RNA–Protein interactions for RNA: ENST00000496840.1

TARDBP-210, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 692 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-210ENST00000496840 TEAD4Q15561 434 aa12.47□□□□□ -0.41
TARDBP-210ENST00000496840 SLC9A9Q8IVB4 645 aa12.47□□□□□ -0.41
TARDBP-210ENST00000496840 RUBCNLQ9H714 662 aa12.47□□□□□ -0.41
TARDBP-210ENST00000496840 UBAP2LQ14157 1087 aaKnown RBP12.46□□□□□ -0.41
TARDBP-210ENST00000496840 CRTC2Q53ET0 693 aaPredicted RBP12.46□□□□□ -0.41
TARDBP-210ENST00000496840 EFHC2Q5JST6 749 aa12.46□□□□□ -0.41
TARDBP-210ENST00000496840 FAM181BA6NEQ2 426 aa12.45□□□□□ -0.42
TARDBP-210ENST00000496840 GPR25O00155 361 aa12.45□□□□□ -0.42
TARDBP-210ENST00000496840 SEC13P55735 322 aa12.45□□□□□ -0.42
TARDBP-210ENST00000496840 SRSF11Q05519 484 aaKnown RBP12.45□□□□□ -0.42
TARDBP-210ENST00000496840 ZDHHC1Q8WTX9 485 aa12.45□□□□□ -0.42
TARDBP-210ENST00000496840 AIDAQ96BJ3 306 aa12.45□□□□□ -0.42
TARDBP-210ENST00000496840 CFHR5Q9BXR6 569 aa12.45□□□□□ -0.42
TARDBP-210ENST00000496840 MBIPQ9NS73 344 aa12.45□□□□□ -0.42
TARDBP-210ENST00000496840 SFI1A8K8P3 1242 aa12.44□□□□□ -0.42
TARDBP-210ENST00000496840 USP17L15C9J2P7 530 aa12.44□□□□□ -0.42
TARDBP-210ENST00000496840 USP17L10C9JJH3 530 aa12.44□□□□□ -0.42
TARDBP-210ENST00000496840 USP17L13C9JLJ4 530 aa12.44□□□□□ -0.42
TARDBP-210ENST00000496840 USP17L12C9JPN9 530 aa12.44□□□□□ -0.42
TARDBP-210ENST00000496840 USP17L11C9JVI0 530 aa12.44□□□□□ -0.42
TARDBP-210ENST00000496840 USP17L21D6R901 530 aa12.44□□□□□ -0.42
TARDBP-210ENST00000496840 USP17L18D6R9N7 530 aa12.44□□□□□ -0.42
TARDBP-210ENST00000496840 USP17L22D6RA61 530 aa12.44□□□□□ -0.42
TARDBP-210ENST00000496840 USP17L17D6RBQ6 530 aa12.44□□□□□ -0.42
TARDBP-210ENST00000496840 USP17L19D6RCP7 530 aa12.44□□□□□ -0.42
TARDBP-210ENST00000496840 USP17L20D6RJB6 530 aa12.44□□□□□ -0.42
TARDBP-210ENST00000496840 USP17L24Q0WX57 530 aa12.44□□□□□ -0.42
TARDBP-210ENST00000496840 TATP17735 454 aaPredicted RBP12.43□□□□□ -0.42
TARDBP-210ENST00000496840 NOS2P35228 1153 aa12.43□□□□□ -0.42
TARDBP-210ENST00000496840 NLRP8Q86W28 1048 aa12.43□□□□□ -0.42
TARDBP-210ENST00000496840 TSEN2Q8NCE0 465 aaKnown RBP12.43□□□□□ -0.42
TARDBP-210ENST00000496840 POTEAQ6S8J7 498 aa12.42□□□□□ -0.42
TARDBP-210ENST00000496840 ANKMY2Q8IV38 441 aa12.42□□□□□ -0.42
TARDBP-210ENST00000496840 L3MBTL2Q969R5 705 aa12.42□□□□□ -0.42
TARDBP-210ENST00000496840 TSPAN10Q9H1Z9 355 aaPredicted RBP12.42□□□□□ -0.42
TARDBP-210ENST00000496840 PHF24Q9UPV7 400 aa12.42□□□□□ -0.42
TARDBP-210ENST00000496840 PSMA6P60900 246 aaKnown RBP12.41□□□□□ -0.42
TARDBP-210ENST00000496840 DPYDQ12882 1025 aa12.41□□□□□ -0.42
TARDBP-210ENST00000496840 ADAMTS2O95450 1211 aa12.4□□□□□ -0.42
TARDBP-210ENST00000496840 HIRAP54198 1017 aaPredicted RBP12.4□□□□□ -0.42
TARDBP-210ENST00000496840 TBCELQ5QJ74 424 aa12.4□□□□□ -0.42
TARDBP-210ENST00000496840 FIGNL1Q6PIW4 674 aa12.4□□□□□ -0.42
TARDBP-210ENST00000496840 NDFIP2Q9NV92 336 aa12.4□□□□□ -0.42
TARDBP-210ENST00000496840 PARP3Q9Y6F1 533 aa12.4□□□□□ -0.42
TARDBP-210ENST00000496840 SERTM1A2A2V5 107 aa12.39□□□□□ -0.43
TARDBP-210ENST00000496840 EML1O00423 815 aa12.39□□□□□ -0.43
TARDBP-210ENST00000496840 TXLNAP40222 546 aa12.39□□□□□ -0.43
TARDBP-210ENST00000496840 GAS2L2Q8NHY3 880 aa12.39□□□□□ -0.43
TARDBP-210ENST00000496840 ATXN7L1Q9ULK2 861 aaPredicted RBP12.39□□□□□ -0.43
TARDBP-210ENST00000496840 A0A1W2PNR3 127 aa12.38□□□□□ -0.43
TARDBP-210ENST00000496840 MX2P20592 715 aa12.38□□□□□ -0.43
TARDBP-210ENST00000496840 ARSJQ5FYB0 599 aaPredicted RBP12.38□□□□□ -0.43
TARDBP-210ENST00000496840 STAG2Q8N3U4 1231 aa12.38□□□□□ -0.43
TARDBP-210ENST00000496840 ARXQ96QS3 562 aa12.38□□□□□ -0.43
TARDBP-210ENST00000496840 ZIC5Q96T25 663 aa12.38□□□□□ -0.43
TARDBP-210ENST00000496840 ZNF232Q9UNY5 417 aa12.38□□□□□ -0.43
TARDBP-210ENST00000496840 CHMP3Q9Y3E7 222 aa12.38□□□□□ -0.43
TARDBP-210ENST00000496840 GPC6Q9Y625 555 aaPredicted RBP12.38□□□□□ -0.43
TARDBP-210ENST00000496840 ZNF385CQ66K41 422 aaPredicted RBP12.37□□□□□ -0.43
TARDBP-210ENST00000496840 NSFL1CQ9UNZ2 370 aaKnown RBP12.37□□□□□ -0.43
TARDBP-210ENST00000496840 IGF1RP08069 1367 aa12.37□□□□□ -0.43
TARDBP-210ENST00000496840 C21orf2O43822 256 aa12.36□□□□□ -0.43
TARDBP-210ENST00000496840 RFX1P22670 979 aa12.36□□□□□ -0.43
TARDBP-210ENST00000496840 ZCCHC2Q9C0B9 1178 aaKnown RBP12.36□□□□□ -0.43
TARDBP-210ENST00000496840 SERPINA10Q9UK55 444 aa12.36□□□□□ -0.43
TARDBP-210ENST00000496840 PCDHGC4Q9Y5F7 938 aa12.36□□□□□ -0.43
TARDBP-210ENST00000496840 BNIP3LO60238 219 aa12.35□□□□□ -0.43
TARDBP-210ENST00000496840 C1orf53Q5VUE5 145 aa12.35□□□□□ -0.43
TARDBP-210ENST00000496840 ATAD2Q6PL18 1390 aa12.34□□□□□ -0.43
TARDBP-210ENST00000496840 PPP1R12BO60237 982 aaPredicted RBP12.34□□□□□ -0.43
TARDBP-210ENST00000496840 MAP2K3P46734 347 aa12.34□□□□□ -0.43
TARDBP-210ENST00000496840 SRPK2P78362 688 aaKnown RBP12.34□□□□□ -0.43
TARDBP-210ENST00000496840 SAMD5Q5TGI4 173 aa12.34□□□□□ -0.43
TARDBP-210ENST00000496840 C7orf43Q8WVR3 580 aa12.34□□□□□ -0.43
TARDBP-210ENST00000496840 CCDC97Q96F63 343 aaPredicted RBP12.34□□□□□ -0.43
TARDBP-210ENST00000496840 ELOAQ14241 798 aaKnown RBP12.33□□□□□ -0.44
TARDBP-210ENST00000496840 SH3PXD2AQ5TCZ1 1133 aa12.33□□□□□ -0.44
TARDBP-210ENST00000496840 BICDL1Q6ZP65 573 aa12.33□□□□□ -0.44
TARDBP-210ENST00000496840 C14orf37Q86TY3 774 aa12.33□□□□□ -0.44
TARDBP-210ENST00000496840 WHAMMQ8TF30 809 aa12.33□□□□□ -0.44
TARDBP-210ENST00000496840 ABHD17AQ96GS6 310 aa12.33□□□□□ -0.44
TARDBP-210ENST00000496840 ATXN7O15265 892 aaPredicted RBP12.32□□□□□ -0.44
TARDBP-210ENST00000496840 IGFBP4P22692 258 aa12.32□□□□□ -0.44
TARDBP-210ENST00000496840 SVOPQ8N4V2 548 aa12.32□□□□□ -0.44
TARDBP-210ENST00000496840 FAM200AQ8TCP9 573 aa12.32□□□□□ -0.44
TARDBP-210ENST00000496840 SCG3Q8WXD2 468 aaKnown RBP12.32□□□□□ -0.44
TARDBP-210ENST00000496840 HINFPQ9BQA5 517 aa12.32□□□□□ -0.44
TARDBP-210ENST00000496840 C2orf49Q9BVC5 232 aaPredicted RBP12.32□□□□□ -0.44
TARDBP-210ENST00000496840 FAM157BP0CG42 384 aa12.31□□□□□ -0.44
TARDBP-210ENST00000496840 FGFR3P22607 806 aa12.31□□□□□ -0.44
TARDBP-210ENST00000496840 CDCA8Q53HL2 280 aa12.31□□□□□ -0.44
TARDBP-210ENST00000496840 LYPD4Q6UWN0 246 aa12.31□□□□□ -0.44
TARDBP-210ENST00000496840 GJA3Q9Y6H8 435 aa12.31□□□□□ -0.44
TARDBP-210ENST00000496840 ARID3CA6NKF2 412 aa12.3□□□□□ -0.44
TARDBP-210ENST00000496840 ARHGEF15O94989 841 aa12.3□□□□□ -0.44
TARDBP-210ENST00000496840 LRRC4BQ9NT99 713 aa12.3□□□□□ -0.44
TARDBP-210ENST00000496840 NOVA2Q9UNW9 492 aaKnown RBP12.3□□□□□ -0.44
TARDBP-210ENST00000496840 CELA2BP08218 269 aaPredicted RBP12.29□□□□□ -0.44
TARDBP-210ENST00000496840 TNP2Q05952 138 aa12.29□□□□□ -0.44
TARDBP-210ENST00000496840 RHPN1Q8TCX5 695 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms