RNA–Protein interactions for RNA: ENST00000497978.1

NUDCD3-211, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-211ENST00000497978 TEFQ10587 303 aa15.77■□□□□ 0.12
NUDCD3-211ENST00000497978 FKBP8Q14318 412 aa15.77■□□□□ 0.12
NUDCD3-211ENST00000497978 BCS1LQ9Y276 419 aa15.77■□□□□ 0.12
NUDCD3-211ENST00000497978 SOS1Q07889 1333 aaPredicted RBP15.76■□□□□ 0.11
NUDCD3-211ENST00000497978 SENP3-EIF4A1A0A087X0R7 540 aa15.76■□□□□ 0.11
NUDCD3-211ENST00000497978 DPEP1P16444 411 aa15.76■□□□□ 0.11
NUDCD3-211ENST00000497978 GPBP1L1Q9HC44 474 aaPredicted RBP15.76■□□□□ 0.11
NUDCD3-211ENST00000497978 KCPQ6ZWJ8 1503 aa15.76■□□□□ 0.11
NUDCD3-211ENST00000497978 N4BP2Q86UW6 1770 aaPredicted RBP15.76■□□□□ 0.11
NUDCD3-211ENST00000497978 GOLGB1Q14789 3259 aaKnown RBP15.75■□□□□ 0.11
NUDCD3-211ENST00000497978 ADCY9O60503 1353 aa15.75■□□□□ 0.11
NUDCD3-211ENST00000497978 FCHSD2O94868 740 aa15.74■□□□□ 0.11
NUDCD3-211ENST00000497978 STARD3NLO95772 234 aa15.74■□□□□ 0.11
NUDCD3-211ENST00000497978 PRKAR2BP31323 418 aa15.74■□□□□ 0.11
NUDCD3-211ENST00000497978 USPL1Q5W0Q7 1092 aa15.74■□□□□ 0.11
NUDCD3-211ENST00000497978 KIAA1551Q9HCM1 1747 aa15.74■□□□□ 0.11
NUDCD3-211ENST00000497978 COL15A1P39059 1388 aa15.74■□□□□ 0.11
NUDCD3-211ENST00000497978 DDR1Q08345 913 aa15.73■□□□□ 0.11
NUDCD3-211ENST00000497978 IL17REQ8NFR9 667 aa15.73■□□□□ 0.11
NUDCD3-211ENST00000497978 ZNF526Q8TF50 670 aaPredicted RBP15.73■□□□□ 0.11
NUDCD3-211ENST00000497978 TEX13AQ9BXU3 409 aaPredicted RBP15.73■□□□□ 0.11
NUDCD3-211ENST00000497978 SPINK5Q9NQ38 1064 aaPredicted RBP15.73■□□□□ 0.11
NUDCD3-211ENST00000497978 PIM2Q9P1W9 311 aa15.73■□□□□ 0.11
NUDCD3-211ENST00000497978 NARFQ9UHQ1 456 aa15.73■□□□□ 0.11
NUDCD3-211ENST00000497978 ZBTB1Q9Y2K1 713 aa15.73■□□□□ 0.11
NUDCD3-211ENST00000497978 UBR2Q8IWV8 1755 aa15.72■□□□□ 0.11
NUDCD3-211ENST00000497978 POLRMTO00411 1230 aaKnown RBP15.72■□□□□ 0.11
NUDCD3-211ENST00000497978 U2AF1L5P0DN76 240 aaPredicted RBP15.72■□□□□ 0.11
NUDCD3-211ENST00000497978 CANXP27824 592 aaKnown RBP15.72■□□□□ 0.11
NUDCD3-211ENST00000497978 PPP2R1AP30153 589 aa15.72■□□□□ 0.11
NUDCD3-211ENST00000497978 TM4SF1P30408 202 aa15.72■□□□□ 0.11
NUDCD3-211ENST00000497978 U2AF1Q01081 240 aaKnown RBP eCLIP15.72■□□□□ 0.11
NUDCD3-211ENST00000497978 ZNF790Q6PG37 636 aa15.72■□□□□ 0.11
NUDCD3-211ENST00000497978 ARHGAP27Q6ZUM4 889 aa15.72■□□□□ 0.11
NUDCD3-211ENST00000497978 RSPH6AQ9H0K4 717 aa15.72■□□□□ 0.11
NUDCD3-211ENST00000497978 ZNF219Q9P2Y4 722 aaPredicted RBP15.72■□□□□ 0.11
NUDCD3-211ENST00000497978 A0A087WZG4 1122 aa15.71■□□□□ 0.11
NUDCD3-211ENST00000497978 ZNF496Q96IT1 587 aaPredicted RBP15.71■□□□□ 0.11
NUDCD3-211ENST00000497978 PHACTR3Q96KR7 559 aa15.71■□□□□ 0.11
NUDCD3-211ENST00000497978 KCNA3P22001 575 aa15.7■□□□□ 0.1
NUDCD3-211ENST00000497978 DALRD3Q5D0E6 543 aaKnown RBP15.7■□□□□ 0.1
NUDCD3-211ENST00000497978 RTF1Q92541 710 aaKnown RBP15.7■□□□□ 0.1
NUDCD3-211ENST00000497978 FMNL2Q96PY5 1086 aa15.7■□□□□ 0.1
NUDCD3-211ENST00000497978 HEG1Q9ULI3 1381 aa15.7■□□□□ 0.1
NUDCD3-211ENST00000497978 BTBD11A6QL63 1104 aa15.69■□□□□ 0.1
NUDCD3-211ENST00000497978 NFIXQ14938 502 aa15.69■□□□□ 0.1
NUDCD3-211ENST00000497978 NPM2Q86SE8 214 aaKnown RBP15.69■□□□□ 0.1
NUDCD3-211ENST00000497978 CEMIPQ8WUJ3 1361 aa15.69■□□□□ 0.1
NUDCD3-211ENST00000497978 BRCA1P38398 1863 aaKnown RBP15.69■□□□□ 0.1
NUDCD3-211ENST00000497978 SIPA1L3O60292 1781 aaPredicted RBP15.68■□□□□ 0.1
NUDCD3-211ENST00000497978 CAPN15O75808 1086 aa15.68■□□□□ 0.1
NUDCD3-211ENST00000497978 EIF5P55010 431 aaKnown RBP15.68■□□□□ 0.1
NUDCD3-211ENST00000497978 ARFGEF1Q9Y6D6 1849 aa15.67■□□□□ 0.1
NUDCD3-211ENST00000497978 SERPINB2P05120 415 aa15.67■□□□□ 0.1
NUDCD3-211ENST00000497978 CHRNA5P30532 468 aa15.67■□□□□ 0.1
NUDCD3-211ENST00000497978 ZNF330Q9Y3S2 320 aaPredicted RBP15.67■□□□□ 0.1
NUDCD3-211ENST00000497978 NEFMP07197 916 aa15.66■□□□□ 0.1
NUDCD3-211ENST00000497978 BCL2L12Q9HB09 334 aa15.66■□□□□ 0.1
NUDCD3-211ENST00000497978 IL6STP40189 918 aaPredicted RBP15.65■□□□□ 0.1
NUDCD3-211ENST00000497978 BICDL1Q6ZP65 573 aa15.65■□□□□ 0.1
NUDCD3-211ENST00000497978 AFDNP55196 1824 aaKnown RBP15.64■□□□□ 0.09
NUDCD3-211ENST00000497978 HTATSF1O43719 755 aaKnown RBP15.64■□□□□ 0.09
NUDCD3-211ENST00000497978 MCM10Q7L590 875 aa15.64■□□□□ 0.09
NUDCD3-211ENST00000497978 NRXN2Q9P2S2 1712 aa15.63■□□□□ 0.09
NUDCD3-211ENST00000497978 KCNQ3O43525 872 aa15.63■□□□□ 0.09
NUDCD3-211ENST00000497978 A1BGP04217 495 aa15.63■□□□□ 0.09
NUDCD3-211ENST00000497978 C9orf131Q5VYM1 1079 aa15.63■□□□□ 0.09
NUDCD3-211ENST00000497978 TBC1D2BQ9UPU7 963 aa15.63■□□□□ 0.09
NUDCD3-211ENST00000497978 H0YIN7 160 aa15.62■□□□□ 0.09
NUDCD3-211ENST00000497978 SNRPA1P09661 255 aaKnown RBP15.62■□□□□ 0.09
NUDCD3-211ENST00000497978 C2CD5Q86YS7 1000 aa15.62■□□□□ 0.09
NUDCD3-211ENST00000497978 KIF3CO14782 793 aa15.61■□□□□ 0.09
NUDCD3-211ENST00000497978 TBC1D9BQ66K14 1250 aa15.61■□□□□ 0.09
NUDCD3-211ENST00000497978 RNF181Q9P0P0 153 aa15.61■□□□□ 0.09
NUDCD3-211ENST00000497978 NPHP1O15259 732 aa15.6■□□□□ 0.09
NUDCD3-211ENST00000497978 HSPA6P17066 643 aa15.6■□□□□ 0.09
NUDCD3-211ENST00000497978 DCTN1Q14203 1278 aa15.6■□□□□ 0.09
NUDCD3-211ENST00000497978 DZIP3Q86Y13 1208 aaKnown RBP15.6■□□□□ 0.09
NUDCD3-211ENST00000497978 TTLL6Q8N841 843 aa15.6■□□□□ 0.09
NUDCD3-211ENST00000497978 SETDB2Q96T68 719 aa15.6■□□□□ 0.09
NUDCD3-211ENST00000497978 PNNQ9H307 717 aaKnown RBP15.6■□□□□ 0.09
NUDCD3-211ENST00000497978 PDZRN3Q9UPQ7 1066 aa15.6■□□□□ 0.09
NUDCD3-211ENST00000497978 USP16Q9Y5T5 823 aa15.6■□□□□ 0.09
NUDCD3-211ENST00000497978 SCN7AQ01118 1682 aa15.6■□□□□ 0.09
NUDCD3-211ENST00000497978 CARMIL3Q8ND23 1372 aa15.6■□□□□ 0.09
NUDCD3-211ENST00000497978 PDE6BP35913 854 aa15.59■□□□□ 0.09
NUDCD3-211ENST00000497978 TAF7Q15545 349 aaPredicted RBP15.59■□□□□ 0.09
NUDCD3-211ENST00000497978 DLEC1Q9Y238 1755 aa15.58■□□□□ 0.08
NUDCD3-211ENST00000497978 CAMTA2O94983 1202 aa15.58■□□□□ 0.08
NUDCD3-211ENST00000497978 BRIP1Q9BX63 1249 aa15.58■□□□□ 0.08
NUDCD3-211ENST00000497978 KDM2BQ8NHM5 1336 aa15.58■□□□□ 0.08
NUDCD3-211ENST00000497978 PRAMEF22A3QJZ6 481 aa15.57■□□□□ 0.08
NUDCD3-211ENST00000497978 TOMM70O94826 608 aa15.57■□□□□ 0.08
NUDCD3-211ENST00000497978 C16orf71Q8IYS4 520 aaPredicted RBP15.57■□□□□ 0.08
NUDCD3-211ENST00000497978 CNBD1Q8NA66 436 aa15.57■□□□□ 0.08
NUDCD3-211ENST00000497978 PNISRQ8TF01 805 aaKnown RBP15.57■□□□□ 0.08
NUDCD3-211ENST00000497978 ZNF622Q969S3 477 aaKnown RBP eCLIP15.57■□□□□ 0.084e-11■□□□□ 11.1
NUDCD3-211ENST00000497978 NMRK2Q9NPI5 230 aa15.57■□□□□ 0.08
NUDCD3-211ENST00000497978 ZNF652Q9Y2D9 606 aa15.57■□□□□ 0.08
NUDCD3-211ENST00000497978 PIP4K2AP48426 406 aaPredicted RBP15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms