RNA–Protein interactions for RNA: ENST00000496804.5

MACF1-224, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 5

Gene MACF1, Length 5,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-224ENST00000496804 COG3Q96JB2 828 aa10.24□□□□□ -0.77
MACF1-224ENST00000496804 RRP15Q9Y3B9 282 aaKnown RBP10.24□□□□□ -0.77
MACF1-224ENST00000496804 BRD1O95696 1058 aa10.24□□□□□ -0.77
MACF1-224ENST00000496804 LRMPQ12912 555 aa10.24□□□□□ -0.77
MACF1-224ENST00000496804 OTUD6BQ8N6M0 293 aa10.24□□□□□ -0.77
MACF1-224ENST00000496804 CCDC141Q6ZP82 1450 aa10.24□□□□□ -0.77
MACF1-224ENST00000496804 NSD3Q9BZ95 1437 aa10.23□□□□□ -0.77
MACF1-224ENST00000496804 SAFBQ15424 915 aaKnown RBP eCLIP10.23□□□□□ -0.77
MACF1-224ENST00000496804 RAI14Q9P0K7 980 aa10.23□□□□□ -0.77
MACF1-224ENST00000496804 SYT1P21579 422 aa10.23□□□□□ -0.77
MACF1-224ENST00000496804 GGT6Q6P531 493 aa10.23□□□□□ -0.77
MACF1-224ENST00000496804 CCAR1Q8IX12 1150 aaKnown RBP10.23□□□□□ -0.77
MACF1-224ENST00000496804 ABCC5O15440 1437 aa10.23□□□□□ -0.77
MACF1-224ENST00000496804 SPATA31E1Q6ZUB1 1445 aa10.23□□□□□ -0.77
MACF1-224ENST00000496804 A0A1B0GUA9 196 aa10.23□□□□□ -0.77
MACF1-224ENST00000496804 RAB11FIP3O75154 756 aa10.23□□□□□ -0.77
MACF1-224ENST00000496804 ERC1Q8IUD2 1116 aa10.23□□□□□ -0.77
MACF1-224ENST00000496804 TEX2Q8IWB9 1127 aa10.23□□□□□ -0.77
MACF1-224ENST00000496804 AOPEPQ8N6M6 819 aa10.23□□□□□ -0.77
MACF1-224ENST00000496804 DDX54Q8TDD1 881 aaKnown RBP10.23□□□□□ -0.77
MACF1-224ENST00000496804 ESYT1Q9BSJ8 1104 aa10.23□□□□□ -0.77
MACF1-224ENST00000496804 TMEM51Q9NW97 253 aa10.23□□□□□ -0.77
MACF1-224ENST00000496804 MYO6Q9UM54 1294 aa10.23□□□□□ -0.77
MACF1-224ENST00000496804 KIAA1328Q86T90 577 aa10.23□□□□□ -0.77
MACF1-224ENST00000496804 PLEKHM2Q8IWE5 1019 aa10.23□□□□□ -0.77
MACF1-224ENST00000496804 CARD6Q9BX69 1037 aa10.23□□□□□ -0.77
MACF1-224ENST00000496804 NPM1P06748 294 aaKnown RBP eCLIP10.22□□□□□ -0.77
MACF1-224ENST00000496804 C16orf71Q8IYS4 520 aaPredicted RBP10.22□□□□□ -0.77
MACF1-224ENST00000496804 CEP112Q8N8E3 955 aa10.22□□□□□ -0.77
MACF1-224ENST00000496804 RBM33Q96EV2 1170 aaKnown RBP10.22□□□□□ -0.77
MACF1-224ENST00000496804 CABP2Q9NPB3 220 aa10.22□□□□□ -0.77
MACF1-224ENST00000496804 INCENPQ9NQS7 918 aa10.22□□□□□ -0.77
MACF1-224ENST00000496804 CTNNA3Q9UI47 895 aa10.22□□□□□ -0.77
MACF1-224ENST00000496804 NPHP3Q7Z494 1330 aa10.22□□□□□ -0.77
MACF1-224ENST00000496804 ERLIN2O94905 339 aa10.22□□□□□ -0.77
MACF1-224ENST00000496804 CD2BP2O95400 341 aaKnown RBP10.22□□□□□ -0.77
MACF1-224ENST00000496804 EIF2S2P20042 333 aaKnown RBP10.22□□□□□ -0.77
MACF1-224ENST00000496804 LRCH2Q5VUJ6 765 aa10.22□□□□□ -0.77
MACF1-224ENST00000496804 CBX8Q9HC52 389 aa10.22□□□□□ -0.77
MACF1-224ENST00000496804 ZNHIT6Q9NWK9 470 aaKnown RBP10.22□□□□□ -0.77
MACF1-224ENST00000496804 CTAGE15A4D2H0 777 aa10.22□□□□□ -0.77
MACF1-224ENST00000496804 BIN1O00499 593 aa10.22□□□□□ -0.77
MACF1-224ENST00000496804 DHX16O60231 1041 aaKnown RBP10.22□□□□□ -0.77
MACF1-224ENST00000496804 CTAGE8P0CG41 777 aa10.22□□□□□ -0.77
MACF1-224ENST00000496804 PPP2R3AQ06190 1150 aa10.22□□□□□ -0.77
MACF1-224ENST00000496804 CTAGE6Q86UF2 777 aa10.22□□□□□ -0.77
MACF1-224ENST00000496804 NUTM1Q86Y26 1132 aa10.22□□□□□ -0.77
MACF1-224ENST00000496804 CTAGE4Q8IX94 777 aa10.22□□□□□ -0.77
MACF1-224ENST00000496804 ZNF526Q8TF50 670 aaPredicted RBP10.22□□□□□ -0.77
MACF1-224ENST00000496804 MINK1Q8N4C8 1332 aaPredicted RBP10.22□□□□□ -0.77
MACF1-224ENST00000496804 PIP4K2AP48426 406 aaPredicted RBP10.22□□□□□ -0.77
MACF1-224ENST00000496804 RAD51AP2Q09MP3 1159 aa10.22□□□□□ -0.77
MACF1-224ENST00000496804 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.22□□□□□ -0.773e-7■■■□□ 15.1
MACF1-224ENST00000496804 C9orf84Q5VXU9 1444 aa10.21□□□□□ -0.77
MACF1-224ENST00000496804 FCHSD2O94868 740 aa10.21□□□□□ -0.77
MACF1-224ENST00000496804 SLC3A2P08195 630 aaKnown RBP10.21□□□□□ -0.77
MACF1-224ENST00000496804 MYO1CO00159 1063 aa10.21□□□□□ -0.77
MACF1-224ENST00000496804 TUBB4BP68371 445 aa10.21□□□□□ -0.77
MACF1-224ENST00000496804 TRDNQ13061 729 aa10.21□□□□□ -0.77
MACF1-224ENST00000496804 POTEDQ86YR6 584 aa10.21□□□□□ -0.77
MACF1-224ENST00000496804 CHAMP1Q96JM3 812 aa10.21□□□□□ -0.77
MACF1-224ENST00000496804 ARHGAP45Q92619 1136 aa10.21□□□□□ -0.78
MACF1-224ENST00000496804 PIK3C2GO75747 1445 aa10.21□□□□□ -0.78
MACF1-224ENST00000496804 KRT32Q14532 448 aa10.21□□□□□ -0.78
MACF1-224ENST00000496804 RPAINQ86UA6 219 aa10.21□□□□□ -0.78
MACF1-224ENST00000496804 DMRT2Q9Y5R5 561 aa10.21□□□□□ -0.78
MACF1-224ENST00000496804 MORC2Q9Y6X9 1032 aaPredicted RBP10.21□□□□□ -0.78
MACF1-224ENST00000496804 INPP5BP32019 993 aa10.2□□□□□ -0.78
MACF1-224ENST00000496804 UBASH3AP57075 661 aa10.2□□□□□ -0.78
MACF1-224ENST00000496804 LRRFIP1Q32MZ4 808 aaKnown RBP10.2□□□□□ -0.78
MACF1-224ENST00000496804 RALYLQ86SE5 291 aaKnown RBP10.2□□□□□ -0.78
MACF1-224ENST00000496804 CCDC47Q96A33 483 aaKnown RBP10.2□□□□□ -0.78
MACF1-224ENST00000496804 THUMPD2Q9BTF0 503 aaKnown RBP10.2□□□□□ -0.78
MACF1-224ENST00000496804 ELP1O95163 1332 aa10.2□□□□□ -0.78
MACF1-224ENST00000496804 IL16Q14005 1332 aa10.2□□□□□ -0.78
MACF1-224ENST00000496804 VGFO15240 615 aaPredicted RBP10.2□□□□□ -0.78
MACF1-224ENST00000496804 HSPA4P34932 840 aa10.2□□□□□ -0.78
MACF1-224ENST00000496804 NAA25Q14CX7 972 aa10.2□□□□□ -0.78
MACF1-224ENST00000496804 TSHZ3Q63HK5 1081 aa10.2□□□□□ -0.78
MACF1-224ENST00000496804 ASXL1Q8IXJ9 1541 aa10.2□□□□□ -0.78
MACF1-224ENST00000496804 GOLIM4O00461 696 aa10.2□□□□□ -0.78
MACF1-224ENST00000496804 SIL1Q9H173 461 aa10.2□□□□□ -0.78
MACF1-224ENST00000496804 USP16Q9Y5T5 823 aa10.2□□□□□ -0.78
MACF1-224ENST00000496804 TUBBP07437 444 aa10.2□□□□□ -0.78
MACF1-224ENST00000496804 PDE1AP54750 535 aa10.2□□□□□ -0.78
MACF1-224ENST00000496804 EIF5P55010 431 aaKnown RBP10.2□□□□□ -0.78
MACF1-224ENST00000496804 NFE2L2Q16236 605 aa10.2□□□□□ -0.78
MACF1-224ENST00000496804 AFAP1L1Q8TED9 768 aa10.2□□□□□ -0.78
MACF1-224ENST00000496804 RAD54L2Q9Y4B4 1467 aa10.19□□□□□ -0.78
MACF1-224ENST00000496804 SRGAP3O43295 1099 aa10.19□□□□□ -0.78
MACF1-224ENST00000496804 CPSF2Q9P2I0 782 aaKnown RBP10.19□□□□□ -0.78
MACF1-224ENST00000496804 RAD50Q92878 1312 aa10.19□□□□□ -0.78
MACF1-224ENST00000496804 LOC102724159A0A0B4J2E5 919 aa10.19□□□□□ -0.78
MACF1-224ENST00000496804 PWP2Q15269 919 aaKnown RBP10.19□□□□□ -0.78
MACF1-224ENST00000496804 CCDC30Q5VVM6 783 aa10.19□□□□□ -0.78
MACF1-224ENST00000496804 DCTPP1Q9H773 170 aa10.19□□□□□ -0.78
MACF1-224ENST00000496804 RNF216Q9NWF9 866 aaPredicted RBP10.19□□□□□ -0.78
MACF1-224ENST00000496804 SPG7Q9UQ90 795 aa10.19□□□□□ -0.78
MACF1-224ENST00000496804 NEBLO76041 1014 aa10.19□□□□□ -0.78
MACF1-224ENST00000496804 CCDC172P0C7W6 258 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms