RNA–Protein interactions for RNA: ENST00000498579.5

ECM1-207, Transcript of extracellular matrix protein 1, humanhuman

TSL 3

Gene ECM1, Length 943 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-207ENST00000498579 A0A087WZG4 1122 aa24.98■■□□□ 1.59
ECM1-207ENST00000498579 USPL1Q5W0Q7 1092 aa24.97■■□□□ 1.59
ECM1-207ENST00000498579 CHD4Q14839 1912 aa24.96■■□□□ 1.59
ECM1-207ENST00000498579 PXDNLA1KZ92 1463 aa24.96■■□□□ 1.59
ECM1-207ENST00000498579 C4AP0C0L4 1744 aa24.95■■□□□ 1.59
ECM1-207ENST00000498579 CANXP27824 592 aaKnown RBP24.95■■□□□ 1.58
ECM1-207ENST00000498579 NPM2Q86SE8 214 aaKnown RBP24.95■■□□□ 1.58
ECM1-207ENST00000498579 MCM10Q7L590 875 aa24.94■■□□□ 1.58
ECM1-207ENST00000498579 UBR2Q8IWV8 1755 aa24.93■■□□□ 1.58
ECM1-207ENST00000498579 TM4SF1P30408 202 aa24.93■■□□□ 1.58
ECM1-207ENST00000498579 EIF5P55010 431 aaKnown RBP24.93■■□□□ 1.58
ECM1-207ENST00000498579 POLRMTO00411 1230 aaKnown RBP24.92■■□□□ 1.58
ECM1-207ENST00000498579 DDR1Q08345 913 aa24.92■■□□□ 1.58
ECM1-207ENST00000498579 MAPK8IP3Q9UPT6 1336 aa24.91■■□□□ 1.58
ECM1-207ENST00000498579 A0A0G2JLW4 131 aa24.91■■□□□ 1.58
ECM1-207ENST00000498579 IL6STP40189 918 aaPredicted RBP24.91■■□□□ 1.58
ECM1-207ENST00000498579 DDX10Q13206 875 aaKnown RBP24.91■■□□□ 1.58
ECM1-207ENST00000498579 WWC3Q9ULE0 1092 aa24.91■■□□□ 1.58
ECM1-207ENST00000498579 DPEP1P16444 411 aa24.9■■□□□ 1.58
ECM1-207ENST00000498579 VIRMAQ69YN4 1812 aaKnown RBP24.89■■□□□ 1.58
ECM1-207ENST00000498579 SNRPA1P09661 255 aaKnown RBP24.89■■□□□ 1.58
ECM1-207ENST00000498579 TAF7Q15545 349 aaPredicted RBP24.89■■□□□ 1.58
ECM1-207ENST00000498579 PNISRQ8TF01 805 aaKnown RBP24.89■■□□□ 1.58
ECM1-207ENST00000498579 PLEKHF1Q96S99 279 aa24.89■■□□□ 1.58
ECM1-207ENST00000498579 BCS1LQ9Y276 419 aa24.89■■□□□ 1.58
ECM1-207ENST00000498579 DCTN1Q14203 1278 aa24.88■■□□□ 1.57
ECM1-207ENST00000498579 NFIXQ14938 502 aa24.88■■□□□ 1.57
ECM1-207ENST00000498579 MYBBP1AQ9BQG0 1328 aaKnown RBP24.87■■□□□ 1.57
ECM1-207ENST00000498579 KIF13BQ9NQT8 1826 aa24.87■■□□□ 1.57
ECM1-207ENST00000498579 KCNQ3O43525 872 aa24.87■■□□□ 1.57
ECM1-207ENST00000498579 NFE2L2Q16236 605 aa24.87■■□□□ 1.57
ECM1-207ENST00000498579 PIM2Q9P1W9 311 aa24.87■■□□□ 1.57
ECM1-207ENST00000498579 ZNF330Q9Y3S2 320 aaPredicted RBP24.87■■□□□ 1.57
ECM1-207ENST00000498579 SIPA1L3O60292 1781 aaPredicted RBP24.87■■□□□ 1.57
ECM1-207ENST00000498579 BCL2L12Q9HB09 334 aa24.86■■□□□ 1.57
ECM1-207ENST00000498579 A1BGP04217 495 aa24.84■■□□□ 1.57
ECM1-207ENST00000498579 SERPINB2P05120 415 aa24.84■■□□□ 1.57
ECM1-207ENST00000498579 GIGYF1O75420 1035 aaPredicted RBP24.83■■□□□ 1.57
ECM1-207ENST00000498579 DALRD3Q5D0E6 543 aaKnown RBP24.83■■□□□ 1.57
ECM1-207ENST00000498579 USP16Q9Y5T5 823 aa24.83■■□□□ 1.57
ECM1-207ENST00000498579 KCNA3P22001 575 aa24.82■■□□□ 1.56
ECM1-207ENST00000498579 ADCY9O60503 1353 aa24.81■■□□□ 1.56
ECM1-207ENST00000498579 ATP10DQ9P241 1426 aa24.81■■□□□ 1.56
ECM1-207ENST00000498579 TBC1D2BQ9UPU7 963 aa24.81■■□□□ 1.56
ECM1-207ENST00000498579 DZIP3Q86Y13 1208 aaKnown RBP24.8■■□□□ 1.56
ECM1-207ENST00000498579 LMOD3Q0VAK6 560 aa24.79■■□□□ 1.56
ECM1-207ENST00000498579 BICDL1Q6ZP65 573 aa24.79■■□□□ 1.56
ECM1-207ENST00000498579 ARHGAP27Q6ZUM4 889 aa24.79■■□□□ 1.56
ECM1-207ENST00000498579 PDZRN3Q9UPQ7 1066 aa24.79■■□□□ 1.56
ECM1-207ENST00000498579 CARMIL3Q8ND23 1372 aa24.79■■□□□ 1.56
ECM1-207ENST00000498579 KIAA1551Q9HCM1 1747 aa24.78■■□□□ 1.56
ECM1-207ENST00000498579 RGL2O15211 777 aa24.78■■□□□ 1.56
ECM1-207ENST00000498579 CAMTA2O94983 1202 aa24.78■■□□□ 1.56
ECM1-207ENST00000498579 ZEB1P37275 1124 aaPredicted RBP24.78■■□□□ 1.56
ECM1-207ENST00000498579 TBC1D9BQ66K14 1250 aa24.78■■□□□ 1.56
ECM1-207ENST00000498579 GPBP1L1Q9HC44 474 aaPredicted RBP24.78■■□□□ 1.56
ECM1-207ENST00000498579 ZNF652Q9Y2D9 606 aa24.78■■□□□ 1.56
ECM1-207ENST00000498579 CHRNA5P30532 468 aa24.77■■□□□ 1.56
ECM1-207ENST00000498579 C1QTNF8P60827 252 aa24.77■■□□□ 1.56
ECM1-207ENST00000498579 CLEC4GQ6UXB4 293 aa24.77■■□□□ 1.56
ECM1-207ENST00000498579 SETDB2Q96T68 719 aa24.77■■□□□ 1.56
ECM1-207ENST00000498579 PRAMEF22A3QJZ6 481 aa24.76■■□□□ 1.55
ECM1-207ENST00000498579 WDR43Q15061 677 aaKnown RBP eCLIP24.76■■□□□ 1.55
ECM1-207ENST00000498579 MIS18AQ9NYP9 233 aa24.76■■□□□ 1.55
ECM1-207ENST00000498579 N4BP2Q86UW6 1770 aaPredicted RBP24.75■■□□□ 1.55
ECM1-207ENST00000498579 H0YIN7 160 aa24.74■■□□□ 1.55
ECM1-207ENST00000498579 NPHP1O15259 732 aa24.74■■□□□ 1.55
ECM1-207ENST00000498579 RIPK4P57078 832 aa24.74■■□□□ 1.55
ECM1-207ENST00000498579 SCN7AQ01118 1682 aa24.73■■□□□ 1.55
ECM1-207ENST00000498579 PDE6BP35913 854 aa24.73■■□□□ 1.55
ECM1-207ENST00000498579 EIF4A1P60842 406 aaKnown RBP24.73■■□□□ 1.55
ECM1-207ENST00000498579 BRIP1Q9BX63 1249 aa24.73■■□□□ 1.55
ECM1-207ENST00000498579 BABAM1Q9NWV8 329 aa24.73■■□□□ 1.55
ECM1-207ENST00000498579 NRXN2Q9P2S2 1712 aa24.72■■□□□ 1.55
ECM1-207ENST00000498579 ST5P78524 1137 aa24.72■■□□□ 1.55
ECM1-207ENST00000498579 C2CD5Q86YS7 1000 aa24.72■■□□□ 1.55
ECM1-207ENST00000498579 CNBD1Q8NA66 436 aa24.72■■□□□ 1.55
ECM1-207ENST00000498579 THUMPD2Q9BTF0 503 aaKnown RBP24.72■■□□□ 1.55
ECM1-207ENST00000498579 TMPOP42166 694 aaKnown RBP24.71■■□□□ 1.55
ECM1-207ENST00000498579 PIP4K2AP48426 406 aaPredicted RBP24.71■■□□□ 1.55
ECM1-207ENST00000498579 TTLL6Q8N841 843 aa24.71■■□□□ 1.55
ECM1-207ENST00000498579 PRKRIP1Q9H875 184 aaPredicted RBP24.71■■□□□ 1.55
ECM1-207ENST00000498579 TSPYL4Q9UJ04 414 aa24.71■■□□□ 1.55
ECM1-207ENST00000498579 NBPF26B4DH59 902 aa24.7■■□□□ 1.54
ECM1-207ENST00000498579 PRR5LQ6MZQ0 368 aa24.7■■□□□ 1.54
ECM1-207ENST00000498579 NBPF10Q6P3W6 841 aaKnown RBP24.7■■□□□ 1.54
ECM1-207ENST00000498579 NBPF15Q8N660 670 aa24.7■■□□□ 1.54
ECM1-207ENST00000498579 ZNF526Q8TF50 670 aaPredicted RBP24.69■■□□□ 1.54
ECM1-207ENST00000498579 RUNDC1Q96C34 613 aa24.68■■□□□ 1.54
ECM1-207ENST00000498579 ERBB4Q15303 1308 aa24.67■■□□□ 1.54
ECM1-207ENST00000498579 NBPF5PQ86XG9 351 aaPredicted RBP24.67■■□□□ 1.54
ECM1-207ENST00000498579 BRCA1P38398 1863 aaKnown RBP24.66■■□□□ 1.54
ECM1-207ENST00000498579 C9orf131Q5VYM1 1079 aa24.66■■□□□ 1.54
ECM1-207ENST00000498579 ERVV-1B6SEH8 477 aa24.64■■□□□ 1.54
ECM1-207ENST00000498579 TPTE2Q6XPS3 522 aa24.64■■□□□ 1.54
ECM1-207ENST00000498579 KIF6Q6ZMV9 814 aa24.64■■□□□ 1.54
ECM1-207ENST00000498579 CCDC146Q8IYE0 955 aa24.64■■□□□ 1.54
ECM1-207ENST00000498579 ZNF622Q969S3 477 aaKnown RBP eCLIP24.64■■□□□ 1.54
ECM1-207ENST00000498579 NIP7Q9Y221 180 aaKnown RBP eCLIP24.64■■□□□ 1.54
ECM1-207ENST00000498579 AFDNP55196 1824 aaKnown RBP24.63■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms