RNA–Protein interactions for RNA: ENST00000497597.5

TRAPPC12-223, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 3,401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-223ENST00000497597 LIMCH1Q9UPQ0 1083 aa12.56□□□□□ -0.4
TRAPPC12-223ENST00000497597 NOS1P29475 1434 aa12.56□□□□□ -0.4
TRAPPC12-223ENST00000497597 CCDC144BQ3MJ40 725 aa12.56□□□□□ -0.4
TRAPPC12-223ENST00000497597 CCDC144CPQ8IYA2 1237 aa12.56□□□□□ -0.4
TRAPPC12-223ENST00000497597 ZCCHC17Q9NP64 241 aaKnown RBP12.56□□□□□ -0.4
TRAPPC12-223ENST00000497597 IL16Q14005 1332 aa12.56□□□□□ -0.4
TRAPPC12-223ENST00000497597 ITSN2Q9NZM3 1697 aa12.56□□□□□ -0.4
TRAPPC12-223ENST00000497597 EIF2AK4Q9P2K8 1649 aaKnown RBP12.56□□□□□ -0.4
TRAPPC12-223ENST00000497597 CCDC69A6NI79 296 aa12.56□□□□□ -0.4
TRAPPC12-223ENST00000497597 CTIFO43310 598 aaKnown RBP12.56□□□□□ -0.4
TRAPPC12-223ENST00000497597 SLU7O95391 586 aaKnown RBP12.56□□□□□ -0.4
TRAPPC12-223ENST00000497597 LARGE1O95461 756 aa12.56□□□□□ -0.4
TRAPPC12-223ENST00000497597 ZNF75DP51815 510 aa12.56□□□□□ -0.4
TRAPPC12-223ENST00000497597 GYS2P54840 703 aa12.56□□□□□ -0.4
TRAPPC12-223ENST00000497597 CUL4AQ13619 759 aa12.56□□□□□ -0.4
TRAPPC12-223ENST00000497597 UBXN4Q92575 508 aa12.56□□□□□ -0.4
TRAPPC12-223ENST00000497597 ZSWIM4Q9H7M6 989 aa12.56□□□□□ -0.4
TRAPPC12-223ENST00000497597 H3BQV1 296 aa12.55□□□□□ -0.4
TRAPPC12-223ENST00000497597 LMAN1P49257 510 aa12.55□□□□□ -0.4
TRAPPC12-223ENST00000497597 BMS1Q14692 1282 aaKnown RBP12.55□□□□□ -0.4
TRAPPC12-223ENST00000497597 IFFO2Q5TF58 517 aa12.55□□□□□ -0.4
TRAPPC12-223ENST00000497597 TMCO3Q6UWJ1 677 aa12.55□□□□□ -0.4
TRAPPC12-223ENST00000497597 ATP10BO94823 1461 aa12.55□□□□□ -0.4
TRAPPC12-223ENST00000497597 URI1O94763 535 aaPredicted RBP12.55□□□□□ -0.4
TRAPPC12-223ENST00000497597 CCDC191Q8NCU4 936 aa12.55□□□□□ -0.4
TRAPPC12-223ENST00000497597 PDRG1Q9NUG6 133 aa12.55□□□□□ -0.4
TRAPPC12-223ENST00000497597 CCDC9Q9Y3X0 531 aaKnown RBP12.55□□□□□ -0.4
TRAPPC12-223ENST00000497597 MSH6P52701 1360 aa12.55□□□□□ -0.4
TRAPPC12-223ENST00000497597 SYCP2Q9BX26 1530 aa12.55□□□□□ -0.4
TRAPPC12-223ENST00000497597 TTC6Q86TZ1 520 aa12.55□□□□□ -0.4
TRAPPC12-223ENST00000497597 ARHGAP45Q92619 1136 aa12.55□□□□□ -0.4
TRAPPC12-223ENST00000497597 ZNF518AQ6AHZ1 1483 aa12.54□□□□□ -0.4
TRAPPC12-223ENST00000497597 GNAI2P04899 355 aa12.54□□□□□ -0.4
TRAPPC12-223ENST00000497597 G2E3Q7L622 706 aa12.54□□□□□ -0.4
TRAPPC12-223ENST00000497597 STK31Q9BXU1 1019 aa12.54□□□□□ -0.4
TRAPPC12-223ENST00000497597 LRRFIP2Q9Y608 721 aaKnown RBP12.54□□□□□ -0.4
TRAPPC12-223ENST00000497597 MRVI1Q9Y6F6 885 aa12.54□□□□□ -0.4
TRAPPC12-223ENST00000497597 ANKRD65E5RJM6 399 aa12.54□□□□□ -0.4
TRAPPC12-223ENST00000497597 NRDCO43847 1150 aa12.54□□□□□ -0.4
TRAPPC12-223ENST00000497597 SEC31AO94979 1220 aaKnown RBP12.54□□□□□ -0.4
TRAPPC12-223ENST00000497597 RASEFQ8IZ41 740 aa12.54□□□□□ -0.4
TRAPPC12-223ENST00000497597 ZRANB1Q9UGI0 708 aa12.54□□□□□ -0.4
TRAPPC12-223ENST00000497597 TRIM66O15016 1216 aa12.53□□□□□ -0.4
TRAPPC12-223ENST00000497597 GPS2Q13227 327 aa12.53□□□□□ -0.4
TRAPPC12-223ENST00000497597 SNW1Q13573 536 aaKnown RBP12.53□□□□□ -0.4
TRAPPC12-223ENST00000497597 IL25Q9H293 177 aa12.53□□□□□ -0.4
TRAPPC12-223ENST00000497597 EPC1Q9H2F5 836 aa12.53□□□□□ -0.4
TRAPPC12-223ENST00000497597 MORC2Q9Y6X9 1032 aaPredicted RBP12.53□□□□□ -0.4
TRAPPC12-223ENST00000497597 ABCC4O15439 1325 aa12.53□□□□□ -0.4
TRAPPC12-223ENST00000497597 ISM2Q6H9L7 571 aa12.53□□□□□ -0.4
TRAPPC12-223ENST00000497597 ARGLU1Q9NWB6 273 aaPredicted RBP12.53□□□□□ -0.4
TRAPPC12-223ENST00000497597 DNAI1Q9UI46 699 aa12.53□□□□□ -0.4
TRAPPC12-223ENST00000497597 RAD51AP2Q09MP3 1159 aa12.52□□□□□ -0.4
TRAPPC12-223ENST00000497597 PRAM1Q96QH2 718 aa12.52□□□□□ -0.4
TRAPPC12-223ENST00000497597 PLXNC1O60486 1568 aa12.52□□□□□ -0.4
TRAPPC12-223ENST00000497597 BIN1O00499 593 aa12.52□□□□□ -0.41
TRAPPC12-223ENST00000497597 LMOD3Q0VAK6 560 aa12.52□□□□□ -0.41
TRAPPC12-223ENST00000497597 SULT6B1Q6IMI4 303 aa12.52□□□□□ -0.41
TRAPPC12-223ENST00000497597 RUFY3Q7L099 469 aa12.52□□□□□ -0.41
TRAPPC12-223ENST00000497597 CDC37L1Q7L3B6 337 aa12.52□□□□□ -0.41
TRAPPC12-223ENST00000497597 LRRN4CLQ8ND94 238 aa12.52□□□□□ -0.41
TRAPPC12-223ENST00000497597 RBM6P78332 1123 aaKnown RBP12.52□□□□□ -0.41
TRAPPC12-223ENST00000497597 PTPN21Q16825 1174 aa12.52□□□□□ -0.41
TRAPPC12-223ENST00000497597 SDF4Q9BRK5 362 aa12.52□□□□□ -0.41
TRAPPC12-223ENST00000497597 SHANK2Q9UPX8 1470 aa12.51□□□□□ -0.41
TRAPPC12-223ENST00000497597 PNMA6EA0A0J9YXQ4 647 aa12.51□□□□□ -0.41
TRAPPC12-223ENST00000497597 APPP05067 770 aa12.51□□□□□ -0.41
TRAPPC12-223ENST00000497597 GTF2A1P52655 376 aaPredicted RBP12.51□□□□□ -0.41
TRAPPC12-223ENST00000497597 CYP46A1Q9Y6A2 500 aa12.51□□□□□ -0.41
TRAPPC12-223ENST00000497597 GUCY1B3Q02153 619 aa12.51□□□□□ -0.41
TRAPPC12-223ENST00000497597 ERO1AQ96HE7 468 aa12.51□□□□□ -0.41
TRAPPC12-223ENST00000497597 TSPYL4Q9UJ04 414 aa12.51□□□□□ -0.41
TRAPPC12-223ENST00000497597 MTMR6Q9Y217 621 aa12.51□□□□□ -0.41
TRAPPC12-223ENST00000497597 SNX14Q9Y5W7 946 aa12.51□□□□□ -0.41
TRAPPC12-223ENST00000497597 RAD50Q92878 1312 aa12.51□□□□□ -0.41
TRAPPC12-223ENST00000497597 ZKSCAN1P17029 563 aaPredicted RBP12.5□□□□□ -0.41
TRAPPC12-223ENST00000497597 TMC6Q7Z403 805 aa12.5□□□□□ -0.41
TRAPPC12-223ENST00000497597 SECISBP2LQ93073 1101 aaKnown RBP12.5□□□□□ -0.41
TRAPPC12-223ENST00000497597 RASSF4Q9H2L5 321 aa12.5□□□□□ -0.41
TRAPPC12-223ENST00000497597 ABCA9Q8IUA7 1624 aa12.5□□□□□ -0.41
TRAPPC12-223ENST00000497597 NR1I2O75469 434 aa12.5□□□□□ -0.41
TRAPPC12-223ENST00000497597 TPM4P67936 248 aa12.5□□□□□ -0.41
TRAPPC12-223ENST00000497597 CFAP74Q9C0B2 1584 aa12.5□□□□□ -0.41
TRAPPC12-223ENST00000497597 RAB11FIP3O75154 756 aa12.5□□□□□ -0.41
TRAPPC12-223ENST00000497597 ABCC10Q5T3U5 1492 aa12.5□□□□□ -0.41
TRAPPC12-223ENST00000497597 EIF2S2P20042 333 aaKnown RBP12.49□□□□□ -0.41
TRAPPC12-223ENST00000497597 CLCN6P51797 869 aa12.49□□□□□ -0.41
TRAPPC12-223ENST00000497597 HSP90AA4PQ58FG1 418 aa12.49□□□□□ -0.41
TRAPPC12-223ENST00000497597 FEZ2Q9UHY8 353 aaPredicted RBP12.49□□□□□ -0.41
TRAPPC12-223ENST00000497597 IQSEC2Q5JU85 1478 aa12.49□□□□□ -0.41
TRAPPC12-223ENST00000497597 CCDC73Q6ZRK6 1079 aa12.49□□□□□ -0.41
TRAPPC12-223ENST00000497597 AOPEPQ8N6M6 819 aa12.49□□□□□ -0.41
TRAPPC12-223ENST00000497597 A0A1W2PP64 1363 aa12.49□□□□□ -0.41
TRAPPC12-223ENST00000497597 ST5P78524 1137 aa12.49□□□□□ -0.41
TRAPPC12-223ENST00000497597 SIL1Q9H173 461 aa12.49□□□□□ -0.41
TRAPPC12-223ENST00000497597 KDM5AP29375 1690 aaKnown RBP12.49□□□□□ -0.41
TRAPPC12-223ENST00000497597 PHACTR2O75167 634 aa12.48□□□□□ -0.41
TRAPPC12-223ENST00000497597 IBSPP21815 317 aaPredicted RBP12.48□□□□□ -0.41
TRAPPC12-223ENST00000497597 ANAPC15P60006 121 aa12.48□□□□□ -0.41
TRAPPC12-223ENST00000497597 TTLL5Q6EMB2 1281 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms