RNA–Protein interactions for RNA: ENST00000497327.1

GGPS1-208, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 3

Gene GGPS1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-208ENST00000497327 ITGB2P05107 769 aa9.24□□□□□ -0.93
GGPS1-208ENST00000497327 FGFR3P22607 806 aa9.24□□□□□ -0.93
GGPS1-208ENST00000497327 CTBSQ01459 385 aa9.24□□□□□ -0.93
GGPS1-208ENST00000497327 SUZ12Q15022 739 aaKnown RBP9.24□□□□□ -0.93
GGPS1-208ENST00000497327 ADAMTS19Q8TE59 1207 aa9.24□□□□□ -0.93
GGPS1-208ENST00000497327 EIF4G1Q04637 1599 aaKnown RBP9.24□□□□□ -0.93
GGPS1-208ENST00000497327 ATAD2BQ9ULI0 1458 aa9.23□□□□□ -0.93
GGPS1-208ENST00000497327 LOC100996750A0A140TA64 210 aa9.23□□□□□ -0.93
GGPS1-208ENST00000497327 PHF20L1A8MW92 1017 aa9.23□□□□□ -0.93
GGPS1-208ENST00000497327 SNRPNP63162 240 aaKnown RBP9.23□□□□□ -0.93
GGPS1-208ENST00000497327 EML3Q32P44 896 aa9.23□□□□□ -0.93
GGPS1-208ENST00000497327 GPAT2Q6NUI2 795 aa9.23□□□□□ -0.93
GGPS1-208ENST00000497327 BEND7Q8N7W2 519 aaPredicted RBP9.23□□□□□ -0.93
GGPS1-208ENST00000497327 DCAF5Q96JK2 942 aa9.23□□□□□ -0.93
GGPS1-208ENST00000497327 KRTAP4-6Q9BYQ5 205 aa9.23□□□□□ -0.93
GGPS1-208ENST00000497327 ZCCHC2Q9C0B9 1178 aaKnown RBP9.23□□□□□ -0.93
GGPS1-208ENST00000497327 POM121CA8CG34 1229 aa9.22□□□□□ -0.93
GGPS1-208ENST00000497327 BMP4P12644 408 aa9.22□□□□□ -0.93
GGPS1-208ENST00000497327 GTF2IP78347 998 aa9.22□□□□□ -0.93
GGPS1-208ENST00000497327 NCOA4Q13772 614 aa9.22□□□□□ -0.93
GGPS1-208ENST00000497327 NLRP8Q86W28 1048 aa9.22□□□□□ -0.93
GGPS1-208ENST00000497327 GALNT6Q8NCL4 622 aa9.22□□□□□ -0.93
GGPS1-208ENST00000497327 GDF2Q9UK05 429 aaPredicted RBP9.22□□□□□ -0.93
GGPS1-208ENST00000497327 LZTS3O60299 673 aaPredicted RBP9.21□□□□□ -0.94
GGPS1-208ENST00000497327 HOXB4P17483 251 aaPredicted RBP9.21□□□□□ -0.94
GGPS1-208ENST00000497327 FOXK2Q01167 660 aa9.21□□□□□ -0.94
GGPS1-208ENST00000497327 PODNQ7Z5L7 613 aa9.21□□□□□ -0.94
GGPS1-208ENST00000497327 AIDAQ96BJ3 306 aa9.21□□□□□ -0.94
GGPS1-208ENST00000497327 NOD1Q9Y239 953 aa9.21□□□□□ -0.94
GGPS1-208ENST00000497327 PCDHGC4Q9Y5F7 938 aa9.21□□□□□ -0.94
GGPS1-208ENST00000497327 A0A1W2PNR3 127 aa9.2□□□□□ -0.94
GGPS1-208ENST00000497327 USP17L5A8MUK1 530 aa9.2□□□□□ -0.94
GGPS1-208ENST00000497327 IGHA1P01876 353 aa9.2□□□□□ -0.94
GGPS1-208ENST00000497327 FIGNL1Q6PIW4 674 aa9.2□□□□□ -0.94
GGPS1-208ENST00000497327 SLCO4C1Q6ZQN7 724 aa9.2□□□□□ -0.94
GGPS1-208ENST00000497327 GOLGA6L1Q8N7Z2 621 aa9.2□□□□□ -0.94
GGPS1-208ENST00000497327 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.2□□□□□ -0.94
GGPS1-208ENST00000497327 EDARADDQ8WWZ3 215 aa9.2□□□□□ -0.94
GGPS1-208ENST00000497327 ZNF358Q9NW07 568 aa9.2□□□□□ -0.94
GGPS1-208ENST00000497327 ZDHHC3Q9NYG2 299 aa9.2□□□□□ -0.94
GGPS1-208ENST00000497327 ATXN7O15265 892 aaPredicted RBP9.19□□□□□ -0.94
GGPS1-208ENST00000497327 EPHA4P54764 986 aa9.19□□□□□ -0.94
GGPS1-208ENST00000497327 PLA2G4EQ3MJ16 856 aa9.19□□□□□ -0.94
GGPS1-208ENST00000497327 DEPDC4Q8N2C3 294 aa9.19□□□□□ -0.94
GGPS1-208ENST00000497327 ZDHHC1Q8WTX9 485 aa9.19□□□□□ -0.94
GGPS1-208ENST00000497327 UCN2Q96RP3 112 aa9.19□□□□□ -0.94
GGPS1-208ENST00000497327 ZIC5Q96T25 663 aa9.19□□□□□ -0.94
GGPS1-208ENST00000497327 SCHIP1Q9P0W5 487 aaPredicted RBP9.19□□□□□ -0.94
GGPS1-208ENST00000497327 GGA1Q9UJY5 639 aa9.19□□□□□ -0.94
GGPS1-208ENST00000497327 NCAPD3P42695 1498 aa9.19□□□□□ -0.94
GGPS1-208ENST00000497327 TOP2AP11388 1531 aaKnown RBP9.19□□□□□ -0.94
GGPS1-208ENST00000497327 SMARCA2P51531 1590 aa9.18□□□□□ -0.94
GGPS1-208ENST00000497327 TNP2Q05952 138 aa9.18□□□□□ -0.94
GGPS1-208ENST00000497327 FLIIQ13045 1269 aa9.18□□□□□ -0.94
GGPS1-208ENST00000497327 NBPF1Q3BBV0 1214 aa9.18□□□□□ -0.94
GGPS1-208ENST00000497327 WWC1Q8IX03 1113 aa9.18□□□□□ -0.94
GGPS1-208ENST00000497327 CABP1Q9NZU7 370 aa9.18□□□□□ -0.94
GGPS1-208ENST00000497327 ARAFP10398 606 aa9.17□□□□□ -0.94
GGPS1-208ENST00000497327 MAPTP10636 758 aaKnown RBP9.17□□□□□ -0.94
GGPS1-208ENST00000497327 PARP3Q9Y6F1 533 aa9.17□□□□□ -0.94
GGPS1-208ENST00000497327 DCDC2BA2VCK2 349 aa9.16□□□□□ -0.94
GGPS1-208ENST00000497327 BACH1O14867 736 aa9.16□□□□□ -0.94
GGPS1-208ENST00000497327 RAD21O60216 631 aa9.16□□□□□ -0.94
GGPS1-208ENST00000497327 UBTFP17480 764 aaKnown RBP9.16□□□□□ -0.94
GGPS1-208ENST00000497327 TXLNAP40222 546 aa9.16□□□□□ -0.94
GGPS1-208ENST00000497327 LINC00114Q6XXX2 140 aa9.16□□□□□ -0.94
GGPS1-208ENST00000497327 KLF15Q9UIH9 416 aa9.16□□□□□ -0.94
GGPS1-208ENST00000497327 KIAA1024Q9UPX6 916 aa9.16□□□□□ -0.94
GGPS1-208ENST00000497327 ZBTB7BO15156 539 aaPredicted RBP9.15□□□□□ -0.94
GGPS1-208ENST00000497327 TATP17735 454 aaPredicted RBP9.15□□□□□ -0.94
GGPS1-208ENST00000497327 ARSJQ5FYB0 599 aaPredicted RBP9.15□□□□□ -0.94
GGPS1-208ENST00000497327 FAM182BQ5T319 152 aa9.15□□□□□ -0.94
GGPS1-208ENST00000497327 PLEKHM2Q8IWE5 1019 aa9.15□□□□□ -0.94
GGPS1-208ENST00000497327 MKL2Q9ULH7 1088 aa9.15□□□□□ -0.94
GGPS1-208ENST00000497327 FAM157BP0CG42 384 aa9.14□□□□□ -0.95
GGPS1-208ENST00000497327 EPXP11678 715 aa9.14□□□□□ -0.95
GGPS1-208ENST00000497327 CD33P20138 364 aa9.14□□□□□ -0.95
GGPS1-208ENST00000497327 COL8A1P27658 744 aa9.14□□□□□ -0.95
GGPS1-208ENST00000497327 PSME1Q06323 249 aa9.14□□□□□ -0.95
GGPS1-208ENST00000497327 TEAD4Q15561 434 aa9.14□□□□□ -0.95
GGPS1-208ENST00000497327 SAMD5Q5TGI4 173 aa9.14□□□□□ -0.95
GGPS1-208ENST00000497327 C7orf43Q8WVR3 580 aa9.14□□□□□ -0.95
GGPS1-208ENST00000497327 USP17L3A6NCW0 530 aa9.13□□□□□ -0.95
GGPS1-208ENST00000497327 USP17L4A6NCW7 530 aa9.13□□□□□ -0.95
GGPS1-208ENST00000497327 NEURL1BA8MQ27 555 aa9.13□□□□□ -0.95
GGPS1-208ENST00000497327 KHNYNO15037 678 aaKnown RBP9.13□□□□□ -0.95
GGPS1-208ENST00000497327 EFSO43281 561 aa9.13□□□□□ -0.95
GGPS1-208ENST00000497327 PROCP04070 461 aa9.13□□□□□ -0.95
GGPS1-208ENST00000497327 CLDN10P78369 228 aa9.13□□□□□ -0.95
GGPS1-208ENST00000497327 USP17L2Q6R6M4 530 aa9.13□□□□□ -0.95
GGPS1-208ENST00000497327 USP17L1Q7RTZ2 530 aa9.13□□□□□ -0.95
GGPS1-208ENST00000497327 SLC9A9Q8IVB4 645 aa9.13□□□□□ -0.95
GGPS1-208ENST00000497327 TNS4Q8IZW8 715 aa9.13□□□□□ -0.95
GGPS1-208ENST00000497327 L3MBTL2Q969R5 705 aa9.13□□□□□ -0.95
GGPS1-208ENST00000497327 BTBD6Q96KE9 485 aa9.13□□□□□ -0.95
GGPS1-208ENST00000497327 SPOCK3Q9BQ16 436 aa9.13□□□□□ -0.95
GGPS1-208ENST00000497327 STRN4Q9NRL3 753 aa9.13□□□□□ -0.95
GGPS1-208ENST00000497327 BAZ1BQ9UIG0 1483 aaKnown RBP9.13□□□□□ -0.95
GGPS1-208ENST00000497327 HMGXB3Q12766 1538 aa9.12□□□□□ -0.95
GGPS1-208ENST00000497327 KRBA1A5PL33 1030 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms