RNA–Protein interactions for RNA: ENST00000497380.1

USP13-205, Transcript of ubiquitin specific peptidase 13, humanhuman

TSL 3

Gene USP13, Length 509 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP13-205ENST00000497380 DEFB132Q7Z7B7 95 aa13.39□□□□□ -0.27
USP13-205ENST00000497380 DNAJC10Q8IXB1 793 aa13.39□□□□□ -0.27
USP13-205ENST00000497380 SSH1Q8WYL5 1049 aa13.39□□□□□ -0.27
USP13-205ENST00000497380 DDX21Q9NR30 783 aaKnown RBP eCLIP13.39□□□□□ -0.27
USP13-205ENST00000497380 ZNF831Q5JPB2 1677 aa13.38□□□□□ -0.27
USP13-205ENST00000497380 MS4A1P11836 297 aa13.38□□□□□ -0.27
USP13-205ENST00000497380 CANXP27824 592 aaKnown RBP13.38□□□□□ -0.27
USP13-205ENST00000497380 BAG6P46379 1132 aa13.38□□□□□ -0.27
USP13-205ENST00000497380 PRAMEF22A3QJZ6 481 aa13.37□□□□□ -0.27
USP13-205ENST00000497380 CYP19A1P11511 503 aaPredicted RBP13.37□□□□□ -0.27
USP13-205ENST00000497380 RC3H1Q5TC82 1133 aaKnown RBP13.37□□□□□ -0.27
USP13-205ENST00000497380 MRPL50Q8N5N7 158 aaKnown RBP13.37□□□□□ -0.27
USP13-205ENST00000497380 NECTIN2Q92692 538 aa13.37□□□□□ -0.27
USP13-205ENST00000497380 SLC4A9Q96Q91 983 aa13.37□□□□□ -0.27
USP13-205ENST00000497380 BCAR3O75815 825 aa13.36□□□□□ -0.27
USP13-205ENST00000497380 DDX58O95786 925 aaKnown RBP13.36□□□□□ -0.27
USP13-205ENST00000497380 TXNRD1Q16881 649 aa13.36□□□□□ -0.27
USP13-205ENST00000497380 ARHGAP45Q92619 1136 aa13.36□□□□□ -0.27
USP13-205ENST00000497380 BCL2L13Q9BXK5 485 aa13.36□□□□□ -0.27
USP13-205ENST00000497380 CCDC87Q9NVE4 849 aa13.36□□□□□ -0.27
USP13-205ENST00000497380 CHPF2Q9P2E5 772 aa13.36□□□□□ -0.27
USP13-205ENST00000497380 CACNA1FO60840 1977 aa13.36□□□□□ -0.27
USP13-205ENST00000497380 PTPRCP08575 1304 aa13.36□□□□□ -0.27
USP13-205ENST00000497380 CICQ96RK0 1608 aaPredicted RBP13.35□□□□□ -0.27
USP13-205ENST00000497380 LAMB4A4D0S4 1761 aa13.35□□□□□ -0.27
USP13-205ENST00000497380 ITPK1Q13572 414 aa13.35□□□□□ -0.27
USP13-205ENST00000497380 ZKSCAN2Q63HK3 967 aa13.35□□□□□ -0.27
USP13-205ENST00000497380 FRAT1Q92837 279 aaPredicted RBP13.35□□□□□ -0.27
USP13-205ENST00000497380 API5Q9BZZ5 524 aaKnown RBP13.35□□□□□ -0.27
USP13-205ENST00000497380 SUPT16HQ9Y5B9 1047 aaKnown RBP13.35□□□□□ -0.27
USP13-205ENST00000497380 LY75O60449 1722 aa13.35□□□□□ -0.27
USP13-205ENST00000497380 CNTNAP4Q9C0A0 1308 aa13.35□□□□□ -0.27
USP13-205ENST00000497380 TCERG1O14776 1098 aaKnown RBP13.34□□□□□ -0.27
USP13-205ENST00000497380 A1BGP04217 495 aa13.34□□□□□ -0.27
USP13-205ENST00000497380 MYL6BP14649 208 aa13.34□□□□□ -0.27
USP13-205ENST00000497380 IL6STP40189 918 aaPredicted RBP13.34□□□□□ -0.27
USP13-205ENST00000497380 CRKLP46109 303 aaKnown RBP13.34□□□□□ -0.27
USP13-205ENST00000497380 NOB1Q9ULX3 412 aaKnown RBP13.34□□□□□ -0.27
USP13-205ENST00000497380 A0A087WZG4 1122 aa13.33□□□□□ -0.28
USP13-205ENST00000497380 PSDA5PKW4 1024 aaPredicted RBP13.33□□□□□ -0.28
USP13-205ENST00000497380 RRP1P56182 461 aaKnown RBP13.33□□□□□ -0.28
USP13-205ENST00000497380 FLIIQ13045 1269 aa13.33□□□□□ -0.28
USP13-205ENST00000497380 PDIA6Q15084 440 aa13.33□□□□□ -0.28
USP13-205ENST00000497380 C5P01031 1676 aa13.33□□□□□ -0.28
USP13-205ENST00000497380 RGPD3A6NKT7 1758 aaPredicted RBP13.32□□□□□ -0.28
USP13-205ENST00000497380 RGPD4Q7Z3J3 1758 aa13.32□□□□□ -0.28
USP13-205ENST00000497380 YY1P25490 414 aa13.32□□□□□ -0.28
USP13-205ENST00000497380 FKBP5Q13451 457 aaPredicted RBP13.32□□□□□ -0.28
USP13-205ENST00000497380 INTS5Q6P9B9 1019 aaKnown RBP13.32□□□□□ -0.28
USP13-205ENST00000497380 ATF7IPQ6VMQ6 1270 aa13.32□□□□□ -0.28
USP13-205ENST00000497380 LINC00116Q8NCU8 138 aa13.32□□□□□ -0.28
USP13-205ENST00000497380 AK7Q96M32 723 aa13.32□□□□□ -0.28
USP13-205ENST00000497380 CAMKK2Q96RR4 588 aa13.32□□□□□ -0.28
USP13-205ENST00000497380 RTCBQ9Y3I0 505 aaKnown RBP13.32□□□□□ -0.28
USP13-205ENST00000497380 TJP1Q07157 1748 aa13.32□□□□□ -0.28
USP13-205ENST00000497380 TNS1Q9HBL0 1735 aaKnown RBP13.32□□□□□ -0.28
USP13-205ENST00000497380 RNF123Q5XPI4 1314 aa13.32□□□□□ -0.28
USP13-205ENST00000497380 NBPF26B4DH59 902 aa13.31□□□□□ -0.28
USP13-205ENST00000497380 RPS6KA4O75676 772 aa13.31□□□□□ -0.28
USP13-205ENST00000497380 NEFLP07196 543 aa13.31□□□□□ -0.28
USP13-205ENST00000497380 EN1Q05925 392 aaPredicted RBP13.31□□□□□ -0.28
USP13-205ENST00000497380 PDE3AQ14432 1141 aa13.31□□□□□ -0.28
USP13-205ENST00000497380 NBPF14Q5TI25 921 aa13.31□□□□□ -0.28
USP13-205ENST00000497380 NBPF10Q6P3W6 841 aaKnown RBP13.31□□□□□ -0.28
USP13-205ENST00000497380 KIF6Q6ZMV9 814 aa13.31□□□□□ -0.28
USP13-205ENST00000497380 COPS6Q7L5N1 327 aa13.31□□□□□ -0.28
USP13-205ENST00000497380 FTSJ3Q8IY81 847 aaKnown RBP13.31□□□□□ -0.28
USP13-205ENST00000497380 NBPF15Q8N660 670 aa13.31□□□□□ -0.28
USP13-205ENST00000497380 PHAXQ9H814 394 aaKnown RBP13.31□□□□□ -0.28
USP13-205ENST00000497380 LRRC4BQ9NT99 713 aa13.31□□□□□ -0.28
USP13-205ENST00000497380 ZBTB1Q9Y2K1 713 aa13.31□□□□□ -0.28
USP13-205ENST00000497380 ZNF330Q9Y3S2 320 aaPredicted RBP13.31□□□□□ -0.28
USP13-205ENST00000497380 ANXA1P04083 346 aa13.3□□□□□ -0.28
USP13-205ENST00000497380 KCNQ4P56696 695 aa13.3□□□□□ -0.28
USP13-205ENST00000497380 AIMP1Q12904 312 aaKnown RBP13.3□□□□□ -0.28
USP13-205ENST00000497380 EZH2Q15910 746 aaKnown RBP13.3□□□□□ -0.28
USP13-205ENST00000497380 KSR2Q6VAB6 950 aa13.3□□□□□ -0.28
USP13-205ENST00000497380 ANKRD13DQ6ZTN6 518 aa13.3□□□□□ -0.28
USP13-205ENST00000497380 RIC3Q7Z5B4 369 aa13.3□□□□□ -0.28
USP13-205ENST00000497380 PROM2Q8N271 834 aa13.3□□□□□ -0.28
USP13-205ENST00000497380 FLAD1Q8NFF5 587 aa13.3□□□□□ -0.28
USP13-205ENST00000497380 XAGE3Q8WTP9 111 aa13.3□□□□□ -0.28
USP13-205ENST00000497380 ADRA2BP18089 450 aa13.29□□□□□ -0.28
USP13-205ENST00000497380 EIF5P55010 431 aaKnown RBP13.29□□□□□ -0.28
USP13-205ENST00000497380 PROSER3Q2NL68 480 aa13.29□□□□□ -0.28
USP13-205ENST00000497380 G2E3Q7L622 706 aa13.29□□□□□ -0.28
USP13-205ENST00000497380 LRP10Q7Z4F1 713 aa13.29□□□□□ -0.28
USP13-205ENST00000497380 DZIP1LQ8IYY4 767 aaKnown RBP13.29□□□□□ -0.28
USP13-205ENST00000497380 ARXQ96QS3 562 aa13.29□□□□□ -0.28
USP13-205ENST00000497380 CHMP4BQ9H444 224 aaKnown RBP13.29□□□□□ -0.28
USP13-205ENST00000497380 COL5A3P25940 1745 aaPredicted RBP13.29□□□□□ -0.28
USP13-205ENST00000497380 PI4KAP2A4QPH2 592 aa13.28□□□□□ -0.28
USP13-205ENST00000497380 ERVV-1B6SEH8 477 aa13.28□□□□□ -0.28
USP13-205ENST00000497380 RGL2O15211 777 aa13.28□□□□□ -0.28
USP13-205ENST00000497380 GNPATO15228 680 aa13.28□□□□□ -0.28
USP13-205ENST00000497380 TRIM27P14373 513 aa13.28□□□□□ -0.28
USP13-205ENST00000497380 SSFA2P28290 1259 aa13.28□□□□□ -0.28
USP13-205ENST00000497380 PIP4K2AP48426 406 aaPredicted RBP13.28□□□□□ -0.28
USP13-205ENST00000497380 NEXNQ0ZGT2 675 aa13.28□□□□□ -0.28
USP13-205ENST00000497380 TRAPPC3LQ5T215 181 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms