RNA–Protein interactions for RNA: ENST00000498439.1

CHTF18-213, Transcript of chromosome transmission fidelity factor 18, humanhuman

TSL 2

Gene CHTF18, Length 673 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTF18-213ENST00000498439 SOS1Q07889 1333 aaPredicted RBP24.5■■□□□ 1.51
CHTF18-213ENST00000498439 NPC1L1Q9UHC9 1359 aa24.5■■□□□ 1.51
CHTF18-213ENST00000498439 VIRMAQ69YN4 1812 aaKnown RBP24.49■■□□□ 1.51
CHTF18-213ENST00000498439 GNAT3A8MTJ3 354 aa24.48■■□□□ 1.51
CHTF18-213ENST00000498439 U2SURPO15042 1029 aaKnown RBP24.48■■□□□ 1.51
CHTF18-213ENST00000498439 BRCA1P38398 1863 aaKnown RBP24.48■■□□□ 1.51
CHTF18-213ENST00000498439 APLP1P51693 650 aa24.48■■□□□ 1.51
CHTF18-213ENST00000498439 DDR1Q08345 913 aa24.48■■□□□ 1.51
CHTF18-213ENST00000498439 C9orf131Q5VYM1 1079 aa24.48■■□□□ 1.51
CHTF18-213ENST00000498439 KDM2BQ8NHM5 1336 aa24.48■■□□□ 1.51
CHTF18-213ENST00000498439 MRC1P22897 1456 aa24.47■■□□□ 1.51
CHTF18-213ENST00000498439 CFAP53Q96M91 514 aa24.47■■□□□ 1.51
CHTF18-213ENST00000498439 COL15A1P39059 1388 aa24.46■■□□□ 1.51
CHTF18-213ENST00000498439 PDZRN3Q9UPQ7 1066 aa24.46■■□□□ 1.51
CHTF18-213ENST00000498439 NUDCQ9Y266 331 aa24.45■■□□□ 1.5
CHTF18-213ENST00000498439 SERPINB2P05120 415 aa24.44■■□□□ 1.5
CHTF18-213ENST00000498439 CANXP27824 592 aaKnown RBP24.44■■□□□ 1.5
CHTF18-213ENST00000498439 ZBTB1Q9Y2K1 713 aa24.44■■□□□ 1.5
CHTF18-213ENST00000498439 CHRNA5P30532 468 aa24.43■■□□□ 1.5
CHTF18-213ENST00000498439 NFIXQ14938 502 aa24.43■■□□□ 1.5
CHTF18-213ENST00000498439 RNF181Q9P0P0 153 aa24.43■■□□□ 1.5
CHTF18-213ENST00000498439 ZNF790Q6PG37 636 aa24.42■■□□□ 1.5
CHTF18-213ENST00000498439 RBM46Q8TBY0 533 aaKnown RBP24.42■■□□□ 1.5
CHTF18-213ENST00000498439 H0YIN7 160 aa24.41■■□□□ 1.5
CHTF18-213ENST00000498439 TTLL6Q8N841 843 aa24.41■■□□□ 1.5
CHTF18-213ENST00000498439 ADAMTS7Q9UKP4 1686 aa24.4■■□□□ 1.5
CHTF18-213ENST00000498439 ZC3H4Q9UPT8 1303 aaKnown RBP24.4■■□□□ 1.5
CHTF18-213ENST00000498439 FMNL2Q96PY5 1086 aa24.4■■□□□ 1.5
CHTF18-213ENST00000498439 EIF5P55010 431 aaKnown RBP24.39■■□□□ 1.49
CHTF18-213ENST00000498439 FSTL1Q12841 308 aa24.39■■□□□ 1.49
CHTF18-213ENST00000498439 CNGB1Q14028 1251 aaPredicted RBP24.39■■□□□ 1.49
CHTF18-213ENST00000498439 IFFO2Q5TF58 517 aa24.39■■□□□ 1.49
CHTF18-213ENST00000498439 NMRK2Q9NPI5 230 aa24.39■■□□□ 1.49
CHTF18-213ENST00000498439 KCPQ6ZWJ8 1503 aa24.39■■□□□ 1.49
CHTF18-213ENST00000498439 IL6STP40189 918 aaPredicted RBP24.38■■□□□ 1.49
CHTF18-213ENST00000498439 IL17REQ8NFR9 667 aa24.38■■□□□ 1.49
CHTF18-213ENST00000498439 HEG1Q9ULI3 1381 aa24.38■■□□□ 1.49
CHTF18-213ENST00000498439 PDE6BP35913 854 aa24.37■■□□□ 1.49
CHTF18-213ENST00000498439 AFDNP55196 1824 aaKnown RBP24.36■■□□□ 1.49
CHTF18-213ENST00000498439 LMNB1P20700 586 aa24.36■■□□□ 1.49
CHTF18-213ENST00000498439 C2CD5Q86YS7 1000 aa24.36■■□□□ 1.49
CHTF18-213ENST00000498439 RTF1Q92541 710 aaKnown RBP24.36■■□□□ 1.49
CHTF18-213ENST00000498439 ZNF496Q96IT1 587 aaPredicted RBP24.36■■□□□ 1.49
CHTF18-213ENST00000498439 UBR2Q8IWV8 1755 aa24.35■■□□□ 1.49
CHTF18-213ENST00000498439 BTBD11A6QL63 1104 aa24.35■■□□□ 1.49
CHTF18-213ENST00000498439 NPHP1O15259 732 aa24.35■■□□□ 1.49
CHTF18-213ENST00000498439 BICDL1Q6ZP65 573 aa24.35■■□□□ 1.49
CHTF18-213ENST00000498439 BCL2L12Q9HB09 334 aa24.35■■□□□ 1.49
CHTF18-213ENST00000498439 SBF1O95248 1867 aa24.34■■□□□ 1.49
CHTF18-213ENST00000498439 RRAGCQ9HB90 399 aa24.34■■□□□ 1.49
CHTF18-213ENST00000498439 ZNF330Q9Y3S2 320 aaPredicted RBP24.34■■□□□ 1.49
CHTF18-213ENST00000498439 NRXN2Q9P2S2 1712 aa24.33■■□□□ 1.49
CHTF18-213ENST00000498439 BRIP1Q9BX63 1249 aa24.33■■□□□ 1.49
CHTF18-213ENST00000498439 NEFMP07197 916 aa24.32■■□□□ 1.48
CHTF18-213ENST00000498439 DPY19L2Q6NUT2 758 aa24.32■■□□□ 1.48
CHTF18-213ENST00000498439 SETDB2Q96T68 719 aa24.32■■□□□ 1.48
CHTF18-213ENST00000498439 PRKAR2BP31323 418 aa24.31■■□□□ 1.48
CHTF18-213ENST00000498439 ZNF622Q969S3 477 aaKnown RBP eCLIP24.3■■□□□ 1.484e-7■■■□□ 15.6
CHTF18-213ENST00000498439 TBC1D2BQ9UPU7 963 aa24.3■■□□□ 1.48
CHTF18-213ENST00000498439 COL3A1P02461 1466 aaPredicted RBP24.3■■□□□ 1.48
CHTF18-213ENST00000498439 CARMIL3Q8ND23 1372 aa24.29■■□□□ 1.48
CHTF18-213ENST00000498439 GLTPD2A6NH11 291 aa24.29■■□□□ 1.48
CHTF18-213ENST00000498439 VEGFAP15692 232 aaPredicted RBP24.29■■□□□ 1.48
CHTF18-213ENST00000498439 ST5P78524 1137 aa24.29■■□□□ 1.48
CHTF18-213ENST00000498439 TBC1D9BQ66K14 1250 aa24.29■■□□□ 1.48
CHTF18-213ENST00000498439 SMC1BQ8NDV3 1235 aa24.29■■□□□ 1.48
CHTF18-213ENST00000498439 CEMIPQ8WUJ3 1361 aa24.29■■□□□ 1.48
CHTF18-213ENST00000498439 HTATSF1O43719 755 aaKnown RBP24.28■■□□□ 1.48
CHTF18-213ENST00000498439 U2AF1L5P0DN76 240 aaPredicted RBP24.28■■□□□ 1.48
CHTF18-213ENST00000498439 U2AF1Q01081 240 aaKnown RBP eCLIP24.28■■□□□ 1.48
CHTF18-213ENST00000498439 SNRPA1P09661 255 aaKnown RBP24.27■■□□□ 1.48
CHTF18-213ENST00000498439 SOGA3Q5TF21 947 aa24.27■■□□□ 1.48
CHTF18-213ENST00000498439 CLEC4GQ6UXB4 293 aa24.27■■□□□ 1.48
CHTF18-213ENST00000498439 CNKSR1Q969H4 720 aa24.27■■□□□ 1.48
CHTF18-213ENST00000498439 RSPH6AQ9H0K4 717 aa24.27■■□□□ 1.48
CHTF18-213ENST00000498439 ZNF652Q9Y2D9 606 aa24.27■■□□□ 1.48
CHTF18-213ENST00000498439 TNRC6CQ9HCJ0 1690 aaKnown RBP24.27■■□□□ 1.48
CHTF18-213ENST00000498439 DLEC1Q9Y238 1755 aa24.26■■□□□ 1.47
CHTF18-213ENST00000498439 A1BGP04217 495 aa24.26■■□□□ 1.47
CHTF18-213ENST00000498439 DZIP3Q86Y13 1208 aaKnown RBP24.26■■□□□ 1.47
CHTF18-213ENST00000498439 PHACTR3Q96KR7 559 aa24.26■■□□□ 1.47
CHTF18-213ENST00000498439 SIPA1L3O60292 1781 aaPredicted RBP24.25■■□□□ 1.47
CHTF18-213ENST00000498439 RASSF7Q02833 373 aa24.25■■□□□ 1.47
CHTF18-213ENST00000498439 DNAJC5GQ8N7S2 189 aa24.25■■□□□ 1.47
CHTF18-213ENST00000498439 CNBD1Q8NA66 436 aa24.25■■□□□ 1.47
CHTF18-213ENST00000498439 PRR5LQ6MZQ0 368 aa24.24■■□□□ 1.47
CHTF18-213ENST00000498439 CCDC88AQ3V6T2 1871 aa24.23■■□□□ 1.47
CHTF18-213ENST00000498439 RGL2O15211 777 aa24.22■■□□□ 1.47
CHTF18-213ENST00000498439 CAMTA2O94983 1202 aa24.22■■□□□ 1.47
CHTF18-213ENST00000498439 PPP2R1AP30153 589 aa24.22■■□□□ 1.47
CHTF18-213ENST00000498439 STYK1Q6J9G0 422 aa24.22■■□□□ 1.47
CHTF18-213ENST00000498439 PNNQ9H307 717 aaKnown RBP24.22■■□□□ 1.47
CHTF18-213ENST00000498439 USP16Q9Y5T5 823 aa24.22■■□□□ 1.47
CHTF18-213ENST00000498439 CEP350Q5VT06 3117 aa24.21■■□□□ 1.47
CHTF18-213ENST00000498439 MASTLQ96GX5 879 aa24.21■■□□□ 1.47
CHTF18-213ENST00000498439 C21orf2O43822 256 aa24.2■■□□□ 1.46
CHTF18-213ENST00000498439 TAF7Q15545 349 aaPredicted RBP24.2■■□□□ 1.46
CHTF18-213ENST00000498439 TPTE2Q6XPS3 522 aa24.2■■□□□ 1.46
CHTF18-213ENST00000498439 KLRG1Q96E93 195 aa24.2■■□□□ 1.46
CHTF18-213ENST00000498439 WDR90Q96KV7 1748 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms