RNA–Protein interactions for RNA: ENST00000498463.5

SNX13-212, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 687 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-212ENST00000498463 CADPSQ9ULU8 1353 aa12.37□□□□□ -0.43
SNX13-212ENST00000498463 PNMA6FA0A0J9YX94 578 aa12.36□□□□□ -0.43
SNX13-212ENST00000498463 ZBTB39O15060 712 aa12.36□□□□□ -0.43
SNX13-212ENST00000498463 PPM1GO15355 546 aaPredicted RBP12.36□□□□□ -0.43
SNX13-212ENST00000498463 GIMAP6Q6P9H5 292 aa12.36□□□□□ -0.43
SNX13-212ENST00000498463 SLC43A3Q8NBI5 491 aa12.36□□□□□ -0.43
SNX13-212ENST00000498463 MYO19Q96H55 970 aa12.36□□□□□ -0.43
SNX13-212ENST00000498463 DNAJC2Q99543 621 aaKnown RBP12.36□□□□□ -0.43
SNX13-212ENST00000498463 CAPN10Q9HC96 672 aa12.36□□□□□ -0.43
SNX13-212ENST00000498463 A6NJY4 79 aa12.35□□□□□ -0.43
SNX13-212ENST00000498463 PSMA6P60900 246 aaKnown RBP12.35□□□□□ -0.43
SNX13-212ENST00000498463 FAM26DQ5JW98 314 aa12.35□□□□□ -0.43
SNX13-212ENST00000498463 CYP2U1Q7Z449 544 aa12.35□□□□□ -0.43
SNX13-212ENST00000498463 GJD3Q8N144 294 aa12.35□□□□□ -0.43
SNX13-212ENST00000498463 ZNF784Q8NCA9 323 aaPredicted RBP12.35□□□□□ -0.43
SNX13-212ENST00000498463 NIF3L1Q9GZT8 377 aa12.35□□□□□ -0.43
SNX13-212ENST00000498463 PRKAG2Q9UGJ0 569 aa12.35□□□□□ -0.43
SNX13-212ENST00000498463 FSHRP23945 695 aa12.34□□□□□ -0.43
SNX13-212ENST00000498463 ALG1LQ6GMV1 187 aa12.34□□□□□ -0.43
SNX13-212ENST00000498463 NKX2-3Q8TAU0 364 aa12.34□□□□□ -0.43
SNX13-212ENST00000498463 TRIM52Q96A61 297 aa12.34□□□□□ -0.43
SNX13-212ENST00000498463 GNRH1P01148 92 aa12.33□□□□□ -0.44
SNX13-212ENST00000498463 TRIM32Q13049 653 aa12.33□□□□□ -0.44
SNX13-212ENST00000498463 MTFR1Q15390 333 aa12.33□□□□□ -0.44
SNX13-212ENST00000498463 ESCO1Q5FWF5 840 aa12.33□□□□□ -0.44
SNX13-212ENST00000498463 ACBD3Q9H3P7 528 aa12.33□□□□□ -0.44
SNX13-212ENST00000498463 NLRP2Q9NX02 1062 aa12.33□□□□□ -0.44
SNX13-212ENST00000498463 POLIQ9UNA4 740 aa12.33□□□□□ -0.44
SNX13-212ENST00000498463 GNA15P30679 374 aa12.32□□□□□ -0.44
SNX13-212ENST00000498463 SMTNP53814 917 aa12.32□□□□□ -0.44
SNX13-212ENST00000498463 DHX9Q08211 1270 aaKnown RBP12.32□□□□□ -0.44
SNX13-212ENST00000498463 BRD2P25440 801 aaKnown RBP12.31□□□□□ -0.44
SNX13-212ENST00000498463 SKOR1P84550 965 aa12.31□□□□□ -0.44
SNX13-212ENST00000498463 ARID5BQ14865 1188 aa12.31□□□□□ -0.44
SNX13-212ENST00000498463 DHX38Q92620 1227 aaKnown RBP12.31□□□□□ -0.44
SNX13-212ENST00000498463 EMILIN1Q9Y6C2 1016 aa12.31□□□□□ -0.44
SNX13-212ENST00000498463 LILRA1O75019 489 aa12.3□□□□□ -0.44
SNX13-212ENST00000498463 USP5P45974 858 aa12.3□□□□□ -0.44
SNX13-212ENST00000498463 WNT7BP56706 349 aa12.3□□□□□ -0.44
SNX13-212ENST00000498463 POTEAQ6S8J7 498 aa12.3□□□□□ -0.44
SNX13-212ENST00000498463 KCTD12Q96CX2 325 aaKnown RBP12.3□□□□□ -0.44
SNX13-212ENST00000498463 LNPKQ9C0E8 428 aa12.3□□□□□ -0.44
SNX13-212ENST00000498463 RAB6BQ9NRW1 208 aa12.3□□□□□ -0.44
SNX13-212ENST00000498463 CHMP3Q9Y3E7 222 aa12.3□□□□□ -0.44
SNX13-212ENST00000498463 USP3Q9Y6I4 520 aa12.3□□□□□ -0.44
SNX13-212ENST00000498463 ZBTB24O43167 697 aaPredicted RBP12.29□□□□□ -0.44
SNX13-212ENST00000498463 ATP2B1P20020 1258 aa12.29□□□□□ -0.44
SNX13-212ENST00000498463 MZF1P28698 734 aaPredicted RBP12.29□□□□□ -0.44
SNX13-212ENST00000498463 TNNI2P48788 182 aa12.29□□□□□ -0.44
SNX13-212ENST00000498463 GNL2Q13823 731 aaKnown RBP12.29□□□□□ -0.44
SNX13-212ENST00000498463 FBF1Q8TES7 1133 aa12.29□□□□□ -0.44
SNX13-212ENST00000498463 CRELD1Q96HD1 420 aa12.29□□□□□ -0.44
SNX13-212ENST00000498463 CFHR5Q9BXR6 569 aa12.29□□□□□ -0.44
SNX13-212ENST00000498463 CUEDC1Q9NWM3 386 aaPredicted RBP12.29□□□□□ -0.44
SNX13-212ENST00000498463 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.29□□□□□ -0.44
SNX13-212ENST00000498463 DNM1Q05193 864 aaKnown RBP12.28□□□□□ -0.44
SNX13-212ENST00000498463 ETFBKMTQ8IXQ9 262 aa12.28□□□□□ -0.44
SNX13-212ENST00000498463 NGLY1Q96IV0 654 aa12.28□□□□□ -0.44
SNX13-212ENST00000498463 CDK15Q96Q40 435 aa12.28□□□□□ -0.44
SNX13-212ENST00000498463 PDGFAP04085 211 aa12.27□□□□□ -0.45
SNX13-212ENST00000498463 GRM5P41594 1212 aa12.27□□□□□ -0.45
SNX13-212ENST00000498463 MYT1Q01538 1121 aa12.27□□□□□ -0.45
SNX13-212ENST00000498463 EDEM1Q92611 657 aa12.27□□□□□ -0.45
SNX13-212ENST00000498463 ARMC5Q96C12 935 aa12.27□□□□□ -0.45
SNX13-212ENST00000498463 ARHGEF10LQ9HCE6 1279 aa12.27□□□□□ -0.45
SNX13-212ENST00000498463 IQSEC3Q9UPP2 1182 aaPredicted RBP12.27□□□□□ -0.45
SNX13-212ENST00000498463 NCLP19338 710 aaKnown RBP12.26□□□□□ -0.45
SNX13-212ENST00000498463 GTF2F1P35269 517 aaKnown RBP eCLIP12.26□□□□□ -0.45
SNX13-212ENST00000498463 NOP9Q86U38 636 aaKnown RBP12.26□□□□□ -0.45
SNX13-212ENST00000498463 GMLQ99445 158 aa12.26□□□□□ -0.45
SNX13-212ENST00000498463 EML1O00423 815 aa12.25□□□□□ -0.45
SNX13-212ENST00000498463 CDK2AP1O14519 115 aa12.25□□□□□ -0.45
SNX13-212ENST00000498463 PPEF1O14829 653 aaPredicted RBP12.25□□□□□ -0.45
SNX13-212ENST00000498463 IL2RAP01589 272 aa12.25□□□□□ -0.45
SNX13-212ENST00000498463 CTSHP09668 335 aa12.25□□□□□ -0.45
SNX13-212ENST00000498463 ZAP70P43403 619 aa12.25□□□□□ -0.45
SNX13-212ENST00000498463 HIRAP54198 1017 aaPredicted RBP12.25□□□□□ -0.45
SNX13-212ENST00000498463 TLR1Q15399 786 aa12.25□□□□□ -0.45
SNX13-212ENST00000498463 EHBP1Q8NDI1 1231 aa12.25□□□□□ -0.45
SNX13-212ENST00000498463 CSRNP1Q96S65 589 aa12.25□□□□□ -0.45
SNX13-212ENST00000498463 SERTM1A2A2V5 107 aa12.24□□□□□ -0.45
SNX13-212ENST00000498463 DNAJA1P31689 397 aaKnown RBP12.24□□□□□ -0.45
SNX13-212ENST00000498463 DGKZQ13574 1117 aa12.24□□□□□ -0.45
SNX13-212ENST00000498463 PPP1R26Q5T8A7 1209 aaPredicted RBP12.24□□□□□ -0.45
SNX13-212ENST00000498463 SH3PXD2AQ5TCZ1 1133 aa12.24□□□□□ -0.45
SNX13-212ENST00000498463 XAGE2Q96GT9 111 aa12.24□□□□□ -0.45
SNX13-212ENST00000498463 AK5Q9Y6K8 562 aa12.24□□□□□ -0.45
SNX13-212ENST00000498463 ORC1Q13415 861 aa12.23□□□□□ -0.45
SNX13-212ENST00000498463 RTN1Q16799 776 aa12.23□□□□□ -0.45
SNX13-212ENST00000498463 CCDC116Q8IYX3 515 aa12.23□□□□□ -0.45
SNX13-212ENST00000498463 NBPF15Q8N660 670 aa12.23□□□□□ -0.45
SNX13-212ENST00000498463 TLL2Q9Y6L7 1015 aa12.23□□□□□ -0.45
SNX13-212ENST00000498463 ANKRD62A6NC57 917 aa12.22□□□□□ -0.45
SNX13-212ENST00000498463 ADD1P35611 737 aaKnown RBP12.22□□□□□ -0.45
SNX13-212ENST00000498463 C11orf91Q3C1V1 193 aa12.22□□□□□ -0.45
SNX13-212ENST00000498463 PLA2G2CQ5R387 149 aa12.22□□□□□ -0.45
SNX13-212ENST00000498463 ALDH16A1Q8IZ83 802 aa12.22□□□□□ -0.45
SNX13-212ENST00000498463 FRMD6Q96NE9 622 aa12.22□□□□□ -0.45
SNX13-212ENST00000498463 DDX41Q9UJV9 622 aaKnown RBP12.22□□□□□ -0.45
SNX13-212ENST00000498463 INPP5FQ9Y2H2 1132 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms