RNA–Protein interactions for RNA: ENST00000498090.1

AFF3-215, Transcript of AF4/FMR2 family member 3, humanhuman

TSL 2

Gene AFF3, Length 1,673 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-215ENST00000498090 THSD7AQ9UPZ6 1657 aa15.48■□□□□ 0.07
AFF3-215ENST00000498090 SOCS7O14512 581 aa15.48■□□□□ 0.07
AFF3-215ENST00000498090 FAM98CQ17RN3 349 aaKnown RBP15.48■□□□□ 0.07
AFF3-215ENST00000498090 CDCA7Q9BWT1 371 aaPredicted RBP15.48■□□□□ 0.07
AFF3-215ENST00000498090 SCN11AQ9UI33 1791 aa15.47■□□□□ 0.07
AFF3-215ENST00000498090 CHL1O00533 1208 aa15.47■□□□□ 0.07
AFF3-215ENST00000498090 DDX54Q8TDD1 881 aaKnown RBP15.47■□□□□ 0.07
AFF3-215ENST00000498090 SLKQ9H2G2 1235 aaPredicted RBP15.47■□□□□ 0.07
AFF3-215ENST00000498090 TOGARAM1Q9Y4F4 1720 aa15.46■□□□□ 0.07
AFF3-215ENST00000498090 NKX1-1Q15270 411 aaPredicted RBP15.46■□□□□ 0.07
AFF3-215ENST00000498090 MIS18AQ9NYP9 233 aa15.46■□□□□ 0.07
AFF3-215ENST00000498090 SIPA1L3O60292 1781 aaPredicted RBP15.46■□□□□ 0.07
AFF3-215ENST00000498090 TSPYL6Q8N831 410 aa15.45■□□□□ 0.06
AFF3-215ENST00000498090 DCAF5Q96JK2 942 aa15.45■□□□□ 0.06
AFF3-215ENST00000498090 LNPKQ9C0E8 428 aa15.45■□□□□ 0.06
AFF3-215ENST00000498090 EXOC5O00471 708 aa15.44■□□□□ 0.06
AFF3-215ENST00000498090 ONECUT3O60422 494 aaPredicted RBP15.44■□□□□ 0.06
AFF3-215ENST00000498090 L1TD1Q5T7N2 865 aaKnown RBP15.44■□□□□ 0.06
AFF3-215ENST00000498090 INTS3Q68E01 1043 aaKnown RBP15.44■□□□□ 0.06
AFF3-215ENST00000498090 PTPRCP08575 1304 aa15.44■□□□□ 0.06
AFF3-215ENST00000498090 HSP90AB1P08238 724 aaKnown RBP15.44■□□□□ 0.06
AFF3-215ENST00000498090 DDB1Q16531 1140 aa15.44■□□□□ 0.06
AFF3-215ENST00000498090 ANKRD45Q5TZF3 282 aa15.44■□□□□ 0.06
AFF3-215ENST00000498090 KDM3BQ7LBC6 1761 aa15.43■□□□□ 0.06
AFF3-215ENST00000498090 TAF7Q15545 349 aaPredicted RBP15.43■□□□□ 0.06
AFF3-215ENST00000498090 C8orf58Q8NAV2 365 aa15.43■□□□□ 0.06
AFF3-215ENST00000498090 TSPYL4Q9UJ04 414 aa15.43■□□□□ 0.06
AFF3-215ENST00000498090 CIZ1Q9ULV3 898 aaPredicted RBP15.43■□□□□ 0.06
AFF3-215ENST00000498090 TEFQ10587 303 aa15.42■□□□□ 0.06
AFF3-215ENST00000498090 KRT24Q2M2I5 525 aa15.42■□□□□ 0.06
AFF3-215ENST00000498090 RPAP2Q8IXW5 612 aaPredicted RBP15.42■□□□□ 0.06
AFF3-215ENST00000498090 MARCH10Q8NA82 808 aaPredicted RBP15.42■□□□□ 0.06
AFF3-215ENST00000498090 SLC52A2Q9HAB3 445 aa15.42■□□□□ 0.06
AFF3-215ENST00000498090 EP400Q96L91 3159 aa15.41■□□□□ 0.06
AFF3-215ENST00000498090 KCNQ3O43525 872 aa15.41■□□□□ 0.06
AFF3-215ENST00000498090 PTMSP20962 102 aa15.41■□□□□ 0.06
AFF3-215ENST00000498090 BABAM1Q9NWV8 329 aa15.41■□□□□ 0.06
AFF3-215ENST00000498090 DDX11L8A8MPP1 907 aa15.4■□□□□ 0.06
AFF3-215ENST00000498090 MCM4P33991 863 aa15.4■□□□□ 0.06
AFF3-215ENST00000498090 DCTPP1Q9H773 170 aa15.4■□□□□ 0.06
AFF3-215ENST00000498090 BTBD11A6QL63 1104 aa15.39■□□□□ 0.05
AFF3-215ENST00000498090 CDC45O75419 566 aa15.39■□□□□ 0.05
AFF3-215ENST00000498090 SEPT12Q8IYM1 358 aa15.39■□□□□ 0.05
AFF3-215ENST00000498090 NFATC2IPQ8NCF5 419 aa15.39■□□□□ 0.05
AFF3-215ENST00000498090 DOT1LQ8TEK3 1739 aa15.39■□□□□ 0.05
AFF3-215ENST00000498090 A0A0G2JS52 829 aa15.38■□□□□ 0.05
AFF3-215ENST00000498090 ERVV-2B6SEH9 535 aa15.38■□□□□ 0.05
AFF3-215ENST00000498090 CABP4P57796 275 aa15.38■□□□□ 0.05
AFF3-215ENST00000498090 SIRT2Q8IXJ6 389 aa15.38■□□□□ 0.05
AFF3-215ENST00000498090 PAPPAQ13219 1627 aa15.38■□□□□ 0.05
AFF3-215ENST00000498090 ELL2O00472 640 aaPredicted RBP15.38■□□□□ 0.05
AFF3-215ENST00000498090 ANKRD44Q8N8A2 993 aa15.38■□□□□ 0.05
AFF3-215ENST00000498090 IL27Q8NEV9 243 aa15.38■□□□□ 0.05
AFF3-215ENST00000498090 DDIT3P35638 169 aa15.37■□□□□ 0.05
AFF3-215ENST00000498090 SLC39A6Q13433 755 aa15.37■□□□□ 0.05
AFF3-215ENST00000498090 ISY1Q9ULR0 285 aaKnown RBP15.37■□□□□ 0.05
AFF3-215ENST00000498090 SOS1Q07889 1333 aaPredicted RBP15.37■□□□□ 0.05
AFF3-215ENST00000498090 EIF4A1P60842 406 aaKnown RBP15.36■□□□□ 0.05
AFF3-215ENST00000498090 TBC1D9Q6ZT07 1266 aa15.35■□□□□ 0.05
AFF3-215ENST00000498090 C1orf115Q9H7X2 142 aa15.35■□□□□ 0.05
AFF3-215ENST00000498090 HEG1Q9ULI3 1381 aa15.34■□□□□ 0.05
AFF3-215ENST00000498090 BCL9O00512 1426 aa15.34■□□□□ 0.05
AFF3-215ENST00000498090 ITGB4P16144 1822 aa15.34■□□□□ 0.05
AFF3-215ENST00000498090 HMMRO75330 724 aa15.34■□□□□ 0.05
AFF3-215ENST00000498090 MAPK8IP2Q13387 824 aaPredicted RBP15.34■□□□□ 0.05
AFF3-215ENST00000498090 ZNF790Q6PG37 636 aa15.34■□□□□ 0.05
AFF3-215ENST00000498090 CASC1Q6TDU7 716 aa15.34■□□□□ 0.05
AFF3-215ENST00000498090 PIGBQ92521 554 aa15.34■□□□□ 0.05
AFF3-215ENST00000498090 TMOD3Q9NYL9 352 aa15.34■□□□□ 0.05
AFF3-215ENST00000498090 BRPF3Q9ULD4 1205 aa15.34■□□□□ 0.05
AFF3-215ENST00000498090 KCPQ6ZWJ8 1503 aa15.34■□□□□ 0.05
AFF3-215ENST00000498090 FAM182BQ5T319 152 aa15.33■□□□□ 0.04
AFF3-215ENST00000498090 PLEKHM2Q8IWE5 1019 aa15.33■□□□□ 0.04
AFF3-215ENST00000498090 UPF1Q92900 1129 aaKnown RBP eCLIP15.33■□□□□ 0.04
AFF3-215ENST00000498090 ACSBG1Q96GR2 724 aa15.33■□□□□ 0.04
AFF3-215ENST00000498090 GBP4Q96PP9 640 aa15.33■□□□□ 0.04
AFF3-215ENST00000498090 ATP10DQ9P241 1426 aa15.32■□□□□ 0.04
AFF3-215ENST00000498090 PRIM1P49642 420 aaKnown RBP15.32■□□□□ 0.04
AFF3-215ENST00000498090 CCT4P50991 539 aaKnown RBP15.32■□□□□ 0.04
AFF3-215ENST00000498090 TTC22Q5TAA0 569 aa15.32■□□□□ 0.04
AFF3-215ENST00000498090 UBR2Q8IWV8 1755 aa15.32■□□□□ 0.04
AFF3-215ENST00000498090 K7ELQ4 463 aaPredicted RBP15.32■□□□□ 0.04
AFF3-215ENST00000498090 SKOR2Q2VWA4 1001 aaPredicted RBP15.32■□□□□ 0.04
AFF3-215ENST00000498090 CEP85Q6P2H3 762 aa15.32■□□□□ 0.04
AFF3-215ENST00000498090 KIF2CQ99661 725 aa15.32■□□□□ 0.04
AFF3-215ENST00000498090 BRWD3Q6RI45 1802 aa15.31■□□□□ 0.04
AFF3-215ENST00000498090 C5P01031 1676 aa15.31■□□□□ 0.04
AFF3-215ENST00000498090 PRAMEF22A3QJZ6 481 aa15.31■□□□□ 0.04
AFF3-215ENST00000498090 GOLGA6L3A6NEY3 463 aa15.31■□□□□ 0.04
AFF3-215ENST00000498090 RABEP1Q15276 862 aa15.31■□□□□ 0.04
AFF3-215ENST00000498090 KRT27Q7Z3Y8 459 aa15.31■□□□□ 0.04
AFF3-215ENST00000498090 FAM43AQ8N2R8 423 aa15.31■□□□□ 0.04
AFF3-215ENST00000498090 ZNF496Q96IT1 587 aaPredicted RBP15.31■□□□□ 0.04
AFF3-215ENST00000498090 KCNQ2O43526 872 aa15.3■□□□□ 0.04
AFF3-215ENST00000498090 TRAK2O60296 914 aa15.3■□□□□ 0.04
AFF3-215ENST00000498090 SYTL4Q96C24 671 aaPredicted RBP15.3■□□□□ 0.04
AFF3-215ENST00000498090 ASAP1Q9ULH1 1129 aa15.3■□□□□ 0.04
AFF3-215ENST00000498090 FSD2A1L4K1 749 aa15.29■□□□□ 0.04
AFF3-215ENST00000498090 GIGYF1O75420 1035 aaPredicted RBP15.29■□□□□ 0.04
AFF3-215ENST00000498090 RAB3GAP1Q15042 981 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms