RNA–Protein interactions for RNA: ENST00000497289.5

RPN1-207, Transcript of ribophorin I, humanhuman

TSL 2 BASIC

Gene RPN1, Length 2,137 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-207ENST00000497289 ZNF496Q96IT1 587 aaPredicted RBP19.73■□□□□ 0.75
RPN1-207ENST00000497289 SNRPA1P09661 255 aaKnown RBP19.72■□□□□ 0.75
RPN1-207ENST00000497289 PROSER3Q2NL68 480 aa19.72■□□□□ 0.75
RPN1-207ENST00000497289 USP35Q9P2H5 1018 aa19.72■□□□□ 0.75
RPN1-207ENST00000497289 DISP2A7MBM2 1401 aa19.72■□□□□ 0.75
RPN1-207ENST00000497289 DDX54Q8TDD1 881 aaKnown RBP19.72■□□□□ 0.75
RPN1-207ENST00000497289 IPO9Q96P70 1041 aaKnown RBP19.72■□□□□ 0.75
RPN1-207ENST00000497289 ZBTB47Q9UFB7 747 aaPredicted RBP19.72■□□□□ 0.75
RPN1-207ENST00000497289 UBTFL1P0CB47 393 aaPredicted RBP19.71■□□□□ 0.75
RPN1-207ENST00000497289 BEND3Q5T5X7 828 aa19.71■□□□□ 0.75
RPN1-207ENST00000497289 NWD2Q9ULI1 1742 aa19.71■□□□□ 0.75
RPN1-207ENST00000497289 ITGB4P16144 1822 aa19.71■□□□□ 0.75
RPN1-207ENST00000497289 DDX58O95786 925 aaKnown RBP19.7■□□□□ 0.74
RPN1-207ENST00000497289 KSR2Q6VAB6 950 aa19.7■□□□□ 0.74
RPN1-207ENST00000497289 USP44Q9H0E7 712 aa19.7■□□□□ 0.74
RPN1-207ENST00000497289 MSH5O43196 834 aa19.7■□□□□ 0.74
RPN1-207ENST00000497289 KCPQ6ZWJ8 1503 aa19.69■□□□□ 0.74
RPN1-207ENST00000497289 PDIA6Q15084 440 aa19.69■□□□□ 0.74
RPN1-207ENST00000497289 MAP3K2Q9Y2U5 619 aa19.69■□□□□ 0.74
RPN1-207ENST00000497289 LRRFIP2Q9Y608 721 aaKnown RBP19.69■□□□□ 0.74
RPN1-207ENST00000497289 LRP6O75581 1613 aa19.68■□□□□ 0.74
RPN1-207ENST00000497289 PIP4K2BP78356 416 aa19.68■□□□□ 0.74
RPN1-207ENST00000497289 ARFGEF2Q9Y6D5 1785 aa19.67■□□□□ 0.74
RPN1-207ENST00000497289 ALDH1L1O75891 902 aa19.67■□□□□ 0.74
RPN1-207ENST00000497289 ATP8B2P98198 1209 aa19.67■□□□□ 0.74
RPN1-207ENST00000497289 TNS2Q63HR2 1409 aa19.66■□□□□ 0.74
RPN1-207ENST00000497289 AFDNP55196 1824 aaKnown RBP19.66■□□□□ 0.74
RPN1-207ENST00000497289 USP16Q9Y5T5 823 aa19.66■□□□□ 0.74
RPN1-207ENST00000497289 MYL6BP14649 208 aa19.65■□□□□ 0.74
RPN1-207ENST00000497289 BMP2KLQ5H9B9 411 aa19.65■□□□□ 0.74
RPN1-207ENST00000497289 DDRGK1Q96HY6 314 aa19.65■□□□□ 0.74
RPN1-207ENST00000497289 AIMP1Q12904 312 aaKnown RBP19.64■□□□□ 0.74
RPN1-207ENST00000497289 ERBB4Q15303 1308 aa19.64■□□□□ 0.73
RPN1-207ENST00000497289 ADAMTS2O95450 1211 aa19.64■□□□□ 0.73
RPN1-207ENST00000497289 TMOD3Q9NYL9 352 aa19.64■□□□□ 0.73
RPN1-207ENST00000497289 SEC24BO95487 1268 aa19.63■□□□□ 0.73
RPN1-207ENST00000497289 UPF2Q9HAU5 1272 aaKnown RBP19.63■□□□□ 0.73
RPN1-207ENST00000497289 PNMA6EA0A0J9YXQ4 647 aa19.63■□□□□ 0.73
RPN1-207ENST00000497289 RIC3Q7Z5B4 369 aa19.63■□□□□ 0.73
RPN1-207ENST00000497289 LINS1Q8NG48 757 aa19.63■□□□□ 0.73
RPN1-207ENST00000497289 XAGE3Q8WTP9 111 aa19.63■□□□□ 0.73
RPN1-207ENST00000497289 HDAC5Q9UQL6 1122 aa19.63■□□□□ 0.73
RPN1-207ENST00000497289 IBTKQ9P2D0 1353 aaPredicted RBP19.62■□□□□ 0.73
RPN1-207ENST00000497289 NBPF7P0C2Y1 421 aaPredicted RBP19.62■□□□□ 0.73
RPN1-207ENST00000497289 NOP58Q9Y2X3 529 aaKnown RBP19.62■□□□□ 0.73
RPN1-207ENST00000497289 DOT1LQ8TEK3 1739 aa19.62■□□□□ 0.73
RPN1-207ENST00000497289 NUP188Q5SRE5 1749 aa19.62■□□□□ 0.73
RPN1-207ENST00000497289 UBAP1LF5GYI3 381 aa19.61■□□□□ 0.73
RPN1-207ENST00000497289 ERICH6Q7L0X2 663 aa19.61■□□□□ 0.73
RPN1-207ENST00000497289 COPS6Q7L5N1 327 aa19.61■□□□□ 0.73
RPN1-207ENST00000497289 PLEKHM2Q8IWE5 1019 aa19.61■□□□□ 0.73
RPN1-207ENST00000497289 CDCA7Q9BWT1 371 aaPredicted RBP19.61■□□□□ 0.73
RPN1-207ENST00000497289 APBB1O00213 710 aa19.61■□□□□ 0.73
RPN1-207ENST00000497289 LRP10Q7Z4F1 713 aa19.61■□□□□ 0.73
RPN1-207ENST00000497289 C9orf78Q9NZ63 289 aaPredicted RBP19.61■□□□□ 0.73
RPN1-207ENST00000497289 NEXNQ0ZGT2 675 aa19.6■□□□□ 0.73
RPN1-207ENST00000497289 SSH3Q8TE77 659 aa19.6■□□□□ 0.73
RPN1-207ENST00000497289 THRAP3Q9Y2W1 955 aaKnown RBP19.6■□□□□ 0.73
RPN1-207ENST00000497289 NUTM2BA6NNL0 878 aaPredicted RBP19.6■□□□□ 0.73
RPN1-207ENST00000497289 NUTM2EB1AL46 878 aaPredicted RBP19.6■□□□□ 0.73
RPN1-207ENST00000497289 EXOC5O00471 708 aa19.6■□□□□ 0.73
RPN1-207ENST00000497289 SMARCA5O60264 1052 aaPredicted RBP19.6■□□□□ 0.73
RPN1-207ENST00000497289 NUTM2AQ8IVF1 878 aaPredicted RBP19.6■□□□□ 0.73
RPN1-207ENST00000497289 EXOC6BQ9Y2D4 811 aa19.6■□□□□ 0.73
RPN1-207ENST00000497289 SPATA31A1Q5TZJ5 1347 aa19.6■□□□□ 0.73
RPN1-207ENST00000497289 SLIT2O94813 1529 aa19.59■□□□□ 0.73
RPN1-207ENST00000497289 CWF19L2Q2TBE0 894 aaKnown RBP19.59■□□□□ 0.73
RPN1-207ENST00000497289 POLA2Q14181 598 aa19.58■□□□□ 0.73
RPN1-207ENST00000497289 AEBP2Q6ZN18 517 aaPredicted RBP19.58■□□□□ 0.73
RPN1-207ENST00000497289 PPP1R42Q7Z4L9 355 aa19.58■□□□□ 0.73
RPN1-207ENST00000497289 ANKRD13DQ6ZTN6 518 aa19.58■□□□□ 0.72
RPN1-207ENST00000497289 METTL22Q9BUU2 404 aaPredicted RBP19.58■□□□□ 0.72
RPN1-207ENST00000497289 LRRCC1Q9C099 1032 aa19.58■□□□□ 0.72
RPN1-207ENST00000497289 UTYO14607 1347 aa19.57■□□□□ 0.72
RPN1-207ENST00000497289 TTC22Q5TAA0 569 aa19.57■□□□□ 0.72
RPN1-207ENST00000497289 C16orf71Q8IYS4 520 aaPredicted RBP19.57■□□□□ 0.72
RPN1-207ENST00000497289 TUBGCP6Q96RT7 1819 aa19.57■□□□□ 0.72
RPN1-207ENST00000497289 GRM8O00222 908 aa19.57■□□□□ 0.72
RPN1-207ENST00000497289 PTCD1O75127 700 aaKnown RBP19.57■□□□□ 0.72
RPN1-207ENST00000497289 PIP4K2AP48426 406 aaPredicted RBP19.57■□□□□ 0.72
RPN1-207ENST00000497289 SRGAP3O43295 1099 aa19.56■□□□□ 0.72
RPN1-207ENST00000497289 BCL11AQ9H165 835 aa19.56■□□□□ 0.72
RPN1-207ENST00000497289 MTX1Q13505 466 aa19.55■□□□□ 0.72
RPN1-207ENST00000497289 PIGBQ92521 554 aa19.55■□□□□ 0.72
RPN1-207ENST00000497289 MYD88Q99836 296 aa19.55■□□□□ 0.72
RPN1-207ENST00000497289 BCL9O00512 1426 aa19.55■□□□□ 0.72
RPN1-207ENST00000497289 NEURL1BA8MQ27 555 aa19.55■□□□□ 0.72
RPN1-207ENST00000497289 RAB11FIP3O75154 756 aa19.55■□□□□ 0.72
RPN1-207ENST00000497289 IGKV5-2P06315 115 aa19.55■□□□□ 0.72
RPN1-207ENST00000497289 JCADQ9P266 1359 aa19.55■□□□□ 0.72
RPN1-207ENST00000497289 SPATA31A5Q5VU36 1347 aa19.54■□□□□ 0.72
RPN1-207ENST00000497289 SPATA31A7Q8IWB4 1347 aa19.54■□□□□ 0.72
RPN1-207ENST00000497289 KAT6BQ8WYB5 2073 aa19.54■□□□□ 0.72
RPN1-207ENST00000497289 NBPF26B4DH59 902 aa19.54■□□□□ 0.72
RPN1-207ENST00000497289 GSPT1P15170 499 aaKnown RBP19.54■□□□□ 0.72
RPN1-207ENST00000497289 NBPF14Q5TI25 921 aa19.54■□□□□ 0.72
RPN1-207ENST00000497289 NBPF10Q6P3W6 841 aaKnown RBP19.54■□□□□ 0.72
RPN1-207ENST00000497289 NBPF15Q8N660 670 aa19.54■□□□□ 0.72
RPN1-207ENST00000497289 PLBD2Q8NHP8 589 aa19.54■□□□□ 0.72
RPN1-207ENST00000497289 OTUD7AQ8TE49 926 aaPredicted RBP19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms