RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 NETO1Q8TDF5 533 aa1.9□□□□□ -2.11
XRN1-214ENST00000498077 TANKQ92844 425 aa1.9□□□□□ -2.11
XRN1-214ENST00000498077 IRF7Q92985 503 aa1.9□□□□□ -2.11
XRN1-214ENST00000498077 RNF25Q96BH1 459 aaPredicted RBP1.9□□□□□ -2.11
XRN1-214ENST00000498077 ADAM33Q9BZ11 813 aa1.9□□□□□ -2.11
XRN1-214ENST00000498077 LEMD3Q9Y2U8 911 aa1.9□□□□□ -2.11
XRN1-214ENST00000498077 PLEKHG2Q9H7P9 1386 aa1.9□□□□□ -2.11
XRN1-214ENST00000498077 ZNF536O15090 1300 aa1.9□□□□□ -2.11
XRN1-214ENST00000498077 ERBB4Q15303 1308 aa1.9□□□□□ -2.11
XRN1-214ENST00000498077 PPP1R37O75864 691 aa1.9□□□□□ -2.11
XRN1-214ENST00000498077 PSEN2P49810 448 aa1.9□□□□□ -2.11
XRN1-214ENST00000498077 CTC1Q2NKJ3 1217 aa1.9□□□□□ -2.11
XRN1-214ENST00000498077 NCAPG2Q86XI2 1143 aa1.9□□□□□ -2.11
XRN1-214ENST00000498077 TTC13Q8NBP0 860 aa1.9□□□□□ -2.11
XRN1-214ENST00000498077 KHSRPQ92945 711 aaKnown RBP eCLIP1.9□□□□□ -2.111e-6■■■■□ 22.5
XRN1-214ENST00000498077 NSFL1CQ9UNZ2 370 aaKnown RBP1.9□□□□□ -2.11
XRN1-214ENST00000498077 WASF2Q9Y6W5 498 aa1.9□□□□□ -2.11
XRN1-214ENST00000498077 DIAPH2O60879 1101 aa1.89□□□□□ -2.11
XRN1-214ENST00000498077 LMO1P25800 156 aa1.89□□□□□ -2.11
XRN1-214ENST00000498077 CHKAP35790 457 aa1.89□□□□□ -2.11
XRN1-214ENST00000498077 SLC19A1P41440 591 aa1.89□□□□□ -2.11
XRN1-214ENST00000498077 SMC1BQ8NDV3 1235 aa1.89□□□□□ -2.11
XRN1-214ENST00000498077 DPF1Q92782 380 aa1.89□□□□□ -2.11
XRN1-214ENST00000498077 CITED2Q99967 270 aaPredicted RBP1.89□□□□□ -2.11
XRN1-214ENST00000498077 ZNF341Q9BYN7 854 aa1.89□□□□□ -2.11
XRN1-214ENST00000498077 FAM184BQ9ULE4 1060 aa1.89□□□□□ -2.11
XRN1-214ENST00000498077 CASZ1Q86V15 1759 aa1.89□□□□□ -2.11
XRN1-214ENST00000498077 HRO43593 1189 aa1.89□□□□□ -2.11
XRN1-214ENST00000498077 ACTN4O43707 911 aaKnown RBP1.89□□□□□ -2.11
XRN1-214ENST00000498077 ITGBL1O95965 494 aaPredicted RBP1.89□□□□□ -2.11
XRN1-214ENST00000498077 ADH1BP00325 375 aa1.89□□□□□ -2.11
XRN1-214ENST00000498077 CLCN1P35523 988 aa1.89□□□□□ -2.11
XRN1-214ENST00000498077 RNASELQ05823 741 aaKnown RBP1.89□□□□□ -2.11
XRN1-214ENST00000498077 R3HDM1Q15032 1099 aaKnown RBP1.89□□□□□ -2.11
XRN1-214ENST00000498077 NUDT18Q6ZVK8 323 aa1.89□□□□□ -2.11
XRN1-214ENST00000498077 ZCRB1Q8TBF4 217 aaKnown RBP1.89□□□□□ -2.11
XRN1-214ENST00000498077 DDX12PQ92771 950 aa1.89□□□□□ -2.11
XRN1-214ENST00000498077 ZNF223Q9UK11 482 aaPredicted RBP1.89□□□□□ -2.11
XRN1-214ENST00000498077 SOGA1O94964 1423 aa1.89□□□□□ -2.11
XRN1-214ENST00000498077 ERVK-7P63135 1459 aa1.89□□□□□ -2.11
XRN1-214ENST00000498077 GRM1Q13255 1194 aa1.89□□□□□ -2.11
XRN1-214ENST00000498077 GPR162Q16538 588 aa1.89□□□□□ -2.11
XRN1-214ENST00000498077 C6orf118Q5T5N4 469 aa1.89□□□□□ -2.11
XRN1-214ENST00000498077 RBM26Q5T8P6 1007 aaKnown RBP1.89□□□□□ -2.11
XRN1-214ENST00000498077 MPRIPQ6WCQ1 1025 aa1.89□□□□□ -2.11
XRN1-214ENST00000498077 EFCC1Q9HA90 598 aa1.89□□□□□ -2.11
XRN1-214ENST00000498077 TMOD2Q9NZR1 351 aa1.89□□□□□ -2.11
XRN1-214ENST00000498077 VAV3Q9UKW4 847 aa1.89□□□□□ -2.11
XRN1-214ENST00000498077 NPHP4O75161 1426 aaPredicted RBP1.89□□□□□ -2.11
XRN1-214ENST00000498077 ESRRAP11474 423 aaPredicted RBP1.89□□□□□ -2.11
XRN1-214ENST00000498077 MAP2K1Q02750 393 aaPredicted RBP1.89□□□□□ -2.11
XRN1-214ENST00000498077 KRTAP21-3Q3LHN1 58 aa1.89□□□□□ -2.11
XRN1-214ENST00000498077 RICTORQ6R327 1708 aa1.89□□□□□ -2.11
XRN1-214ENST00000498077 MICALCLQ6ZW33 695 aa1.89□□□□□ -2.11
XRN1-214ENST00000498077 SECISBP2LQ93073 1101 aaKnown RBP1.89□□□□□ -2.11
XRN1-214ENST00000498077 CHAMP1Q96JM3 812 aa1.89□□□□□ -2.11
XRN1-214ENST00000498077 RUSC2Q8N2Y8 1516 aa1.89□□□□□ -2.11
XRN1-214ENST00000498077 TNIKQ9UKE5 1360 aa1.89□□□□□ -2.11
XRN1-214ENST00000498077 PTPRGP23470 1445 aa1.89□□□□□ -2.11
XRN1-214ENST00000498077 SETD5Q9C0A6 1442 aa1.89□□□□□ -2.11
XRN1-214ENST00000498077 SPDYE5A6NIY4 337 aa1.89□□□□□ -2.11
XRN1-214ENST00000498077 MEIS1O00470 390 aa1.89□□□□□ -2.11
XRN1-214ENST00000498077 P3H1Q32P28 736 aa1.89□□□□□ -2.11
XRN1-214ENST00000498077 FAM174AQ8TBP5 190 aa1.89□□□□□ -2.11
XRN1-214ENST00000498077 CYP26B1Q9NR63 512 aa1.89□□□□□ -2.11
XRN1-214ENST00000498077 STRN4Q9NRL3 753 aa1.89□□□□□ -2.11
XRN1-214ENST00000498077 IQGAP1P46940 1657 aa1.89□□□□□ -2.11
XRN1-214ENST00000498077 ZFHX2Q9C0A1 2572 aaPredicted RBP1.89□□□□□ -2.11
XRN1-214ENST00000498077 UACAQ9BZF9 1416 aa1.88□□□□□ -2.11
XRN1-214ENST00000498077 SOBPA7XYQ1 873 aa1.88□□□□□ -2.11
XRN1-214ENST00000498077 APOL3O95236 402 aa1.88□□□□□ -2.11
XRN1-214ENST00000498077 ATP6V1AP38606 617 aa1.88□□□□□ -2.11
XRN1-214ENST00000498077 MAP3K12Q12852 859 aa1.88□□□□□ -2.11
XRN1-214ENST00000498077 TSGA10IPQ3SY00 556 aa1.88□□□□□ -2.11
XRN1-214ENST00000498077 CDCA8Q53HL2 280 aa1.88□□□□□ -2.11
XRN1-214ENST00000498077 EMC10Q5UCC4 262 aa1.88□□□□□ -2.11
XRN1-214ENST00000498077 ANKLE1Q8NAG6 615 aa1.88□□□□□ -2.11
XRN1-214ENST00000498077 KATNAL1Q9BW62 490 aa1.88□□□□□ -2.11
XRN1-214ENST00000498077 SLC29A3Q9BZD2 475 aa1.88□□□□□ -2.11
XRN1-214ENST00000498077 NEUROD4Q9HD90 331 aa1.88□□□□□ -2.11
XRN1-214ENST00000498077 SALL4Q9UJQ4 1053 aa1.88□□□□□ -2.11
XRN1-214ENST00000498077 ABCA9Q8IUA7 1624 aa1.88□□□□□ -2.11
XRN1-214ENST00000498077 NKTRP30414 1462 aaKnown RBP1.88□□□□□ -2.11
XRN1-214ENST00000498077 NCKAP5LQ9HCH0 1330 aa1.88□□□□□ -2.11
XRN1-214ENST00000498077 K7ELQ4 463 aaPredicted RBP1.88□□□□□ -2.11
XRN1-214ENST00000498077 KRT38O76015 456 aa1.88□□□□□ -2.11
XRN1-214ENST00000498077 CTHP32929 405 aa1.88□□□□□ -2.11
XRN1-214ENST00000498077 MRE11P49959 708 aa1.88□□□□□ -2.11
XRN1-214ENST00000498077 PRMT2P55345 433 aa1.88□□□□□ -2.11
XRN1-214ENST00000498077 CDC16Q13042 620 aa1.88□□□□□ -2.11
XRN1-214ENST00000498077 EPHA10Q5JZY3 1008 aa1.88□□□□□ -2.11
XRN1-214ENST00000498077 CCDC185Q8N715 623 aa1.88□□□□□ -2.11
XRN1-214ENST00000498077 SGF29Q96ES7 293 aa1.88□□□□□ -2.11
XRN1-214ENST00000498077 HAPLN3Q96S86 360 aa1.88□□□□□ -2.11
XRN1-214ENST00000498077 AXIN2Q9Y2T1 843 aa1.88□□□□□ -2.11
XRN1-214ENST00000498077 MINK1Q8N4C8 1332 aaPredicted RBP1.88□□□□□ -2.11
XRN1-214ENST00000498077 PRAG1Q86YV5 1406 aa1.88□□□□□ -2.11
XRN1-214ENST00000498077 RNF225M0QZC1 329 aaPredicted RBP1.88□□□□□ -2.11
XRN1-214ENST00000498077 SIAH2O43255 324 aa1.88□□□□□ -2.11
XRN1-214ENST00000498077 CFHP08603 1231 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms