RNA–Protein interactions for RNA: ENST00000498645.1

LSAMP-206, Transcript of limbic system associated membrane protein, humanhuman

TSL 3

Gene LSAMP, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-206ENST00000498645 ZBTB1Q9Y2K1 713 aa14.83□□□□□ -0.04
LSAMP-206ENST00000498645 CEP350Q5VT06 3117 aa14.83□□□□□ -0.04
LSAMP-206ENST00000498645 SIPA1L3O60292 1781 aaPredicted RBP14.83□□□□□ -0.04
LSAMP-206ENST00000498645 AFDNP55196 1824 aaKnown RBP14.82□□□□□ -0.04
LSAMP-206ENST00000498645 CANXP27824 592 aaKnown RBP14.82□□□□□ -0.04
LSAMP-206ENST00000498645 POLRMTO00411 1230 aaKnown RBP14.81□□□□□ -0.04
LSAMP-206ENST00000498645 CHRNA5P30532 468 aa14.81□□□□□ -0.04
LSAMP-206ENST00000498645 PRKAR2BP31323 418 aa14.81□□□□□ -0.04
LSAMP-206ENST00000498645 PIM2Q9P1W9 311 aa14.81□□□□□ -0.04
LSAMP-206ENST00000498645 ZNF330Q9Y3S2 320 aaPredicted RBP14.81□□□□□ -0.04
LSAMP-206ENST00000498645 KCNA3P22001 575 aa14.8□□□□□ -0.04
LSAMP-206ENST00000498645 VSIG10Q8N0Z9 540 aa14.8□□□□□ -0.04
LSAMP-206ENST00000498645 IL17REQ8NFR9 667 aa14.8□□□□□ -0.04
LSAMP-206ENST00000498645 NARFQ9UHQ1 456 aa14.8□□□□□ -0.04
LSAMP-206ENST00000498645 STARD3NLO95772 234 aa14.79□□□□□ -0.04
LSAMP-206ENST00000498645 TM4SF1P30408 202 aa14.79□□□□□ -0.04
LSAMP-206ENST00000498645 NFIXQ14938 502 aa14.79□□□□□ -0.04
LSAMP-206ENST00000498645 DALRD3Q5D0E6 543 aaKnown RBP14.79□□□□□ -0.04
LSAMP-206ENST00000498645 ZNF496Q96IT1 587 aaPredicted RBP14.79□□□□□ -0.04
LSAMP-206ENST00000498645 PHACTR3Q96KR7 559 aa14.79□□□□□ -0.04
LSAMP-206ENST00000498645 NUDCQ9Y266 331 aa14.79□□□□□ -0.04
LSAMP-206ENST00000498645 U2AF1L5P0DN76 240 aaPredicted RBP14.78□□□□□ -0.04
LSAMP-206ENST00000498645 U2AF1Q01081 240 aaKnown RBP eCLIP14.78□□□□□ -0.04
LSAMP-206ENST00000498645 ZNF790Q6PG37 636 aa14.78□□□□□ -0.04
LSAMP-206ENST00000498645 BICDL1Q6ZP65 573 aa14.78□□□□□ -0.04
LSAMP-206ENST00000498645 RSPH6AQ9H0K4 717 aa14.78□□□□□ -0.04
LSAMP-206ENST00000498645 HEG1Q9ULI3 1381 aa14.77□□□□□ -0.04
LSAMP-206ENST00000498645 PPP2R1AP30153 589 aa14.77□□□□□ -0.05
LSAMP-206ENST00000498645 NRXN2Q9P2S2 1712 aa14.77□□□□□ -0.05
LSAMP-206ENST00000498645 SCN7AQ01118 1682 aa14.77□□□□□ -0.05
LSAMP-206ENST00000498645 SERPINB2P05120 415 aa14.76□□□□□ -0.05
LSAMP-206ENST00000498645 C9orf131Q5VYM1 1079 aa14.76□□□□□ -0.05
LSAMP-206ENST00000498645 FMNL2Q96PY5 1086 aa14.76□□□□□ -0.05
LSAMP-206ENST00000498645 BCL2L12Q9HB09 334 aa14.76□□□□□ -0.05
LSAMP-206ENST00000498645 DLEC1Q9Y238 1755 aa14.75□□□□□ -0.05
LSAMP-206ENST00000498645 CEMIPQ8WUJ3 1361 aa14.75□□□□□ -0.05
LSAMP-206ENST00000498645 A0A087WZG4 1122 aa14.75□□□□□ -0.05
LSAMP-206ENST00000498645 BTBD11A6QL63 1104 aa14.75□□□□□ -0.05
LSAMP-206ENST00000498645 KIF3CO14782 793 aa14.75□□□□□ -0.05
LSAMP-206ENST00000498645 KCNQ3O43525 872 aa14.75□□□□□ -0.05
LSAMP-206ENST00000498645 EIF5P55010 431 aaKnown RBP14.74□□□□□ -0.05
LSAMP-206ENST00000498645 MCM10Q7L590 875 aa14.74□□□□□ -0.05
LSAMP-206ENST00000498645 NPM2Q86SE8 214 aaKnown RBP14.74□□□□□ -0.05
LSAMP-206ENST00000498645 RTF1Q92541 710 aaKnown RBP14.74□□□□□ -0.05
LSAMP-206ENST00000498645 TEX13AQ9BXU3 409 aaPredicted RBP14.74□□□□□ -0.05
LSAMP-206ENST00000498645 RNF181Q9P0P0 153 aa14.74□□□□□ -0.05
LSAMP-206ENST00000498645 TBC1D2BQ9UPU7 963 aa14.74□□□□□ -0.05
LSAMP-206ENST00000498645 SBF1O95248 1867 aa14.74□□□□□ -0.05
LSAMP-206ENST00000498645 CARMIL3Q8ND23 1372 aa14.73□□□□□ -0.05
LSAMP-206ENST00000498645 NMRK2Q9NPI5 230 aa14.73□□□□□ -0.05
LSAMP-206ENST00000498645 ANKRD31Q8N7Z5 1873 aa14.72□□□□□ -0.05
LSAMP-206ENST00000498645 A1BGP04217 495 aa14.72□□□□□ -0.05
LSAMP-206ENST00000498645 HSPA6P17066 643 aa14.72□□□□□ -0.05
LSAMP-206ENST00000498645 PIP4K2AP48426 406 aaPredicted RBP14.72□□□□□ -0.05
LSAMP-206ENST00000498645 TBC1D9BQ66K14 1250 aa14.72□□□□□ -0.05
LSAMP-206ENST00000498645 C2CD5Q86YS7 1000 aa14.72□□□□□ -0.05
LSAMP-206ENST00000498645 BCORQ6W2J9 1755 aa14.71□□□□□ -0.05
LSAMP-206ENST00000498645 NPHP1O15259 732 aa14.71□□□□□ -0.05
LSAMP-206ENST00000498645 IL6STP40189 918 aaPredicted RBP14.71□□□□□ -0.05
LSAMP-206ENST00000498645 RASSF7Q02833 373 aa14.71□□□□□ -0.05
LSAMP-206ENST00000498645 DCTN1Q14203 1278 aa14.71□□□□□ -0.05
LSAMP-206ENST00000498645 CCDC24Q8N4L8 307 aa14.71□□□□□ -0.05
LSAMP-206ENST00000498645 CACNA1SQ13698 1873 aa14.71□□□□□ -0.05
LSAMP-206ENST00000498645 DLG5Q8TDM6 1919 aa14.7□□□□□ -0.06
LSAMP-206ENST00000498645 CCDC88AQ3V6T2 1871 aa14.7□□□□□ -0.06
LSAMP-206ENST00000498645 COL11A2P13942 1736 aaPredicted RBP14.7□□□□□ -0.06
LSAMP-206ENST00000498645 PRAMEF22A3QJZ6 481 aa14.7□□□□□ -0.06
LSAMP-206ENST00000498645 H0YIN7 160 aa14.7□□□□□ -0.06
LSAMP-206ENST00000498645 DZIP3Q86Y13 1208 aaKnown RBP14.69□□□□□ -0.06
LSAMP-206ENST00000498645 TTLL6Q8N841 843 aa14.69□□□□□ -0.06
LSAMP-206ENST00000498645 USP16Q9Y5T5 823 aa14.69□□□□□ -0.06
LSAMP-206ENST00000498645 TIAM2Q8IVF5 1701 aa14.69□□□□□ -0.06
LSAMP-206ENST00000498645 NEFMP07197 916 aa14.68□□□□□ -0.06
LSAMP-206ENST00000498645 C16orf71Q8IYS4 520 aaPredicted RBP14.68□□□□□ -0.06
LSAMP-206ENST00000498645 ZNF622Q969S3 477 aaKnown RBP eCLIP14.68□□□□□ -0.06
LSAMP-206ENST00000498645 ZNF219Q9P2Y4 722 aaPredicted RBP14.68□□□□□ -0.06
LSAMP-206ENST00000498645 TNRC6CQ9HCJ0 1690 aaKnown RBP14.68□□□□□ -0.06
LSAMP-206ENST00000498645 KDM2BQ8NHM5 1336 aa14.67□□□□□ -0.06
LSAMP-206ENST00000498645 TOMM70O94826 608 aa14.67□□□□□ -0.06
LSAMP-206ENST00000498645 CAMTA2O94983 1202 aa14.67□□□□□ -0.06
LSAMP-206ENST00000498645 PRR5LQ6MZQ0 368 aa14.67□□□□□ -0.06
LSAMP-206ENST00000498645 SETDB2Q96T68 719 aa14.67□□□□□ -0.06
LSAMP-206ENST00000498645 LAMB4A4D0S4 1761 aa14.66□□□□□ -0.06
LSAMP-206ENST00000498645 SNRPA1P09661 255 aaKnown RBP14.66□□□□□ -0.06
LSAMP-206ENST00000498645 PDE6BP35913 854 aa14.66□□□□□ -0.06
LSAMP-206ENST00000498645 CNBD1Q8NA66 436 aa14.66□□□□□ -0.06
LSAMP-206ENST00000498645 MIS18AQ9NYP9 233 aa14.66□□□□□ -0.06
LSAMP-206ENST00000498645 LMNB1P20700 586 aa14.65□□□□□ -0.06
LSAMP-206ENST00000498645 ST5P78524 1137 aa14.65□□□□□ -0.06
LSAMP-206ENST00000498645 BRIP1Q9BX63 1249 aa14.65□□□□□ -0.06
LSAMP-206ENST00000498645 HTATSF1O43719 755 aaKnown RBP14.64□□□□□ -0.07
LSAMP-206ENST00000498645 C21orf2O43822 256 aa14.64□□□□□ -0.07
LSAMP-206ENST00000498645 TAF7Q15545 349 aaPredicted RBP14.64□□□□□ -0.07
LSAMP-206ENST00000498645 RRAGCQ9HB90 399 aa14.64□□□□□ -0.07
LSAMP-206ENST00000498645 KDM3BQ7LBC6 1761 aa14.64□□□□□ -0.07
LSAMP-206ENST00000498645 APLP1P51693 650 aa14.63□□□□□ -0.07
LSAMP-206ENST00000498645 PRELPP51888 382 aa14.63□□□□□ -0.07
LSAMP-206ENST00000498645 NBPF5PQ86XG9 351 aaPredicted RBP14.63□□□□□ -0.07
LSAMP-206ENST00000498645 ZNF652Q9Y2D9 606 aa14.63□□□□□ -0.07
LSAMP-206ENST00000498645 SLX4Q8IY92 1834 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms