RNA–Protein interactions for RNA: ENST00000498614.5

COL6A1-206, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL6A1, Length 2,358 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-206ENST00000498614 LTN1O94822 1766 aa20.01■□□□□ 0.79
COL6A1-206ENST00000498614 PRIM1P49642 420 aaKnown RBP20■□□□□ 0.79
COL6A1-206ENST00000498614 ZC3H6P61129 1189 aaKnown RBP20■□□□□ 0.79
COL6A1-206ENST00000498614 ST18O60284 1047 aa20■□□□□ 0.79
COL6A1-206ENST00000498614 SPATA31A3Q5VYP0 1347 aa20■□□□□ 0.79
COL6A1-206ENST00000498614 PNMA6EA0A0J9YXQ4 647 aa19.99■□□□□ 0.79
COL6A1-206ENST00000498614 PDE1AP54750 535 aa19.99■□□□□ 0.79
COL6A1-206ENST00000498614 TSHZ3Q63HK5 1081 aa19.99■□□□□ 0.79
COL6A1-206ENST00000498614 UBAP1LF5GYI3 381 aa19.99■□□□□ 0.79
COL6A1-206ENST00000498614 SOS2Q07890 1332 aaPredicted RBP19.99■□□□□ 0.79
COL6A1-206ENST00000498614 GNAI3P08754 354 aa19.98■□□□□ 0.79
COL6A1-206ENST00000498614 PDLIM2Q96JY6 352 aa19.97■□□□□ 0.79
COL6A1-206ENST00000498614 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.97■□□□□ 0.79
COL6A1-206ENST00000498614 ZMYND15Q9H091 742 aa19.97■□□□□ 0.79
COL6A1-206ENST00000498614 OSBPL3Q9H4L5 887 aa19.97■□□□□ 0.79
COL6A1-206ENST00000498614 LRRFIP2Q9Y608 721 aaKnown RBP19.97■□□□□ 0.79
COL6A1-206ENST00000498614 TOM1O60784 492 aa19.96■□□□□ 0.79
COL6A1-206ENST00000498614 HS1BP3Q53T59 392 aa19.96■□□□□ 0.79
COL6A1-206ENST00000498614 HDGFL1Q5TGJ6 251 aa19.96■□□□□ 0.79
COL6A1-206ENST00000498614 LRRCC1Q9C099 1032 aa19.96■□□□□ 0.79
COL6A1-206ENST00000498614 PHAXQ9H814 394 aaKnown RBP19.96■□□□□ 0.79
COL6A1-206ENST00000498614 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.96■□□□□ 0.79
COL6A1-206ENST00000498614 TNS3Q68CZ2 1445 aa19.96■□□□□ 0.79
COL6A1-206ENST00000498614 NBPF6Q5VWK0 638 aa19.95■□□□□ 0.78
COL6A1-206ENST00000498614 IP6K1Q92551 441 aa19.95■□□□□ 0.78
COL6A1-206ENST00000498614 NBPF4Q96M43 638 aa19.95■□□□□ 0.78
COL6A1-206ENST00000498614 ROBO1Q9Y6N7 1651 aa19.95■□□□□ 0.78
COL6A1-206ENST00000498614 REC8O95072 547 aa19.95■□□□□ 0.78
COL6A1-206ENST00000498614 ATP8B2P98198 1209 aa19.95■□□□□ 0.78
COL6A1-206ENST00000498614 TMEM63CQ9P1W3 806 aa19.95■□□□□ 0.78
COL6A1-206ENST00000498614 NOL7Q9UMY1 257 aaKnown RBP19.95■□□□□ 0.78
COL6A1-206ENST00000498614 NSFL1CQ9UNZ2 370 aaKnown RBP19.95■□□□□ 0.78
COL6A1-206ENST00000498614 CACNA1FO60840 1977 aa19.95■□□□□ 0.78
COL6A1-206ENST00000498614 ERC2O15083 957 aa19.94■□□□□ 0.78
COL6A1-206ENST00000498614 FOXD4L5Q5VV16 416 aaPredicted RBP19.94■□□□□ 0.78
COL6A1-206ENST00000498614 KCNH5Q8NCM2 988 aa19.94■□□□□ 0.78
COL6A1-206ENST00000498614 FOXD4L4Q8WXT5 416 aaPredicted RBP19.94■□□□□ 0.78
COL6A1-206ENST00000498614 ALS2Q96Q42 1657 aa19.94■□□□□ 0.78
COL6A1-206ENST00000498614 BABAM1Q9NWV8 329 aa19.94■□□□□ 0.78
COL6A1-206ENST00000498614 EIF2S2P20042 333 aaKnown RBP19.93■□□□□ 0.78
COL6A1-206ENST00000498614 PKNOX2Q96KN3 472 aa19.93■□□□□ 0.78
COL6A1-206ENST00000498614 LGR6Q9HBX8 967 aa19.93■□□□□ 0.78
COL6A1-206ENST00000498614 SOS1Q07889 1333 aaPredicted RBP19.93■□□□□ 0.78
COL6A1-206ENST00000498614 SALL3Q9BXA9 1300 aa19.93■□□□□ 0.78
COL6A1-206ENST00000498614 NFAT5O94916 1531 aa19.93■□□□□ 0.78
COL6A1-206ENST00000498614 CERKQ8TCT0 537 aa19.93■□□□□ 0.78
COL6A1-206ENST00000498614 USP44Q9H0E7 712 aa19.93■□□□□ 0.78
COL6A1-206ENST00000498614 PDCL3Q9H2J4 239 aa19.93■□□□□ 0.78
COL6A1-206ENST00000498614 MED1Q15648 1581 aaPredicted RBP19.93■□□□□ 0.78
COL6A1-206ENST00000498614 CHRNA2Q15822 529 aa19.92■□□□□ 0.78
COL6A1-206ENST00000498614 AXIN2Q9Y2T1 843 aa19.92■□□□□ 0.78
COL6A1-206ENST00000498614 SYCE3A1L190 88 aa19.92■□□□□ 0.78
COL6A1-206ENST00000498614 UBTFL1P0CB47 393 aaPredicted RBP19.92■□□□□ 0.78
COL6A1-206ENST00000498614 MX1P20591 662 aa19.92■□□□□ 0.78
COL6A1-206ENST00000498614 ARHGEF25Q86VW2 580 aa19.92■□□□□ 0.78
COL6A1-206ENST00000498614 R3HCC1Q9Y3T6 440 aaKnown RBP19.92■□□□□ 0.78
COL6A1-206ENST00000498614 RGPD2P0DJD1 1756 aa19.91■□□□□ 0.78
COL6A1-206ENST00000498614 N4BP2Q86UW6 1770 aaPredicted RBP19.91■□□□□ 0.78
COL6A1-206ENST00000498614 CEMIPQ8WUJ3 1361 aa19.91■□□□□ 0.78
COL6A1-206ENST00000498614 ZNF500O60304 480 aaPredicted RBP19.91■□□□□ 0.78
COL6A1-206ENST00000498614 LRSAM1Q6UWE0 723 aa19.91■□□□□ 0.78
COL6A1-206ENST00000498614 LRRC59Q96AG4 307 aaKnown RBP19.91■□□□□ 0.78
COL6A1-206ENST00000498614 PXDNLA1KZ92 1463 aa19.9■□□□□ 0.78
COL6A1-206ENST00000498614 NEK4P51957 841 aa19.9■□□□□ 0.78
COL6A1-206ENST00000498614 TERF1P54274 439 aa19.9■□□□□ 0.78
COL6A1-206ENST00000498614 TMX3Q96JJ7 454 aa19.9■□□□□ 0.78
COL6A1-206ENST00000498614 TUBGCP6Q96RT7 1819 aa19.89■□□□□ 0.78
COL6A1-206ENST00000498614 KCNQ3O43525 872 aa19.89■□□□□ 0.77
COL6A1-206ENST00000498614 EIF4A1P60842 406 aaKnown RBP19.89■□□□□ 0.77
COL6A1-206ENST00000498614 RBM10P98175 930 aaKnown RBP19.89■□□□□ 0.77
COL6A1-206ENST00000498614 RILPL2Q969X0 211 aa19.89■□□□□ 0.77
COL6A1-206ENST00000498614 TRIM6-TRIM34B2RNG4 842 aa19.88■□□□□ 0.77
COL6A1-206ENST00000498614 IL1RAPL2Q9NP60 686 aa19.88■□□□□ 0.77
COL6A1-206ENST00000498614 CHPF2Q9P2E5 772 aa19.88■□□□□ 0.77
COL6A1-206ENST00000498614 ZKSCAN5Q9Y2L8 839 aa19.88■□□□□ 0.77
COL6A1-206ENST00000498614 NHSL1Q5SYE7 1610 aa19.88■□□□□ 0.77
COL6A1-206ENST00000498614 SLIT3O75094 1523 aa19.87■□□□□ 0.77
COL6A1-206ENST00000498614 ZNF530Q6P9A1 599 aaPredicted RBP19.87■□□□□ 0.77
COL6A1-206ENST00000498614 ESYT1Q9BSJ8 1104 aa19.87■□□□□ 0.77
COL6A1-206ENST00000498614 SRCIN1Q9C0H9 1055 aa19.87■□□□□ 0.77
COL6A1-206ENST00000498614 ANXA1P04083 346 aa19.86■□□□□ 0.77
COL6A1-206ENST00000498614 MPRIPQ6WCQ1 1025 aa19.86■□□□□ 0.77
COL6A1-206ENST00000498614 RNF214Q8ND24 703 aa19.86■□□□□ 0.77
COL6A1-206ENST00000498614 KDM3BQ7LBC6 1761 aa19.86■□□□□ 0.77
COL6A1-206ENST00000498614 BRD1O95696 1058 aa19.85■□□□□ 0.77
COL6A1-206ENST00000498614 TEFQ10587 303 aa19.85■□□□□ 0.77
COL6A1-206ENST00000498614 PPP1R42Q7Z4L9 355 aa19.85■□□□□ 0.77
COL6A1-206ENST00000498614 UNC5CLQ8IV45 518 aa19.85■□□□□ 0.77
COL6A1-206ENST00000498614 SSH3Q8TE77 659 aa19.85■□□□□ 0.77
COL6A1-206ENST00000498614 PALD1Q9ULE6 856 aa19.85■□□□□ 0.77
COL6A1-206ENST00000498614 BTBD11A6QL63 1104 aa19.84■□□□□ 0.77
COL6A1-206ENST00000498614 MBD3O95983 291 aa19.84■□□□□ 0.77
COL6A1-206ENST00000498614 CHMLP26374 656 aa19.84■□□□□ 0.77
COL6A1-206ENST00000498614 NUTM1Q86Y26 1132 aa19.84■□□□□ 0.77
COL6A1-206ENST00000498614 STAP2Q9UGK3 403 aa19.84■□□□□ 0.77
COL6A1-206ENST00000498614 PI4KAP2A4QPH2 592 aa19.84■□□□□ 0.77
COL6A1-206ENST00000498614 NBPF7P0C2Y1 421 aaPredicted RBP19.84■□□□□ 0.77
COL6A1-206ENST00000498614 AKAP4Q5JQC9 854 aa19.84■□□□□ 0.77
COL6A1-206ENST00000498614 PI4KAP1Q8N8J0 262 aa19.84■□□□□ 0.77
COL6A1-206ENST00000498614 SURF6O75683 361 aaKnown RBP19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 769.6 ms