RNA–Protein interactions for RNA: ENST00000498015.2

NEB-217, Transcript of nebulin, humanhuman

TSL 5

Gene NEB, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-217ENST00000498015 VIRMAQ69YN4 1812 aaKnown RBP9.73□□□□□ -0.85
NEB-217ENST00000498015 PPP2R1AP30153 589 aa9.73□□□□□ -0.85
NEB-217ENST00000498015 PRKAR2BP31323 418 aa9.73□□□□□ -0.85
NEB-217ENST00000498015 DDR1Q08345 913 aa9.73□□□□□ -0.85
NEB-217ENST00000498015 PHACTR3Q96KR7 559 aa9.73□□□□□ -0.85
NEB-217ENST00000498015 NUDCQ9Y266 331 aa9.73□□□□□ -0.85
NEB-217ENST00000498015 ZBTB1Q9Y2K1 713 aa9.73□□□□□ -0.85
NEB-217ENST00000498015 SOS1Q07889 1333 aaPredicted RBP9.73□□□□□ -0.85
NEB-217ENST00000498015 C4AP0C0L4 1744 aa9.73□□□□□ -0.85
NEB-217ENST00000498015 KIF13BQ9NQT8 1826 aa9.72□□□□□ -0.85
NEB-217ENST00000498015 KCPQ6ZWJ8 1503 aa9.72□□□□□ -0.85
NEB-217ENST00000498015 ADAMTS7Q9UKP4 1686 aa9.72□□□□□ -0.85
NEB-217ENST00000498015 SENP3-EIF4A1A0A087X0R7 540 aa9.72□□□□□ -0.85
NEB-217ENST00000498015 FCHSD2O94868 740 aa9.72□□□□□ -0.85
NEB-217ENST00000498015 U2AF1L5P0DN76 240 aaPredicted RBP9.72□□□□□ -0.85
NEB-217ENST00000498015 CANXP27824 592 aaKnown RBP9.72□□□□□ -0.85
NEB-217ENST00000498015 U2AF1Q01081 240 aaKnown RBP eCLIP9.72□□□□□ -0.85
NEB-217ENST00000498015 VSIG10Q8N0Z9 540 aa9.72□□□□□ -0.85
NEB-217ENST00000498015 ZNF526Q8TF50 670 aaPredicted RBP9.72□□□□□ -0.85
NEB-217ENST00000498015 RSPH6AQ9H0K4 717 aa9.72□□□□□ -0.85
NEB-217ENST00000498015 GPBP1L1Q9HC44 474 aaPredicted RBP9.72□□□□□ -0.85
NEB-217ENST00000498015 N4BP2Q86UW6 1770 aaPredicted RBP9.72□□□□□ -0.85
NEB-217ENST00000498015 POLRMTO00411 1230 aaKnown RBP9.71□□□□□ -0.86
NEB-217ENST00000498015 STARD3NLO95772 234 aa9.71□□□□□ -0.86
NEB-217ENST00000498015 KCNA3P22001 575 aa9.71□□□□□ -0.86
NEB-217ENST00000498015 TM4SF1P30408 202 aa9.71□□□□□ -0.86
NEB-217ENST00000498015 ZNF790Q6PG37 636 aa9.71□□□□□ -0.86
NEB-217ENST00000498015 ARHGAP27Q6ZUM4 889 aa9.71□□□□□ -0.86
NEB-217ENST00000498015 ZNF496Q96IT1 587 aaPredicted RBP9.71□□□□□ -0.86
NEB-217ENST00000498015 NARFQ9UHQ1 456 aa9.71□□□□□ -0.86
NEB-217ENST00000498015 ADCY9O60503 1353 aa9.71□□□□□ -0.86
NEB-217ENST00000498015 COL15A1P39059 1388 aa9.71□□□□□ -0.86
NEB-217ENST00000498015 NFIXQ14938 502 aa9.7□□□□□ -0.86
NEB-217ENST00000498015 PIM2Q9P1W9 311 aa9.7□□□□□ -0.86
NEB-217ENST00000498015 KIAA1551Q9HCM1 1747 aa9.7□□□□□ -0.86
NEB-217ENST00000498015 A0A087WZG4 1122 aa9.69□□□□□ -0.86
NEB-217ENST00000498015 KCNQ3O43525 872 aa9.69□□□□□ -0.86
NEB-217ENST00000498015 CHRNA5P30532 468 aa9.69□□□□□ -0.86
NEB-217ENST00000498015 FMNL2Q96PY5 1086 aa9.69□□□□□ -0.86
NEB-217ENST00000498015 TEX13AQ9BXU3 409 aaPredicted RBP9.69□□□□□ -0.86
NEB-217ENST00000498015 BCL2L12Q9HB09 334 aa9.69□□□□□ -0.86
NEB-217ENST00000498015 HEG1Q9ULI3 1381 aa9.69□□□□□ -0.86
NEB-217ENST00000498015 ZNF330Q9Y3S2 320 aaPredicted RBP9.69□□□□□ -0.86
NEB-217ENST00000498015 UBR2Q8IWV8 1755 aa9.68□□□□□ -0.86
NEB-217ENST00000498015 CEMIPQ8WUJ3 1361 aa9.68□□□□□ -0.86
NEB-217ENST00000498015 BTBD11A6QL63 1104 aa9.68□□□□□ -0.86
NEB-217ENST00000498015 SERPINB2P05120 415 aa9.68□□□□□ -0.86
NEB-217ENST00000498015 EIF5P55010 431 aaKnown RBP9.68□□□□□ -0.86
NEB-217ENST00000498015 RALBP1Q15311 655 aa9.68□□□□□ -0.86
NEB-217ENST00000498015 DALRD3Q5D0E6 543 aaKnown RBP9.68□□□□□ -0.86
NEB-217ENST00000498015 BICDL1Q6ZP65 573 aa9.68□□□□□ -0.86
NEB-217ENST00000498015 MCM10Q7L590 875 aa9.68□□□□□ -0.86
NEB-217ENST00000498015 RTF1Q92541 710 aaKnown RBP9.68□□□□□ -0.86
NEB-217ENST00000498015 A1BGP04217 495 aa9.67□□□□□ -0.86
NEB-217ENST00000498015 DCTN1Q14203 1278 aa9.67□□□□□ -0.86
NEB-217ENST00000498015 NPM2Q86SE8 214 aaKnown RBP9.67□□□□□ -0.86
NEB-217ENST00000498015 PRKRIP1Q9H875 184 aaPredicted RBP9.67□□□□□ -0.86
NEB-217ENST00000498015 TBC1D2BQ9UPU7 963 aa9.67□□□□□ -0.86
NEB-217ENST00000498015 SIPA1L3O60292 1781 aaPredicted RBP9.66□□□□□ -0.86
NEB-217ENST00000498015 IL6STP40189 918 aaPredicted RBP9.66□□□□□ -0.86
NEB-217ENST00000498015 C9orf131Q5VYM1 1079 aa9.66□□□□□ -0.86
NEB-217ENST00000498015 BRCA1P38398 1863 aaKnown RBP9.66□□□□□ -0.86
NEB-217ENST00000498015 HTATSF1O43719 755 aaKnown RBP9.65□□□□□ -0.86
NEB-217ENST00000498015 NEFMP07197 916 aa9.65□□□□□ -0.86
NEB-217ENST00000498015 PIP4K2AP48426 406 aaPredicted RBP9.65□□□□□ -0.86
NEB-217ENST00000498015 TBC1D9BQ66K14 1250 aa9.65□□□□□ -0.86
NEB-217ENST00000498015 USP16Q9Y5T5 823 aa9.65□□□□□ -0.86
NEB-217ENST00000498015 AFDNP55196 1824 aaKnown RBP9.65□□□□□ -0.86
NEB-217ENST00000498015 ARFGEF1Q9Y6D6 1849 aa9.64□□□□□ -0.87
NEB-217ENST00000498015 PRAMEF22A3QJZ6 481 aa9.64□□□□□ -0.87
NEB-217ENST00000498015 KIF3CO14782 793 aa9.64□□□□□ -0.87
NEB-217ENST00000498015 CAMTA2O94983 1202 aa9.64□□□□□ -0.87
NEB-217ENST00000498015 SNRPA1P09661 255 aaKnown RBP9.64□□□□□ -0.87
NEB-217ENST00000498015 TAF7Q15545 349 aaPredicted RBP9.64□□□□□ -0.87
NEB-217ENST00000498015 C2CD5Q86YS7 1000 aa9.64□□□□□ -0.87
NEB-217ENST00000498015 RNF181Q9P0P0 153 aa9.64□□□□□ -0.87
NEB-217ENST00000498015 CARMIL3Q8ND23 1372 aa9.63□□□□□ -0.87
NEB-217ENST00000498015 H0YIN7 160 aa9.63□□□□□ -0.87
NEB-217ENST00000498015 DZIP3Q86Y13 1208 aaKnown RBP9.63□□□□□ -0.87
NEB-217ENST00000498015 CCDC24Q8N4L8 307 aa9.63□□□□□ -0.87
NEB-217ENST00000498015 TTLL6Q8N841 843 aa9.63□□□□□ -0.87
NEB-217ENST00000498015 NMRK2Q9NPI5 230 aa9.63□□□□□ -0.87
NEB-217ENST00000498015 MIS18AQ9NYP9 233 aa9.63□□□□□ -0.87
NEB-217ENST00000498015 NRXN2Q9P2S2 1712 aa9.62□□□□□ -0.87
NEB-217ENST00000498015 CEP350Q5VT06 3117 aa9.62□□□□□ -0.87
NEB-217ENST00000498015 NPHP1O15259 732 aa9.62□□□□□ -0.87
NEB-217ENST00000498015 RASSF7Q02833 373 aa9.62□□□□□ -0.87
NEB-217ENST00000498015 PRR5LQ6MZQ0 368 aa9.62□□□□□ -0.87
NEB-217ENST00000498015 ZNF622Q969S3 477 aaKnown RBP eCLIP9.62□□□□□ -0.87
NEB-217ENST00000498015 SETDB2Q96T68 719 aa9.62□□□□□ -0.87
NEB-217ENST00000498015 BRIP1Q9BX63 1249 aa9.62□□□□□ -0.87
NEB-217ENST00000498015 NBPF26B4DH59 902 aa9.61□□□□□ -0.87
NEB-217ENST00000498015 HSPA6P17066 643 aa9.61□□□□□ -0.87
NEB-217ENST00000498015 PDE6BP35913 854 aa9.61□□□□□ -0.87
NEB-217ENST00000498015 NFE2L2Q16236 605 aa9.61□□□□□ -0.87
NEB-217ENST00000498015 NBPF10Q6P3W6 841 aaKnown RBP9.61□□□□□ -0.87
NEB-217ENST00000498015 NBPF15Q8N660 670 aa9.61□□□□□ -0.87
NEB-217ENST00000498015 CNBD1Q8NA66 436 aa9.61□□□□□ -0.87
NEB-217ENST00000498015 PLEKHF1Q96S99 279 aa9.61□□□□□ -0.87
NEB-217ENST00000498015 MAPK8IP3Q9UPT6 1336 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms