RNA–Protein interactions for RNA: ENST00000497072.1

PPM1F-209, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1F, humanhuman

TSL 3

Gene PPM1F, Length 159 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1F-209ENST00000497072 COL15A1P39059 1388 aa16.9■□□□□ 0.3
PPM1F-209ENST00000497072 A0A087WZG4 1122 aa16.9■□□□□ 0.3
PPM1F-209ENST00000497072 BTBD11A6QL63 1104 aa16.9■□□□□ 0.3
PPM1F-209ENST00000497072 C1QTNF8P60827 252 aa16.9■□□□□ 0.3
PPM1F-209ENST00000497072 PHACTR3Q96KR7 559 aa16.9■□□□□ 0.3
PPM1F-209ENST00000497072 FMNL2Q96PY5 1086 aa16.9■□□□□ 0.3
PPM1F-209ENST00000497072 NARFQ9UHQ1 456 aa16.9■□□□□ 0.3
PPM1F-209ENST00000497072 KIF13BQ9NQT8 1826 aa16.9■□□□□ 0.3
PPM1F-209ENST00000497072 DPEP1P16444 411 aa16.89■□□□□ 0.29
PPM1F-209ENST00000497072 GPBP1L1Q9HC44 474 aaPredicted RBP16.89■□□□□ 0.29
PPM1F-209ENST00000497072 HEG1Q9ULI3 1381 aa16.89■□□□□ 0.29
PPM1F-209ENST00000497072 N4BP2Q86UW6 1770 aaPredicted RBP16.88■□□□□ 0.29
PPM1F-209ENST00000497072 ZNF496Q96IT1 587 aaPredicted RBP16.88■□□□□ 0.29
PPM1F-209ENST00000497072 PIM2Q9P1W9 311 aa16.88■□□□□ 0.29
PPM1F-209ENST00000497072 ATP10DQ9P241 1426 aa16.87■□□□□ 0.29
PPM1F-209ENST00000497072 UBR2Q8IWV8 1755 aa16.87■□□□□ 0.29
PPM1F-209ENST00000497072 TM4SF1P30408 202 aa16.87■□□□□ 0.29
PPM1F-209ENST00000497072 DDR1Q08345 913 aa16.87■□□□□ 0.29
PPM1F-209ENST00000497072 ARHGAP27Q6ZUM4 889 aa16.87■□□□□ 0.29
PPM1F-209ENST00000497072 ZNF330Q9Y3S2 320 aaPredicted RBP16.87■□□□□ 0.29
PPM1F-209ENST00000497072 CEMIPQ8WUJ3 1361 aa16.87■□□□□ 0.29
PPM1F-209ENST00000497072 POLRMTO00411 1230 aaKnown RBP16.86■□□□□ 0.29
PPM1F-209ENST00000497072 PNNQ9H307 717 aaKnown RBP16.86■□□□□ 0.29
PPM1F-209ENST00000497072 SENP3-EIF4A1A0A087X0R7 540 aa16.85■□□□□ 0.29
PPM1F-209ENST00000497072 HTATSF1O43719 755 aaKnown RBP16.85■□□□□ 0.29
PPM1F-209ENST00000497072 DALRD3Q5D0E6 543 aaKnown RBP16.85■□□□□ 0.29
PPM1F-209ENST00000497072 ZNF526Q8TF50 670 aaPredicted RBP16.85■□□□□ 0.29
PPM1F-209ENST00000497072 EIF5P55010 431 aaKnown RBP16.84■□□□□ 0.29
PPM1F-209ENST00000497072 NFIXQ14938 502 aa16.84■□□□□ 0.29
PPM1F-209ENST00000497072 MCM10Q7L590 875 aa16.84■□□□□ 0.29
PPM1F-209ENST00000497072 SIPA1L3O60292 1781 aaPredicted RBP16.84■□□□□ 0.29
PPM1F-209ENST00000497072 SERPINB2P05120 415 aa16.83■□□□□ 0.28
PPM1F-209ENST00000497072 IL6STP40189 918 aaPredicted RBP16.83■□□□□ 0.28
PPM1F-209ENST00000497072 KIAA1551Q9HCM1 1747 aa16.83■□□□□ 0.28
PPM1F-209ENST00000497072 ADCY9O60503 1353 aa16.82■□□□□ 0.28
PPM1F-209ENST00000497072 BICDL1Q6ZP65 573 aa16.82■□□□□ 0.28
PPM1F-209ENST00000497072 MAPK8IP3Q9UPT6 1336 aa16.81■□□□□ 0.28
PPM1F-209ENST00000497072 NPHP1O15259 732 aa16.81■□□□□ 0.28
PPM1F-209ENST00000497072 SNRPA1P09661 255 aaKnown RBP16.81■□□□□ 0.28
PPM1F-209ENST00000497072 KCNA3P22001 575 aa16.81■□□□□ 0.28
PPM1F-209ENST00000497072 KCNQ3O43525 872 aa16.8■□□□□ 0.28
PPM1F-209ENST00000497072 A1BGP04217 495 aa16.8■□□□□ 0.28
PPM1F-209ENST00000497072 CHRNA5P30532 468 aa16.8■□□□□ 0.28
PPM1F-209ENST00000497072 BCL2L12Q9HB09 334 aa16.8■□□□□ 0.28
PPM1F-209ENST00000497072 TBC1D2BQ9UPU7 963 aa16.8■□□□□ 0.28
PPM1F-209ENST00000497072 DCTN1Q14203 1278 aa16.79■□□□□ 0.28
PPM1F-209ENST00000497072 RALBP1Q15311 655 aa16.79■□□□□ 0.28
PPM1F-209ENST00000497072 TAF7Q15545 349 aaPredicted RBP16.79■□□□□ 0.28
PPM1F-209ENST00000497072 PNISRQ8TF01 805 aaKnown RBP16.79■□□□□ 0.28
PPM1F-209ENST00000497072 BRCA1P38398 1863 aaKnown RBP16.78■□□□□ 0.28
PPM1F-209ENST00000497072 H0YIN7 160 aa16.78■□□□□ 0.28
PPM1F-209ENST00000497072 SETDB2Q96T68 719 aa16.78■□□□□ 0.28
PPM1F-209ENST00000497072 PDZRN3Q9UPQ7 1066 aa16.78■□□□□ 0.28
PPM1F-209ENST00000497072 ARFGEF1Q9Y6D6 1849 aa16.77■□□□□ 0.28
PPM1F-209ENST00000497072 TBC1D9BQ66K14 1250 aa16.77■□□□□ 0.28
PPM1F-209ENST00000497072 DZIP3Q86Y13 1208 aaKnown RBP16.77■□□□□ 0.28
PPM1F-209ENST00000497072 C2CD5Q86YS7 1000 aa16.77■□□□□ 0.28
PPM1F-209ENST00000497072 ZNF652Q9Y2D9 606 aa16.77■□□□□ 0.28
PPM1F-209ENST00000497072 USP16Q9Y5T5 823 aa16.77■□□□□ 0.28
PPM1F-209ENST00000497072 AFDNP55196 1824 aaKnown RBP16.77■□□□□ 0.27
PPM1F-209ENST00000497072 CARMIL3Q8ND23 1372 aa16.77■□□□□ 0.27
PPM1F-209ENST00000497072 PDE6BP35913 854 aa16.76■□□□□ 0.27
PPM1F-209ENST00000497072 NFE2L2Q16236 605 aa16.76■□□□□ 0.27
PPM1F-209ENST00000497072 C9orf131Q5VYM1 1079 aa16.76■□□□□ 0.27
PPM1F-209ENST00000497072 ST5P78524 1137 aa16.75■□□□□ 0.27
PPM1F-209ENST00000497072 DDX10Q13206 875 aaKnown RBP16.75■□□□□ 0.27
PPM1F-209ENST00000497072 TTLL6Q8N841 843 aa16.75■□□□□ 0.27
PPM1F-209ENST00000497072 NRXN2Q9P2S2 1712 aa16.74■□□□□ 0.27
PPM1F-209ENST00000497072 CNBD1Q8NA66 436 aa16.74■□□□□ 0.27
PPM1F-209ENST00000497072 BRIP1Q9BX63 1249 aa16.74■□□□□ 0.27
PPM1F-209ENST00000497072 RNF181Q9P0P0 153 aa16.74■□□□□ 0.27
PPM1F-209ENST00000497072 SCN7AQ01118 1682 aa16.74■□□□□ 0.27
PPM1F-209ENST00000497072 PRAMEF22A3QJZ6 481 aa16.73■□□□□ 0.27
PPM1F-209ENST00000497072 CAMTA2O94983 1202 aa16.73■□□□□ 0.27
PPM1F-209ENST00000497072 PIP4K2AP48426 406 aaPredicted RBP16.73■□□□□ 0.27
PPM1F-209ENST00000497072 CLEC4GQ6UXB4 293 aa16.73■□□□□ 0.27
PPM1F-209ENST00000497072 ZNF622Q969S3 477 aaKnown RBP eCLIP16.73■□□□□ 0.27
PPM1F-209ENST00000497072 PLEKHF1Q96S99 279 aa16.73■□□□□ 0.27
PPM1F-209ENST00000497072 MIS18AQ9NYP9 233 aa16.73■□□□□ 0.27
PPM1F-209ENST00000497072 KDM2BQ8NHM5 1336 aa16.71■□□□□ 0.27
PPM1F-209ENST00000497072 LMOD3Q0VAK6 560 aa16.71■□□□□ 0.27
PPM1F-209ENST00000497072 PRR5LQ6MZQ0 368 aa16.71■□□□□ 0.27
PPM1F-209ENST00000497072 NBPF5PQ86XG9 351 aaPredicted RBP16.71■□□□□ 0.27
PPM1F-209ENST00000497072 C16orf71Q8IYS4 520 aaPredicted RBP16.71■□□□□ 0.27
PPM1F-209ENST00000497072 MYBBP1AQ9BQG0 1328 aaKnown RBP16.7■□□□□ 0.26
PPM1F-209ENST00000497072 DLG5Q8TDM6 1919 aa16.7■□□□□ 0.26
PPM1F-209ENST00000497072 KIF3CO14782 793 aa16.69■□□□□ 0.26
PPM1F-209ENST00000497072 RGL2O15211 777 aa16.69■□□□□ 0.26
PPM1F-209ENST00000497072 RIPK4P57078 832 aa16.69■□□□□ 0.26
PPM1F-209ENST00000497072 CCDC24Q8N4L8 307 aa16.69■□□□□ 0.26
PPM1F-209ENST00000497072 DLEC1Q9Y238 1755 aa16.69■□□□□ 0.26
PPM1F-209ENST00000497072 LMNB1P20700 586 aa16.68■□□□□ 0.26
PPM1F-209ENST00000497072 GTF2E1P29083 439 aaPredicted RBP16.68■□□□□ 0.26
PPM1F-209ENST00000497072 WDR43Q15061 677 aaKnown RBP eCLIP16.68■□□□□ 0.26
PPM1F-209ENST00000497072 TPTE2Q6XPS3 522 aa16.68■□□□□ 0.26
PPM1F-209ENST00000497072 CNKSR1Q969H4 720 aa16.68■□□□□ 0.26
PPM1F-209ENST00000497072 TSPYL4Q9UJ04 414 aa16.68■□□□□ 0.26
PPM1F-209ENST00000497072 NIP7Q9Y221 180 aaKnown RBP eCLIP16.68■□□□□ 0.26
PPM1F-209ENST00000497072 BCORQ6W2J9 1755 aa16.68■□□□□ 0.26
PPM1F-209ENST00000497072 NBPF26B4DH59 902 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms