RNA–Protein interactions for RNA: ENST00000498628.6

CDKN2A-209, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 2 BASIC

Gene CDKN2A, Length 926 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-209ENST00000498628 ZNF496Q96IT1 587 aaPredicted RBP22.57■■□□□ 1.2
CDKN2A-209ENST00000498628 COL15A1P39059 1388 aa22.57■■□□□ 1.2
CDKN2A-209ENST00000498628 CEMIPQ8WUJ3 1361 aa22.57■■□□□ 1.2
CDKN2A-209ENST00000498628 HEG1Q9ULI3 1381 aa22.57■■□□□ 1.2
CDKN2A-209ENST00000498628 C10orf71Q711Q0 1435 aa22.57■■□□□ 1.2
CDKN2A-209ENST00000498628 A0A0G2JLW4 131 aa22.56■■□□□ 1.2
CDKN2A-209ENST00000498628 TM4SF1P30408 202 aa22.55■■□□□ 1.2
CDKN2A-209ENST00000498628 BCS1LQ9Y276 419 aa22.55■■□□□ 1.2
CDKN2A-209ENST00000498628 PXDNLA1KZ92 1463 aa22.54■■□□□ 1.2
CDKN2A-209ENST00000498628 DPEP1P16444 411 aa22.54■■□□□ 1.2
CDKN2A-209ENST00000498628 UTRNP46939 3433 aa22.54■■□□□ 1.2
CDKN2A-209ENST00000498628 GIGYF1O75420 1035 aaPredicted RBP22.53■■□□□ 1.2
CDKN2A-209ENST00000498628 RALBP1Q15311 655 aa22.53■■□□□ 1.2
CDKN2A-209ENST00000498628 PIM2Q9P1W9 311 aa22.53■■□□□ 1.2
CDKN2A-209ENST00000498628 KIF13BQ9NQT8 1826 aa22.52■■□□□ 1.2
CDKN2A-209ENST00000498628 POLRMTO00411 1230 aaKnown RBP22.52■■□□□ 1.2
CDKN2A-209ENST00000498628 EIF5P55010 431 aaKnown RBP22.52■■□□□ 1.2
CDKN2A-209ENST00000498628 DDR1Q08345 913 aa22.52■■□□□ 1.2
CDKN2A-209ENST00000498628 UBR2Q8IWV8 1755 aa22.52■■□□□ 1.2
CDKN2A-209ENST00000498628 IL6STP40189 918 aaPredicted RBP22.51■■□□□ 1.19
CDKN2A-209ENST00000498628 MCM10Q7L590 875 aa22.51■■□□□ 1.19
CDKN2A-209ENST00000498628 ZNF330Q9Y3S2 320 aaPredicted RBP22.5■■□□□ 1.19
CDKN2A-209ENST00000498628 NFIXQ14938 502 aa22.49■■□□□ 1.19
CDKN2A-209ENST00000498628 ARHGAP27Q6ZUM4 889 aa22.49■■□□□ 1.19
CDKN2A-209ENST00000498628 SERPINB2P05120 415 aa22.48■■□□□ 1.19
CDKN2A-209ENST00000498628 SNRPA1P09661 255 aaKnown RBP22.48■■□□□ 1.19
CDKN2A-209ENST00000498628 C1QTNF8P60827 252 aa22.48■■□□□ 1.19
CDKN2A-209ENST00000498628 TAF7Q15545 349 aaPredicted RBP22.48■■□□□ 1.19
CDKN2A-209ENST00000498628 DALRD3Q5D0E6 543 aaKnown RBP22.48■■□□□ 1.19
CDKN2A-209ENST00000498628 PNISRQ8TF01 805 aaKnown RBP22.48■■□□□ 1.19
CDKN2A-209ENST00000498628 GPBP1L1Q9HC44 474 aaPredicted RBP22.48■■□□□ 1.19
CDKN2A-209ENST00000498628 MAPK8IP3Q9UPT6 1336 aa22.48■■□□□ 1.19
CDKN2A-209ENST00000498628 SIPA1L3O60292 1781 aaPredicted RBP22.48■■□□□ 1.19
CDKN2A-209ENST00000498628 ATP10DQ9P241 1426 aa22.48■■□□□ 1.19
CDKN2A-209ENST00000498628 KCNQ3O43525 872 aa22.47■■□□□ 1.19
CDKN2A-209ENST00000498628 A1BGP04217 495 aa22.46■■□□□ 1.19
CDKN2A-209ENST00000498628 DCTN1Q14203 1278 aa22.46■■□□□ 1.19
CDKN2A-209ENST00000498628 N4BP2Q86UW6 1770 aaPredicted RBP22.45■■□□□ 1.19
CDKN2A-209ENST00000498628 KCNA3P22001 575 aa22.45■■□□□ 1.18
CDKN2A-209ENST00000498628 DDX10Q13206 875 aaKnown RBP22.45■■□□□ 1.18
CDKN2A-209ENST00000498628 BCL2L12Q9HB09 334 aa22.45■■□□□ 1.18
CDKN2A-209ENST00000498628 BICDL1Q6ZP65 573 aa22.44■■□□□ 1.18
CDKN2A-209ENST00000498628 TBC1D2BQ9UPU7 963 aa22.44■■□□□ 1.18
CDKN2A-209ENST00000498628 GOLGB1Q14789 3259 aaKnown RBP22.44■■□□□ 1.18
CDKN2A-209ENST00000498628 NFE2L2Q16236 605 aa22.43■■□□□ 1.18
CDKN2A-209ENST00000498628 PDZRN3Q9UPQ7 1066 aa22.43■■□□□ 1.18
CDKN2A-209ENST00000498628 USP16Q9Y5T5 823 aa22.43■■□□□ 1.18
CDKN2A-209ENST00000498628 CHRNA5P30532 468 aa22.42■■□□□ 1.18
CDKN2A-209ENST00000498628 PLEKHF1Q96S99 279 aa22.42■■□□□ 1.18
CDKN2A-209ENST00000498628 KIAA1551Q9HCM1 1747 aa22.42■■□□□ 1.18
CDKN2A-209ENST00000498628 ADCY9O60503 1353 aa22.41■■□□□ 1.18
CDKN2A-209ENST00000498628 NPHP1O15259 732 aa22.41■■□□□ 1.18
CDKN2A-209ENST00000498628 DZIP3Q86Y13 1208 aaKnown RBP22.41■■□□□ 1.18
CDKN2A-209ENST00000498628 ZNF526Q8TF50 670 aaPredicted RBP22.41■■□□□ 1.18
CDKN2A-209ENST00000498628 SETDB2Q96T68 719 aa22.41■■□□□ 1.18
CDKN2A-209ENST00000498628 H0YIN7 160 aa22.4■■□□□ 1.18
CDKN2A-209ENST00000498628 TBC1D9BQ66K14 1250 aa22.4■■□□□ 1.18
CDKN2A-209ENST00000498628 ZNF652Q9Y2D9 606 aa22.4■■□□□ 1.18
CDKN2A-209ENST00000498628 CARMIL3Q8ND23 1372 aa22.38■■□□□ 1.17
CDKN2A-209ENST00000498628 MYBBP1AQ9BQG0 1328 aaKnown RBP22.38■■□□□ 1.17
CDKN2A-209ENST00000498628 PDE6BP35913 854 aa22.38■■□□□ 1.17
CDKN2A-209ENST00000498628 CLEC4GQ6UXB4 293 aa22.38■■□□□ 1.17
CDKN2A-209ENST00000498628 C2CD5Q86YS7 1000 aa22.38■■□□□ 1.17
CDKN2A-209ENST00000498628 SENP3-EIF4A1A0A087X0R7 540 aa22.37■■□□□ 1.17
CDKN2A-209ENST00000498628 CAMTA2O94983 1202 aa22.37■■□□□ 1.17
CDKN2A-209ENST00000498628 TTLL6Q8N841 843 aa22.37■■□□□ 1.17
CDKN2A-209ENST00000498628 BRIP1Q9BX63 1249 aa22.37■■□□□ 1.17
CDKN2A-209ENST00000498628 MIS18AQ9NYP9 233 aa22.37■■□□□ 1.17
CDKN2A-209ENST00000498628 PRAMEF22A3QJZ6 481 aa22.36■■□□□ 1.17
CDKN2A-209ENST00000498628 LMOD3Q0VAK6 560 aa22.36■■□□□ 1.17
CDKN2A-209ENST00000498628 RGL2O15211 777 aa22.35■■□□□ 1.17
CDKN2A-209ENST00000498628 ST5P78524 1137 aa22.35■■□□□ 1.17
CDKN2A-209ENST00000498628 BRCA1P38398 1863 aaKnown RBP22.34■■□□□ 1.17
CDKN2A-209ENST00000498628 RIPK4P57078 832 aa22.34■■□□□ 1.17
CDKN2A-209ENST00000498628 C9orf131Q5VYM1 1079 aa22.34■■□□□ 1.17
CDKN2A-209ENST00000498628 CNBD1Q8NA66 436 aa22.34■■□□□ 1.17
CDKN2A-209ENST00000498628 NRXN2Q9P2S2 1712 aa22.34■■□□□ 1.17
CDKN2A-209ENST00000498628 AFDNP55196 1824 aaKnown RBP22.34■■□□□ 1.17
CDKN2A-209ENST00000498628 ARFGEF1Q9Y6D6 1849 aa22.34■■□□□ 1.17
CDKN2A-209ENST00000498628 PIP4K2AP48426 406 aaPredicted RBP22.33■■□□□ 1.17
CDKN2A-209ENST00000498628 WDR43Q15061 677 aaKnown RBP eCLIP22.33■■□□□ 1.17
CDKN2A-209ENST00000498628 PRR5LQ6MZQ0 368 aa22.33■■□□□ 1.17
CDKN2A-209ENST00000498628 ZNF622Q969S3 477 aaKnown RBP eCLIP22.32■■□□□ 1.16
CDKN2A-209ENST00000498628 SCN7AQ01118 1682 aa22.32■■□□□ 1.16
CDKN2A-209ENST00000498628 EIF4A1P60842 406 aaKnown RBP22.31■■□□□ 1.16
CDKN2A-209ENST00000498628 NBPF5PQ86XG9 351 aaPredicted RBP22.31■■□□□ 1.16
CDKN2A-209ENST00000498628 BABAM1Q9NWV8 329 aa22.31■■□□□ 1.16
CDKN2A-209ENST00000498628 NBPF26B4DH59 902 aa22.3■■□□□ 1.16
CDKN2A-209ENST00000498628 NBPF10Q6P3W6 841 aaKnown RBP22.3■■□□□ 1.16
CDKN2A-209ENST00000498628 TPTE2Q6XPS3 522 aa22.3■■□□□ 1.16
CDKN2A-209ENST00000498628 NBPF15Q8N660 670 aa22.3■■□□□ 1.16
CDKN2A-209ENST00000498628 THUMPD2Q9BTF0 503 aaKnown RBP22.3■■□□□ 1.16
CDKN2A-209ENST00000498628 RNF181Q9P0P0 153 aa22.3■■□□□ 1.16
CDKN2A-209ENST00000498628 TSPYL4Q9UJ04 414 aa22.3■■□□□ 1.16
CDKN2A-209ENST00000498628 DLG5Q8TDM6 1919 aa22.29■■□□□ 1.16
CDKN2A-209ENST00000498628 TMPOP42166 694 aaKnown RBP22.28■■□□□ 1.16
CDKN2A-209ENST00000498628 CNKSR1Q969H4 720 aa22.28■■□□□ 1.16
CDKN2A-209ENST00000498628 NIP7Q9Y221 180 aaKnown RBP eCLIP22.28■■□□□ 1.16
CDKN2A-209ENST00000498628 KDM2BQ8NHM5 1336 aa22.28■■□□□ 1.16
CDKN2A-209ENST00000498628 ZEB1P37275 1124 aaPredicted RBP22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms