RNA–Protein interactions for RNA: ENST00000498574.1

IGKV1-39-201, Transcript of immunoglobulin kappa variable 1-39 (gene/pseudogene), humanhuman

APPRIS P1 BASIC

Gene IGKV1-39, Length 398 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1-39-201ENST00000498574 HDGFL2Q7Z4V5 671 aaPredicted RBP11.42□□□□□ -0.58
IGKV1-39-201ENST00000498574 C2CD5Q86YS7 1000 aa11.42□□□□□ -0.58
IGKV1-39-201ENST00000498574 SLC4A9Q96Q91 983 aa11.42□□□□□ -0.58
IGKV1-39-201ENST00000498574 RBM42Q9BTD8 480 aaKnown RBP11.42□□□□□ -0.58
IGKV1-39-201ENST00000498574 HACL1Q9UJ83 578 aa11.42□□□□□ -0.58
IGKV1-39-201ENST00000498574 USP42Q9H9J4 1324 aaKnown RBP11.41□□□□□ -0.58
IGKV1-39-201ENST00000498574 C21orf2O43822 256 aa11.41□□□□□ -0.58
IGKV1-39-201ENST00000498574 EPHX2P34913 555 aa11.41□□□□□ -0.58
IGKV1-39-201ENST00000498574 PNMA8AQ86V59 439 aaPredicted RBP11.41□□□□□ -0.58
IGKV1-39-201ENST00000498574 TMC1Q8TDI8 760 aa11.41□□□□□ -0.58
IGKV1-39-201ENST00000498574 CASP8AP2Q9UKL3 1982 aa11.41□□□□□ -0.58
IGKV1-39-201ENST00000498574 TAOK3Q9H2K8 898 aa11.4□□□□□ -0.58
IGKV1-39-201ENST00000498574 SMG6Q86US8 1419 aaKnown RBP11.4□□□□□ -0.58
IGKV1-39-201ENST00000498574 COG3Q96JB2 828 aa11.39□□□□□ -0.59
IGKV1-39-201ENST00000498574 SPG7Q9UQ90 795 aa11.39□□□□□ -0.59
IGKV1-39-201ENST00000498574 LTBP3Q9NS15 1303 aa11.38□□□□□ -0.59
IGKV1-39-201ENST00000498574 ITGB4P16144 1822 aa11.38□□□□□ -0.59
IGKV1-39-201ENST00000498574 BRPF1P55201 1214 aaPredicted RBP11.38□□□□□ -0.59
IGKV1-39-201ENST00000498574 ZNF622Q969S3 477 aaKnown RBP eCLIP11.38□□□□□ -0.59
IGKV1-39-201ENST00000498574 KDRP35968 1356 aa11.38□□□□□ -0.59
IGKV1-39-201ENST00000498574 CCDC88AQ3V6T2 1871 aa11.38□□□□□ -0.59
IGKV1-39-201ENST00000498574 EDC4Q6P2E9 1401 aaKnown RBP11.37□□□□□ -0.59
IGKV1-39-201ENST00000498574 CUL9Q8IWT3 2517 aa11.37□□□□□ -0.59
IGKV1-39-201ENST00000498574 ZPR1O75312 459 aa11.37□□□□□ -0.59
IGKV1-39-201ENST00000498574 FXR1P51114 621 aaKnown RBP eCLIP11.37□□□□□ -0.59
IGKV1-39-201ENST00000498574 FMR1Q06787 632 aaKnown RBP eCLIP11.37□□□□□ -0.59
IGKV1-39-201ENST00000498574 TLL2Q9Y6L7 1015 aa11.37□□□□□ -0.59
IGKV1-39-201ENST00000498574 THSD7BQ9C0I4 1608 aa11.37□□□□□ -0.59
IGKV1-39-201ENST00000498574 LTBP1Q14766 1721 aa11.37□□□□□ -0.59
IGKV1-39-201ENST00000498574 RGPD2P0DJD1 1756 aa11.36□□□□□ -0.59
IGKV1-39-201ENST00000498574 SERPINB2P05120 415 aa11.36□□□□□ -0.59
IGKV1-39-201ENST00000498574 CRKLP46109 303 aaKnown RBP11.36□□□□□ -0.59
IGKV1-39-201ENST00000498574 NFIXQ14938 502 aa11.36□□□□□ -0.59
IGKV1-39-201ENST00000498574 RRS1Q15050 365 aaKnown RBP11.36□□□□□ -0.59
IGKV1-39-201ENST00000498574 CST9Q5W186 159 aa11.36□□□□□ -0.59
IGKV1-39-201ENST00000498574 CIAPIN1Q6FI81 312 aa11.36□□□□□ -0.59
IGKV1-39-201ENST00000498574 SLC12A5Q9H2X9 1139 aa11.36□□□□□ -0.59
IGKV1-39-201ENST00000498574 TERF2IPQ9NYB0 399 aa11.36□□□□□ -0.59
IGKV1-39-201ENST00000498574 MON2Q7Z3U7 1717 aa11.35□□□□□ -0.59
IGKV1-39-201ENST00000498574 USPL1Q5W0Q7 1092 aa11.35□□□□□ -0.59
IGKV1-39-201ENST00000498574 RTL1A6NKG5 1358 aa11.35□□□□□ -0.59
IGKV1-39-201ENST00000498574 HSP90AB2PQ58FF8 381 aa11.34□□□□□ -0.59
IGKV1-39-201ENST00000498574 SLC17A8Q8NDX2 589 aa11.34□□□□□ -0.59
IGKV1-39-201ENST00000498574 SCN4AP35499 1836 aa11.34□□□□□ -0.59
IGKV1-39-201ENST00000498574 RNF123Q5XPI4 1314 aa11.34□□□□□ -0.59
IGKV1-39-201ENST00000498574 ZNF541Q9H0D2 1346 aa11.34□□□□□ -0.59
IGKV1-39-201ENST00000498574 TRAF5O00463 557 aa11.33□□□□□ -0.6
IGKV1-39-201ENST00000498574 IFNL2Q8IZJ0 200 aa11.33□□□□□ -0.6
IGKV1-39-201ENST00000498574 PHKG2P15735 406 aa11.32□□□□□ -0.6
IGKV1-39-201ENST00000498574 TRIM26Q12899 539 aaPredicted RBP11.32□□□□□ -0.6
IGKV1-39-201ENST00000498574 SAPCD2Q86UD0 394 aa11.32□□□□□ -0.6
IGKV1-39-201ENST00000498574 PDZRN3Q9UPQ7 1066 aa11.32□□□□□ -0.6
IGKV1-39-201ENST00000498574 A0A0C4DFX4 3053 aa11.32□□□□□ -0.6
IGKV1-39-201ENST00000498574 PTCD1O75127 700 aaKnown RBP11.31□□□□□ -0.6
IGKV1-39-201ENST00000498574 SOGA3Q5TF21 947 aa11.31□□□□□ -0.6
IGKV1-39-201ENST00000498574 BICDL1Q6ZP65 573 aa11.31□□□□□ -0.6
IGKV1-39-201ENST00000498574 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.31□□□□□ -0.6
IGKV1-39-201ENST00000498574 HPS5Q9UPZ3 1129 aa11.31□□□□□ -0.6
IGKV1-39-201ENST00000498574 DICER1Q9UPY3 1922 aaKnown RBP11.31□□□□□ -0.6
IGKV1-39-201ENST00000498574 A0A1W2PP64 1363 aa11.3□□□□□ -0.6
IGKV1-39-201ENST00000498574 INSRP06213 1382 aa11.3□□□□□ -0.6
IGKV1-39-201ENST00000498574 PDE6BP35913 854 aa11.3□□□□□ -0.6
IGKV1-39-201ENST00000498574 CTU1Q7Z7A3 348 aaKnown RBP11.3□□□□□ -0.6
IGKV1-39-201ENST00000498574 HHIPL1Q96JK4 782 aa11.3□□□□□ -0.6
IGKV1-39-201ENST00000498574 ADAMTSL1Q8N6G6 1762 aa11.3□□□□□ -0.6
IGKV1-39-201ENST00000498574 CARMIL3Q8ND23 1372 aa11.29□□□□□ -0.6
IGKV1-39-201ENST00000498574 ERVV-2B6SEH9 535 aa11.29□□□□□ -0.6
IGKV1-39-201ENST00000498574 NOGQ13253 232 aa11.29□□□□□ -0.6
IGKV1-39-201ENST00000498574 INTS5Q6P9B9 1019 aaKnown RBP11.29□□□□□ -0.6
IGKV1-39-201ENST00000498574 CNKSR1Q969H4 720 aa11.29□□□□□ -0.6
IGKV1-39-201ENST00000498574 ZIC5Q96T25 663 aa11.29□□□□□ -0.6
IGKV1-39-201ENST00000498574 BRIP1Q9BX63 1249 aa11.29□□□□□ -0.6
IGKV1-39-201ENST00000498574 CELF2O95319 508 aaKnown RBP11.28□□□□□ -0.6
IGKV1-39-201ENST00000498574 AKAP4Q5JQC9 854 aa11.28□□□□□ -0.6
IGKV1-39-201ENST00000498574 GPC2Q8N158 579 aa11.28□□□□□ -0.6
IGKV1-39-201ENST00000498574 ZNF277Q9NRM2 450 aaPredicted RBP11.28□□□□□ -0.6
IGKV1-39-201ENST00000498574 NARFQ9UHQ1 456 aa11.28□□□□□ -0.6
IGKV1-39-201ENST00000498574 MYH14Q7Z406 1995 aaKnown RBP11.28□□□□□ -0.6
IGKV1-39-201ENST00000498574 LMOD1P29536 600 aaPredicted RBP11.27□□□□□ -0.61
IGKV1-39-201ENST00000498574 PRPF40BQ6NWY9 871 aaKnown RBP11.27□□□□□ -0.61
IGKV1-39-201ENST00000498574 SAGE1Q9NXZ1 904 aa11.27□□□□□ -0.61
IGKV1-39-201ENST00000498574 FER1L6Q2WGJ9 1857 aa11.27□□□□□ -0.61
IGKV1-39-201ENST00000498574 DLEC1Q9Y238 1755 aa11.26□□□□□ -0.61
IGKV1-39-201ENST00000498574 FZD9O00144 591 aa11.26□□□□□ -0.61
IGKV1-39-201ENST00000498574 CABP4P57796 275 aa11.26□□□□□ -0.61
IGKV1-39-201ENST00000498574 CCDC24Q8N4L8 307 aa11.26□□□□□ -0.61
IGKV1-39-201ENST00000498574 BCL2L12Q9HB09 334 aa11.26□□□□□ -0.61
IGKV1-39-201ENST00000498574 ZNF831Q5JPB2 1677 aa11.25□□□□□ -0.61
IGKV1-39-201ENST00000498574 TRPA1O75762 1119 aa11.25□□□□□ -0.61
IGKV1-39-201ENST00000498574 EPS15P42566 896 aa11.25□□□□□ -0.61
IGKV1-39-201ENST00000498574 FKBP4Q02790 459 aaKnown RBP eCLIP11.25□□□□□ -0.61
IGKV1-39-201ENST00000498574 PKN2Q16513 984 aaKnown RBP11.25□□□□□ -0.61
IGKV1-39-201ENST00000498574 CCDC93Q567U6 631 aa11.25□□□□□ -0.61
IGKV1-39-201ENST00000498574 STYK1Q6J9G0 422 aa11.25□□□□□ -0.61
IGKV1-39-201ENST00000498574 USP50Q70EL3 339 aaPredicted RBP11.25□□□□□ -0.61
IGKV1-39-201ENST00000498574 GJA3Q9Y6H8 435 aa11.25□□□□□ -0.61
IGKV1-39-201ENST00000498574 COL5A3P25940 1745 aaPredicted RBP11.25□□□□□ -0.61
IGKV1-39-201ENST00000498574 SOS1Q07889 1333 aaPredicted RBP11.25□□□□□ -0.61
IGKV1-39-201ENST00000498574 FLT4P35916 1363 aa11.25□□□□□ -0.61
IGKV1-39-201ENST00000498574 RAB3GAP2Q9H2M9 1393 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms