RNA–Protein interactions for RNA: ENST00000496810.1

COL20A1-208, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 723 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-208ENST00000496810 AFDNP55196 1824 aaKnown RBP26.04■■□□□ 1.76
COL20A1-208ENST00000496810 VSIG10Q8N0Z9 540 aa26.03■■□□□ 1.76
COL20A1-208ENST00000496810 NLGN1Q8N2Q7 840 aa26.03■■□□□ 1.76
COL20A1-208ENST00000496810 DDR1Q08345 913 aa26.02■■□□□ 1.76
COL20A1-208ENST00000496810 KDM3BQ7LBC6 1761 aa26.02■■□□□ 1.76
COL20A1-208ENST00000496810 PLEKHF1Q96S99 279 aa26■■□□□ 1.75
COL20A1-208ENST00000496810 BTBD11A6QL63 1104 aa25.99■■□□□ 1.75
COL20A1-208ENST00000496810 USPL1Q5W0Q7 1092 aa25.99■■□□□ 1.75
COL20A1-208ENST00000496810 NRXN2Q9P2S2 1712 aa25.98■■□□□ 1.75
COL20A1-208ENST00000496810 CANXP27824 592 aaKnown RBP25.98■■□□□ 1.75
COL20A1-208ENST00000496810 RALBP1Q15311 655 aa25.98■■□□□ 1.75
COL20A1-208ENST00000496810 LAMB4A4D0S4 1761 aa25.97■■□□□ 1.75
COL20A1-208ENST00000496810 BCORQ6W2J9 1755 aa25.97■■□□□ 1.75
COL20A1-208ENST00000496810 ZNF784Q8NCA9 323 aaPredicted RBP25.97■■□□□ 1.75
COL20A1-208ENST00000496810 RTF1Q92541 710 aaKnown RBP25.97■■□□□ 1.75
COL20A1-208ENST00000496810 PRAMEF22A3QJZ6 481 aa25.96■■□□□ 1.75
COL20A1-208ENST00000496810 FMNL2Q96PY5 1086 aa25.96■■□□□ 1.75
COL20A1-208ENST00000496810 BCL2L12Q9HB09 334 aa25.96■■□□□ 1.75
COL20A1-208ENST00000496810 PARP3Q9Y6F1 533 aa25.95■■□□□ 1.74
COL20A1-208ENST00000496810 STARD3NLO95772 234 aa25.94■■□□□ 1.74
COL20A1-208ENST00000496810 THUMPD2Q9BTF0 503 aaKnown RBP25.94■■□□□ 1.74
COL20A1-208ENST00000496810 NARFQ9UHQ1 456 aa25.94■■□□□ 1.74
COL20A1-208ENST00000496810 MYBBP1AQ9BQG0 1328 aaKnown RBP25.93■■□□□ 1.74
COL20A1-208ENST00000496810 POLRMTO00411 1230 aaKnown RBP25.93■■□□□ 1.74
COL20A1-208ENST00000496810 ZPR1O75312 459 aa25.93■■□□□ 1.74
COL20A1-208ENST00000496810 EIF5P55010 431 aaKnown RBP25.93■■□□□ 1.74
COL20A1-208ENST00000496810 A0A0G2JLW4 131 aa25.92■■□□□ 1.74
COL20A1-208ENST00000496810 GRIN3BO60391 1043 aa25.92■■□□□ 1.74
COL20A1-208ENST00000496810 A1BGP04217 495 aa25.92■■□□□ 1.74
COL20A1-208ENST00000496810 PIP4K2AP48426 406 aaPredicted RBP25.92■■□□□ 1.74
COL20A1-208ENST00000496810 MIS18AQ9NYP9 233 aa25.92■■□□□ 1.74
COL20A1-208ENST00000496810 HTATSF1O43719 755 aaKnown RBP25.91■■□□□ 1.74
COL20A1-208ENST00000496810 TM4SF1P30408 202 aa25.91■■□□□ 1.74
COL20A1-208ENST00000496810 NFE2L2Q16236 605 aa25.91■■□□□ 1.74
COL20A1-208ENST00000496810 ARFGEF1Q9Y6D6 1849 aa25.91■■□□□ 1.74
COL20A1-208ENST00000496810 DPEP1P16444 411 aa25.9■■□□□ 1.74
COL20A1-208ENST00000496810 NFIXQ14938 502 aa25.9■■□□□ 1.74
COL20A1-208ENST00000496810 ZNF330Q9Y3S2 320 aaPredicted RBP25.9■■□□□ 1.74
COL20A1-208ENST00000496810 DLEC1Q9Y238 1755 aa25.9■■□□□ 1.74
COL20A1-208ENST00000496810 ANKRD31Q8N7Z5 1873 aa25.89■■□□□ 1.74
COL20A1-208ENST00000496810 USP16Q9Y5T5 823 aa25.89■■□□□ 1.74
COL20A1-208ENST00000496810 MAPK8IP3Q9UPT6 1336 aa25.88■■□□□ 1.73
COL20A1-208ENST00000496810 CARMIL3Q8ND23 1372 aa25.87■■□□□ 1.73
COL20A1-208ENST00000496810 TGFB2P61812 414 aa25.87■■□□□ 1.73
COL20A1-208ENST00000496810 TEX13AQ9BXU3 409 aaPredicted RBP25.87■■□□□ 1.73
COL20A1-208ENST00000496810 NEFMP07197 916 aa25.86■■□□□ 1.73
COL20A1-208ENST00000496810 KCNA3P22001 575 aa25.86■■□□□ 1.73
COL20A1-208ENST00000496810 TBC1D2BQ9UPU7 963 aa25.86■■□□□ 1.73
COL20A1-208ENST00000496810 COL11A2P13942 1736 aaPredicted RBP25.85■■□□□ 1.73
COL20A1-208ENST00000496810 IL6STP40189 918 aaPredicted RBP25.85■■□□□ 1.73
COL20A1-208ENST00000496810 TAF7Q15545 349 aaPredicted RBP25.85■■□□□ 1.73
COL20A1-208ENST00000496810 CHRNA5P30532 468 aa25.84■■□□□ 1.73
COL20A1-208ENST00000496810 CCDC146Q8IYE0 955 aa25.84■■□□□ 1.73
COL20A1-208ENST00000496810 PRKRIP1Q9H875 184 aaPredicted RBP25.84■■□□□ 1.73
COL20A1-208ENST00000496810 BCS1LQ9Y276 419 aa25.84■■□□□ 1.73
COL20A1-208ENST00000496810 ADCY9O60503 1353 aa25.83■■□□□ 1.73
COL20A1-208ENST00000496810 SNRPA1P09661 255 aaKnown RBP25.83■■□□□ 1.73
COL20A1-208ENST00000496810 BICDL1Q6ZP65 573 aa25.83■■□□□ 1.73
COL20A1-208ENST00000496810 TBC1D9BQ66K14 1250 aa25.82■■□□□ 1.72
COL20A1-208ENST00000496810 ATP10DQ9P241 1426 aa25.81■■□□□ 1.72
COL20A1-208ENST00000496810 A0A087WZG4 1122 aa25.81■■□□□ 1.72
COL20A1-208ENST00000496810 NBPF26B4DH59 902 aa25.81■■□□□ 1.72
COL20A1-208ENST00000496810 CAMTA2O94983 1202 aa25.81■■□□□ 1.72
COL20A1-208ENST00000496810 NBPF10Q6P3W6 841 aaKnown RBP25.81■■□□□ 1.72
COL20A1-208ENST00000496810 NBPF15Q8N660 670 aa25.81■■□□□ 1.72
COL20A1-208ENST00000496810 RRP7AQ9Y3A4 280 aaKnown RBP25.8■■□□□ 1.72
COL20A1-208ENST00000496810 SERPINB2P05120 415 aa25.79■■□□□ 1.72
COL20A1-208ENST00000496810 PNNQ9H307 717 aaKnown RBP25.78■■□□□ 1.72
COL20A1-208ENST00000496810 CACNA1SQ13698 1873 aa25.77■■□□□ 1.72
COL20A1-208ENST00000496810 TMPOP42166 694 aaKnown RBP25.77■■□□□ 1.72
COL20A1-208ENST00000496810 RIPK4P57078 832 aa25.77■■□□□ 1.72
COL20A1-208ENST00000496810 DZIP3Q86Y13 1208 aaKnown RBP25.77■■□□□ 1.72
COL20A1-208ENST00000496810 EIF4A1P60842 406 aaKnown RBP25.76■■□□□ 1.71
COL20A1-208ENST00000496810 CCDC24Q8N4L8 307 aa25.76■■□□□ 1.71
COL20A1-208ENST00000496810 GIGYF1O75420 1035 aaPredicted RBP25.74■■□□□ 1.71
COL20A1-208ENST00000496810 PIM2Q9P1W9 311 aa25.74■■□□□ 1.71
COL20A1-208ENST00000496810 ADAMTS8Q9UP79 889 aa25.74■■□□□ 1.71
COL20A1-208ENST00000496810 SBF1O95248 1867 aa25.73■■□□□ 1.71
COL20A1-208ENST00000496810 NUP98P52948 1817 aa25.73■■□□□ 1.71
COL20A1-208ENST00000496810 WDR43Q15061 677 aaKnown RBP eCLIP25.73■■□□□ 1.71
COL20A1-208ENST00000496810 PNISRQ8TF01 805 aaKnown RBP25.73■■□□□ 1.71
COL20A1-208ENST00000496810 ZEB1P37275 1124 aaPredicted RBP25.72■■□□□ 1.71
COL20A1-208ENST00000496810 NEUROD2Q15784 382 aa25.72■■□□□ 1.71
COL20A1-208ENST00000496810 PRR5LQ6MZQ0 368 aa25.72■■□□□ 1.71
COL20A1-208ENST00000496810 DALRD3Q5D0E6 543 aaKnown RBP25.71■■□□□ 1.71
COL20A1-208ENST00000496810 TSPYL4Q9UJ04 414 aa25.71■■□□□ 1.71
COL20A1-208ENST00000496810 ARHGAP27Q6ZUM4 889 aa25.7■■□□□ 1.7
COL20A1-208ENST00000496810 NPM2Q86SE8 214 aaKnown RBP25.7■■□□□ 1.7
COL20A1-208ENST00000496810 ZNF526Q8TF50 670 aaPredicted RBP25.7■■□□□ 1.7
COL20A1-208ENST00000496810 RUNDC1Q96C34 613 aa25.69■■□□□ 1.7
COL20A1-208ENST00000496810 TRIM35Q9UPQ4 493 aa25.69■■□□□ 1.7
COL20A1-208ENST00000496810 TNRC6CQ9HCJ0 1690 aaKnown RBP25.68■■□□□ 1.7
COL20A1-208ENST00000496810 CCDC184Q52MB2 194 aa25.68■■□□□ 1.7
COL20A1-208ENST00000496810 C2CD5Q86YS7 1000 aa25.68■■□□□ 1.7
COL20A1-208ENST00000496810 ARFGEF2Q9Y6D5 1785 aa25.67■■□□□ 1.7
COL20A1-208ENST00000496810 SETDB2Q96T68 719 aa25.67■■□□□ 1.7
COL20A1-208ENST00000496810 CCDC88AQ3V6T2 1871 aa25.66■■□□□ 1.7
COL20A1-208ENST00000496810 HLFQ16534 295 aa25.66■■□□□ 1.7
COL20A1-208ENST00000496810 NGEFQ8N5V2 710 aa25.66■■□□□ 1.7
COL20A1-208ENST00000496810 CNBD1Q8NA66 436 aa25.66■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms