RNA–Protein interactions for RNA: ENST00000497498.1

CBX3-208, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-208ENST00000497498 HDGFL1Q5TGJ6 251 aa7.95□□□□□ -1.14
CBX3-208ENST00000497498 DEPDC4Q8N2C3 294 aa7.95□□□□□ -1.14
CBX3-208ENST00000497498 BEND7Q8N7W2 519 aaPredicted RBP7.95□□□□□ -1.14
CBX3-208ENST00000497498 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.95□□□□□ -1.14
CBX3-208ENST00000497498 ZNF358Q9NW07 568 aa7.95□□□□□ -1.14
CBX3-208ENST00000497498 SCHIP1Q9P0W5 487 aaPredicted RBP7.95□□□□□ -1.14
CBX3-208ENST00000497498 GDF2Q9UK05 429 aaPredicted RBP7.95□□□□□ -1.14
CBX3-208ENST00000497498 A0A1W2PNR3 127 aa7.94□□□□□ -1.14
CBX3-208ENST00000497498 PHF20L1A8MW92 1017 aa7.94□□□□□ -1.14
CBX3-208ENST00000497498 EPHA4P54764 986 aa7.94□□□□□ -1.14
CBX3-208ENST00000497498 FOXK2Q01167 660 aa7.94□□□□□ -1.14
CBX3-208ENST00000497498 CTBSQ01459 385 aa7.94□□□□□ -1.14
CBX3-208ENST00000497498 C1orf229Q6ZS94 237 aaPredicted RBP7.94□□□□□ -1.14
CBX3-208ENST00000497498 UCN2Q96RP3 112 aa7.94□□□□□ -1.14
CBX3-208ENST00000497498 SHISA8B8ZZ34 492 aa7.93□□□□□ -1.14
CBX3-208ENST00000497498 BMP4P12644 408 aa7.93□□□□□ -1.14
CBX3-208ENST00000497498 PSME1Q06323 249 aa7.93□□□□□ -1.14
CBX3-208ENST00000497498 TRIM50Q86XT4 487 aa7.93□□□□□ -1.14
CBX3-208ENST00000497498 GOLGA6L1Q8N7Z2 621 aa7.93□□□□□ -1.14
CBX3-208ENST00000497498 CABP1Q9NZU7 370 aa7.93□□□□□ -1.14
CBX3-208ENST00000497498 USP17L3A6NCW0 530 aa7.92□□□□□ -1.14
CBX3-208ENST00000497498 USP17L4A6NCW7 530 aa7.92□□□□□ -1.14
CBX3-208ENST00000497498 ZBTB7BO15156 539 aaPredicted RBP7.92□□□□□ -1.14
CBX3-208ENST00000497498 ATXN7O15265 892 aaPredicted RBP7.92□□□□□ -1.14
CBX3-208ENST00000497498 ATP9BO43861 1147 aa7.92□□□□□ -1.14
CBX3-208ENST00000497498 TATP17735 454 aaPredicted RBP7.92□□□□□ -1.14
CBX3-208ENST00000497498 ARSJQ5FYB0 599 aaPredicted RBP7.92□□□□□ -1.14
CBX3-208ENST00000497498 USP17L2Q6R6M4 530 aa7.92□□□□□ -1.14
CBX3-208ENST00000497498 USP17L1Q7RTZ2 530 aa7.92□□□□□ -1.14
CBX3-208ENST00000497498 PODNQ7Z5L7 613 aa7.92□□□□□ -1.14
CBX3-208ENST00000497498 FNBP4Q8N3X1 1017 aaPredicted RBP7.92□□□□□ -1.14
CBX3-208ENST00000497498 GALNT6Q8NCL4 622 aa7.92□□□□□ -1.14
CBX3-208ENST00000497498 ZDHHC1Q8WTX9 485 aa7.92□□□□□ -1.14
CBX3-208ENST00000497498 ZIC5Q96T25 663 aa7.92□□□□□ -1.14
CBX3-208ENST00000497498 HCN2Q9UL51 889 aa7.92□□□□□ -1.14
CBX3-208ENST00000497498 TNP2Q05952 138 aa7.91□□□□□ -1.14
CBX3-208ENST00000497498 TEAD4Q15561 434 aa7.91□□□□□ -1.14
CBX3-208ENST00000497498 FAM182BQ5T319 152 aa7.91□□□□□ -1.14
CBX3-208ENST00000497498 SLCO4C1Q6ZQN7 724 aa7.91□□□□□ -1.14
CBX3-208ENST00000497498 EDARADDQ8WWZ3 215 aa7.91□□□□□ -1.14
CBX3-208ENST00000497498 ARAFP10398 606 aa7.9□□□□□ -1.14
CBX3-208ENST00000497498 MAPTP10636 758 aaKnown RBP7.9□□□□□ -1.14
CBX3-208ENST00000497498 ATP1A2P50993 1020 aa7.9□□□□□ -1.14
CBX3-208ENST00000497498 SNRPNP63162 240 aaKnown RBP7.9□□□□□ -1.14
CBX3-208ENST00000497498 CLDN10P78369 228 aa7.9□□□□□ -1.14
CBX3-208ENST00000497498 SAMD5Q5TGI4 173 aa7.9□□□□□ -1.14
CBX3-208ENST00000497498 L3MBTL2Q969R5 705 aa7.9□□□□□ -1.14
CBX3-208ENST00000497498 GGA1Q9UJY5 639 aa7.9□□□□□ -1.14
CBX3-208ENST00000497498 KIAA1024Q9UPX6 916 aa7.9□□□□□ -1.14
CBX3-208ENST00000497498 PARP3Q9Y6F1 533 aa7.9□□□□□ -1.14
CBX3-208ENST00000497498 IGHA1P01876 353 aa7.89□□□□□ -1.15
CBX3-208ENST00000497498 FAM157BP0CG42 384 aa7.89□□□□□ -1.15
CBX3-208ENST00000497498 NOS2P35228 1153 aa7.89□□□□□ -1.15
CBX3-208ENST00000497498 TXLNAP40222 546 aa7.89□□□□□ -1.15
CBX3-208ENST00000497498 CCDC102BQ68D86 513 aa7.89□□□□□ -1.15
CBX3-208ENST00000497498 SLC9A9Q8IVB4 645 aa7.89□□□□□ -1.15
CBX3-208ENST00000497498 TNS4Q8IZW8 715 aa7.89□□□□□ -1.15
CBX3-208ENST00000497498 LARGE2Q8N3Y3 721 aa7.89□□□□□ -1.15
CBX3-208ENST00000497498 TPCN2Q8NHX9 752 aa7.89□□□□□ -1.15
CBX3-208ENST00000497498 C7orf43Q8WVR3 580 aa7.89□□□□□ -1.15
CBX3-208ENST00000497498 CLUAP1Q96AJ1 413 aa7.89□□□□□ -1.15
CBX3-208ENST00000497498 DCAF5Q96JK2 942 aa7.89□□□□□ -1.15
CBX3-208ENST00000497498 EML1O00423 815 aa7.88□□□□□ -1.15
CBX3-208ENST00000497498 HOXB4P17483 251 aaPredicted RBP7.88□□□□□ -1.15
CBX3-208ENST00000497498 GPAT2Q6NUI2 795 aa7.88□□□□□ -1.15
CBX3-208ENST00000497498 PROSER2Q86WR7 435 aaPredicted RBP7.88□□□□□ -1.15
CBX3-208ENST00000497498 MKRN1Q9UHC7 482 aaKnown RBP7.88□□□□□ -1.15
CBX3-208ENST00000497498 DCDC2BA2VCK2 349 aa7.87□□□□□ -1.15
CBX3-208ENST00000497498 PALM3A6NDB9 673 aaPredicted RBP7.87□□□□□ -1.15
CBX3-208ENST00000497498 M0R2N6 131 aa7.87□□□□□ -1.15
CBX3-208ENST00000497498 EFSO43281 561 aa7.87□□□□□ -1.15
CBX3-208ENST00000497498 EPXP11678 715 aa7.87□□□□□ -1.15
CBX3-208ENST00000497498 OGFOD1Q8N543 542 aa7.87□□□□□ -1.15
CBX3-208ENST00000497498 AVENQ9NQS1 362 aaPredicted RBP7.87□□□□□ -1.15
CBX3-208ENST00000497498 GPC6Q9Y625 555 aaPredicted RBP7.87□□□□□ -1.15
CBX3-208ENST00000497498 KHNYNO15037 678 aaKnown RBP7.86□□□□□ -1.15
CBX3-208ENST00000497498 DKK1O94907 266 aa7.86□□□□□ -1.15
CBX3-208ENST00000497498 CD33P20138 364 aa7.86□□□□□ -1.15
CBX3-208ENST00000497498 TBCELQ5QJ74 424 aa7.86□□□□□ -1.15
CBX3-208ENST00000497498 POTEAQ6S8J7 498 aa7.86□□□□□ -1.15
CBX3-208ENST00000497498 BICDL1Q6ZP65 573 aa7.86□□□□□ -1.15
CBX3-208ENST00000497498 SIX5Q8N196 739 aa7.86□□□□□ -1.15
CBX3-208ENST00000497498 GLMNQ92990 594 aa7.86□□□□□ -1.15
CBX3-208ENST00000497498 KLF15Q9UIH9 416 aa7.86□□□□□ -1.15
CBX3-208ENST00000497498 MKL2Q9ULH7 1088 aa7.86□□□□□ -1.15
CBX3-208ENST00000497498 GJA3Q9Y6H8 435 aa7.86□□□□□ -1.15
CBX3-208ENST00000497498 SERTM1A2A2V5 107 aa7.85□□□□□ -1.15
CBX3-208ENST00000497498 ITGB2P05107 769 aa7.85□□□□□ -1.15
CBX3-208ENST00000497498 LAMC2Q13753 1193 aa7.85□□□□□ -1.15
CBX3-208ENST00000497498 PLA2G4EQ3MJ16 856 aa7.85□□□□□ -1.15
CBX3-208ENST00000497498 LINC00114Q6XXX2 140 aa7.85□□□□□ -1.15
CBX3-208ENST00000497498 BTBD6Q96KE9 485 aa7.85□□□□□ -1.15
CBX3-208ENST00000497498 ZNF232Q9UNY5 417 aa7.85□□□□□ -1.15
CBX3-208ENST00000497498 A6NJR5 290 aa7.84□□□□□ -1.15
CBX3-208ENST00000497498 NEURL1BA8MQ27 555 aa7.84□□□□□ -1.15
CBX3-208ENST00000497498 ADH6P28332 368 aa7.84□□□□□ -1.15
CBX3-208ENST00000497498 HIRAP54198 1017 aaPredicted RBP7.84□□□□□ -1.15
CBX3-208ENST00000497498 TSPAN10Q9H1Z9 355 aaPredicted RBP7.84□□□□□ -1.15
CBX3-208ENST00000497498 RRAGCQ9HB90 399 aa7.84□□□□□ -1.15
CBX3-208ENST00000497498 STRN4Q9NRL3 753 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms