RNA–Protein interactions for RNA: ENST00000497377.5

HLA-B-254, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 917 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-254ENST00000497377 SLC4A9Q96Q91 983 aa15.12■□□□□ 0.01
HLA-B-254ENST00000497377 MTFR1LQ9H019 292 aa15.12■□□□□ 0.01
HLA-B-254ENST00000497377 PNPLA7Q6ZV29 1317 aa15.12■□□□□ 0.01
HLA-B-254ENST00000497377 UBR3Q6ZT12 1888 aa15.12■□□□□ 0.01
HLA-B-254ENST00000497377 SLC39A6Q13433 755 aa15.11■□□□□ 0.01
HLA-B-254ENST00000497377 ZNF790Q6PG37 636 aa15.11■□□□□ 0.01
HLA-B-254ENST00000497377 MCM10Q7L590 875 aa15.11■□□□□ 0.01
HLA-B-254ENST00000497377 KCPQ6ZWJ8 1503 aa15.11■□□□□ 0.01
HLA-B-254ENST00000497377 CNTNAP4Q9C0A0 1308 aa15.11■□□□□ 0.01
HLA-B-254ENST00000497377 BTBD11A6QL63 1104 aa15.1■□□□□ 0.01
HLA-B-254ENST00000497377 SSFA2P28290 1259 aa15.1■□□□□ 0.01
HLA-B-254ENST00000497377 TMPOP42166 694 aaKnown RBP15.1■□□□□ 0.01
HLA-B-254ENST00000497377 CLCN6P51797 869 aa15.1■□□□□ 0.01
HLA-B-254ENST00000497377 PDGFDQ9GZP0 370 aaPredicted RBP15.1■□□□□ 0.01
HLA-B-254ENST00000497377 TJP1Q07157 1748 aa15.09■□□□□ 0.01
HLA-B-254ENST00000497377 RIPK4P57078 832 aa15.09■□□□□ 0.01
HLA-B-254ENST00000497377 DCTN1Q14203 1278 aa15.09■□□□□ 0.01
HLA-B-254ENST00000497377 TAF7Q15545 349 aaPredicted RBP15.09■□□□□ 0.01
HLA-B-254ENST00000497377 PNISRQ8TF01 805 aaKnown RBP15.09■□□□□ 0.01
HLA-B-254ENST00000497377 GNPATO15228 680 aa15.08■□□□□ 0
HLA-B-254ENST00000497377 ZBTB7AO95365 584 aa15.08■□□□□ 0
HLA-B-254ENST00000497377 COL23A1Q86Y22 540 aaPredicted RBP15.08■□□□□ 0
HLA-B-254ENST00000497377 CCDC146Q8IYE0 955 aa15.08■□□□□ 0
HLA-B-254ENST00000497377 TEX13AQ9BXU3 409 aaPredicted RBP15.08■□□□□ 0
HLA-B-254ENST00000497377 MRS2Q9HD23 443 aa15.08■□□□□ 0
HLA-B-254ENST00000497377 RTCBQ9Y3I0 505 aaKnown RBP15.08■□□□□ 0
HLA-B-254ENST00000497377 COL24A1Q17RW2 1714 aa15.07■□□□□ 0
HLA-B-254ENST00000497377 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.07■□□□□ 0
HLA-B-254ENST00000497377 CRKLP46109 303 aaKnown RBP15.07■□□□□ 0
HLA-B-254ENST00000497377 FMNL2Q96PY5 1086 aa15.07■□□□□ 0
HLA-B-254ENST00000497377 HEG1Q9ULI3 1381 aa15.07■□□□□ 0
HLA-B-254ENST00000497377 MYH14Q7Z406 1995 aaKnown RBP15.07■□□□□ 0
HLA-B-254ENST00000497377 RPS6KA4O75676 772 aa15.06■□□□□ 0
HLA-B-254ENST00000497377 STARD3NLO95772 234 aa15.06■□□□□ 0
HLA-B-254ENST00000497377 CCDC184Q52MB2 194 aa15.06■□□□□ 0
HLA-B-254ENST00000497377 ZNF496Q96IT1 587 aaPredicted RBP15.06■□□□□ 0
HLA-B-254ENST00000497377 CYP19A1P11511 503 aaPredicted RBP15.05■□□□□ -0
HLA-B-254ENST00000497377 DNAJC10Q8IXB1 793 aa15.05■□□□□ -0
HLA-B-254ENST00000497377 CCDC87Q9NVE4 849 aa15.05■□□□□ -0
HLA-B-254ENST00000497377 BABAM1Q9NWV8 329 aa15.05■□□□□ -0
HLA-B-254ENST00000497377 PPP1R1BQ9UD71 204 aaPredicted RBP15.05■□□□□ -0
HLA-B-254ENST00000497377 PHF14O94880 888 aa15.04■□□□□ -0
HLA-B-254ENST00000497377 POLD1P28340 1107 aa15.04■□□□□ -0
HLA-B-254ENST00000497377 PTGER2P43116 358 aa15.04■□□□□ -0
HLA-B-254ENST00000497377 TRAPPC3LQ5T215 181 aa15.04■□□□□ -0
HLA-B-254ENST00000497377 KDM3BQ7LBC6 1761 aa15.03■□□□□ -0
HLA-B-254ENST00000497377 INTS5Q6P9B9 1019 aaKnown RBP15.03■□□□□ -0
HLA-B-254ENST00000497377 AMIGO3Q86WK7 504 aa15.03■□□□□ -0
HLA-B-254ENST00000497377 ZNF579Q8NAF0 562 aaKnown RBP15.03■□□□□ -0
HLA-B-254ENST00000497377 SGIP1Q9BQI5 828 aa15.03■□□□□ -0
HLA-B-254ENST00000497377 RRP7AQ9Y3A4 280 aaKnown RBP15.03■□□□□ -0
HLA-B-254ENST00000497377 KCNQ3O43525 872 aa15.02■□□□□ -0
HLA-B-254ENST00000497377 SNRPA1P09661 255 aaKnown RBP15.02■□□□□ -0
HLA-B-254ENST00000497377 NEUROD2Q15784 382 aa15.02■□□□□ -0
HLA-B-254ENST00000497377 THUMPD2Q9BTF0 503 aaKnown RBP15.02■□□□□ -0
HLA-B-254ENST00000497377 APAF1O14727 1248 aa15.01□□□□□ -0.01
HLA-B-254ENST00000497377 RFC4P35249 363 aa15.01□□□□□ -0.01
HLA-B-254ENST00000497377 ARHGEF1Q92888 912 aaKnown RBP15.01□□□□□ -0.01
HLA-B-254ENST00000497377 TRIM35Q9UPQ4 493 aa15.01□□□□□ -0.01
HLA-B-254ENST00000497377 SOS1Q07889 1333 aaPredicted RBP15□□□□□ -0.01
HLA-B-254ENST00000497377 MNX1P50219 401 aaPredicted RBP15□□□□□ -0.01
HLA-B-254ENST00000497377 CALD1Q05682 793 aaKnown RBP15□□□□□ -0.01
HLA-B-254ENST00000497377 ARXQ96QS3 562 aa15□□□□□ -0.01
HLA-B-254ENST00000497377 C4AP0C0L4 1744 aa15□□□□□ -0.01
HLA-B-254ENST00000497377 SMIM5Q71RC9 77 aa14.99□□□□□ -0.01
HLA-B-254ENST00000497377 MIS18AQ9NYP9 233 aa14.99□□□□□ -0.01
HLA-B-254ENST00000497377 TSPYL4Q9UJ04 414 aa14.99□□□□□ -0.01
HLA-B-254ENST00000497377 EIF4A1P60842 406 aaKnown RBP14.98□□□□□ -0.01
HLA-B-254ENST00000497377 NLGN1Q8N2Q7 840 aa14.98□□□□□ -0.01
HLA-B-254ENST00000497377 ZBTB1Q9Y2K1 713 aa14.98□□□□□ -0.01
HLA-B-254ENST00000497377 LAMB4A4D0S4 1761 aa14.98□□□□□ -0.01
HLA-B-254ENST00000497377 COL15A1P39059 1388 aa14.98□□□□□ -0.01
HLA-B-254ENST00000497377 A0A087WZG4 1122 aa14.97□□□□□ -0.01
HLA-B-254ENST00000497377 CHL1O00533 1208 aa14.97□□□□□ -0.01
HLA-B-254ENST00000497377 IL6STP40189 918 aaPredicted RBP14.97□□□□□ -0.01
HLA-B-254ENST00000497377 MSL1Q68DK7 614 aa14.97□□□□□ -0.01
HLA-B-254ENST00000497377 USP42Q9H9J4 1324 aaKnown RBP14.96□□□□□ -0.01
HLA-B-254ENST00000497377 ZPR1O75312 459 aa14.96□□□□□ -0.01
HLA-B-254ENST00000497377 GIGYF1O75420 1035 aaPredicted RBP14.96□□□□□ -0.01
HLA-B-254ENST00000497377 CANXP27824 592 aaKnown RBP14.96□□□□□ -0.01
HLA-B-254ENST00000497377 EIF5P55010 431 aaKnown RBP14.96□□□□□ -0.01
HLA-B-254ENST00000497377 CCDC27Q2M243 656 aa14.96□□□□□ -0.01
HLA-B-254ENST00000497377 NPM2Q86SE8 214 aaKnown RBP14.96□□□□□ -0.01
HLA-B-254ENST00000497377 DCBLD2Q96PD2 775 aa14.96□□□□□ -0.01
HLA-B-254ENST00000497377 USP16Q9Y5T5 823 aa14.96□□□□□ -0.01
HLA-B-254ENST00000497377 CCER2I3L3R5 266 aa14.95□□□□□ -0.02
HLA-B-254ENST00000497377 GYS1P13807 737 aa14.95□□□□□ -0.02
HLA-B-254ENST00000497377 NGEFQ8N5V2 710 aa14.95□□□□□ -0.02
HLA-B-254ENST00000497377 CFAP44Q96MT7 982 aa14.95□□□□□ -0.02
HLA-B-254ENST00000497377 NARFQ9UHQ1 456 aa14.95□□□□□ -0.02
HLA-B-254ENST00000497377 A1BGP04217 495 aa14.94□□□□□ -0.02
HLA-B-254ENST00000497377 MIER1Q8N108 512 aa14.94□□□□□ -0.02
HLA-B-254ENST00000497377 FHDC1Q9C0D6 1143 aaPredicted RBP14.94□□□□□ -0.02
HLA-B-254ENST00000497377 IFT57Q9NWB7 429 aa14.94□□□□□ -0.02
HLA-B-254ENST00000497377 PRAMEF22A3QJZ6 481 aa14.93□□□□□ -0.02
HLA-B-254ENST00000497377 GNAI1P63096 354 aa14.93□□□□□ -0.02
HLA-B-254ENST00000497377 FAM9BQ8IZU0 186 aa14.93□□□□□ -0.02
HLA-B-254ENST00000497377 LAS1LQ9Y4W2 734 aaKnown RBP14.93□□□□□ -0.02
HLA-B-254ENST00000497377 ERBB4Q15303 1308 aa14.92□□□□□ -0.02
HLA-B-254ENST00000497377 MMP10P09238 476 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms