13
FXN-205ENST00000498653 AK7Q96M32 723 aa7.97□□□□□ -1.13
FXN-205ENST00000498653 ZIC5Q96T25 663 aa7.97□□□□□ -1.13
FXN-205ENST00000498653 CCDC87Q9NVE4 849 aa7.97□□□□□ -1.13
FXN-205ENST00000498653 POTEFA5A3E0 1075 aa7.96□□□□□ -1.14
FXN-205ENST00000498653 H0YGN5 161 aa7.96□□□□□ -1.14
FXN-205ENST00000498653 CSB-PGBD3P0DP91 1061 aa7.96□□□□□ -1.14
FXN-205ENST00000498653 CHRNA5P30532 468 aa7.96□□□□□ -1.14
FXN-205ENST00000498653 PDAP1Q13442 181 aaKnown RBP7.96□□□□□ -1.14
FXN-205ENST00000498653 RNF25Q96BH1 459 aaPredicted RBP7.96□□□□□ -1.14
FXN-205ENST00000498653 KIAA0100Q14667 2235 aaKnown RBP7.96□□□□□ -1.14
FXN-205ENST00000498653 IQCA1LA6NCM1 817 aa7.95□□□□□ -1.14
FXN-205ENST00000498653 IL2RBP14784 551 aa7.95□□□□□ -1.14
FXN-205ENST00000498653 EAPPQ56P03 285 aaPredicted RBP7.95□□□□□ -1.14
FXN-205ENST00000498653 CST9Q5W186 159 aa7.95□□□□□ -1.14
FXN-205ENST00000498653 NLRP13Q86W25 1043 aa7.95□□□□□ -1.14
FXN-205ENST00000498653 LRCH3Q96II8 777 aa7.95□□□□□ -1.14
FXN-205ENST00000498653 PRO3102Q9H379 93 aa7.95□□□□□ -1.14
FXN-205ENST00000498653 STXBP5LQ9Y2K9 1186 aa7.95□□□□□ -1.14
FXN-205ENST00000498653 INSRP06213 1382 aa7.95□□□□□ -1.14
FXN-205ENST00000498653 LOC105371045A0A1W2PR82 267 aa7.94□□□□□ -1.14
FXN-205ENST00000498653 IFNL1Q8IU54 200 aa7.94□□□□□ -1.14
FXN-205ENST00000498653 SAGE1Q9NXZ1 904 aa7.94□□□□□ -1.14
FXN-205ENST00000498653 PCDHB8Q9UN66 801 aa7.94□□□□□ -1.14
FXN-205ENST00000498653 PALLDQ8WX93 1383 aa7.94□□□□□ -1.14
FXN-205ENST00000498653 AKAP11Q9UKA4 1901 aa7.93□□□□□ -1.14
FXN-205ENST00000498653 NFAT5O94916 1531 aa7.93□□□□□ -1.14
FXN-205ENST00000498653 WASLO00401 505 aaPredicted RBP7.93□□□□□ -1.14
FXN-205ENST00000498653 EVX2Q03828 476 aa7.93□□□□□ -1.14
FXN-205ENST00000498653 ACEP12821 1306 aa7.93□□□□□ -1.14
FXN-205ENST00000498653 STK25O00506 426 aa7.92□□□□□ -1.14
FXN-205ENST00000498653 PKN2Q16513 984 aaKnown RBP7.92□□□□□ -1.14
FXN-205ENST00000498653 NBPF1Q3BBV0 1214 aa7.92□□□□□ -1.14
FXN-205ENST00000498653 ERFEQ4G0M1 354 aa7.92□□□□□ -1.14
FXN-205ENST00000498653 SAPCD2Q86UD0 394 aa7.92□□□□□ -1.14
FXN-205ENST00000498653 ARHGEF25Q86VW2 580 aa7.92□□□□□ -1.14
FXN-205ENST00000498653 MS4A3Q96HJ5 214 aa7.92□□□□□ -1.14
FXN-205ENST00000498653 PSEN1P49768 467 aa7.91□□□□□ -1.14
FXN-205ENST00000498653 KANK4Q5T7N3 995 aaPredicted RBP7.91□□□□□ -1.14
FXN-205ENST00000498653 HS6ST3Q8IZP7 471 aa7.91□□□□□ -1.14
FXN-205ENST00000498653 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.9□□□□□ -1.14
FXN-205ENST00000498653 EPHX2P34913 555 aa7.9□□□□□ -1.14
FXN-205ENST00000498653 DDX54Q8TDD1 881 aaKnown RBP7.9□□□□□ -1.14
FXN-205ENST00000498653 HHIPL1Q96JK4 782 aa7.9□□□□□ -1.14
FXN-205ENST00000498653 ZFP91Q96JP5 570 aaPredicted RBP7.9□□□□□ -1.14
FXN-205ENST00000498653 TRAF5O00463 557 aa7.89□□□□□ -1.15
FXN-205ENST00000498653 MAP3K12Q12852 859 aa7.89□□□□□ -1.15
FXN-205ENST00000498653 LINC00116Q8NCU8 138 aa7.89□□□□□ -1.15
FXN-205ENST00000498653 NUDT16Q96DE0 195 aaKnown RBP7.89□□□□□ -1.15
FXN-205ENST00000498653 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.89□□□□□ -1.15
FXN-205ENST00000498653 ADGRB1O14514 1584 aa7.88□□□□□ -1.15
FXN-205ENST00000498653 ITGB4P16144 1822 aa7.88□□□□□ -1.15
FXN-205ENST00000498653 NOGQ13253 232 aa7.88□□□□□ -1.15
FXN-205ENST00000498653 AKAP4Q5JQC9 854 aa7.88□□□□□ -1.15
FXN-205ENST00000498653 FBXO46Q6PJ61 603 aaPredicted RBP7.88□□□□□ -1.15
FXN-205ENST00000498653 Q7L0L9 218 aa7.88□□□□□ -1.15
FXN-205ENST00000498653 NLGN1Q8N2Q7 840 aa7.88□□□□□ -1.15
FXN-205ENST00000498653 RNF186Q9NXI6 227 aa7.88□□□□□ -1.15
FXN-205ENST00000498653 POGKQ9P215 609 aa7.88□□□□□ -1.15
FXN-205ENST00000498653 HACL1Q9UJ83 578 aa7.88□□□□□ -1.15
FXN-205ENST00000498653 STK24Q9Y6E0 443 aa7.88□□□□□ -1.15
FXN-205ENST00000498653 PARP3Q9Y6F1 533 aa7.88□□□□□ -1.15
FXN-205ENST00000498653 FAM208AQ9UK61 1670 aaKnown RBP7.88□□□□□ -1.15
FXN-205ENST00000498653 NRXN2Q9P2S2 1712 aa7.87□□□□□ -1.15
FXN-205ENST00000498653 TMEM265A0A087WTH1 108 aa7.87□□□□□ -1.15
FXN-205ENST00000498653 PPEF1O14829 653 aaPredicted RBP7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms