RNA–Protein interactions for RNA: ENST00000496738.5

LMNA-216, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-216ENST00000496738 ASAP1Q9ULH1 1129 aa21.45■■□□□ 1.02
LMNA-216ENST00000496738 KCPQ6ZWJ8 1503 aa21.45■■□□□ 1.02
LMNA-216ENST00000496738 FKBP5Q13451 457 aaPredicted RBP21.45■■□□□ 1.02
LMNA-216ENST00000496738 PROSER3Q2NL68 480 aa21.45■■□□□ 1.02
LMNA-216ENST00000496738 ATRNO75882 1429 aa21.44■■□□□ 1.02
LMNA-216ENST00000496738 SNRPA1P09661 255 aaKnown RBP21.44■■□□□ 1.02
LMNA-216ENST00000496738 TRPC5Q9UL62 973 aaPredicted RBP21.44■■□□□ 1.02
LMNA-216ENST00000496738 USP16Q9Y5T5 823 aa21.44■■□□□ 1.02
LMNA-216ENST00000496738 UBR2Q8IWV8 1755 aa21.44■■□□□ 1.02
LMNA-216ENST00000496738 KAT6BQ8WYB5 2073 aa21.44■■□□□ 1.02
LMNA-216ENST00000496738 DDX19BQ9UMR2 479 aa21.43■■□□□ 1.02
LMNA-216ENST00000496738 BCL9O00512 1426 aa21.43■■□□□ 1.02
LMNA-216ENST00000496738 PIP4K2AP48426 406 aaPredicted RBP21.43■■□□□ 1.02
LMNA-216ENST00000496738 SLC4A10Q6U841 1118 aa21.43■■□□□ 1.02
LMNA-216ENST00000496738 THSD7AQ9UPZ6 1657 aa21.42■■□□□ 1.02
LMNA-216ENST00000496738 QTRT2Q9H974 415 aaKnown RBP21.42■■□□□ 1.02
LMNA-216ENST00000496738 DBF4Q9UBU7 674 aaPredicted RBP21.42■■□□□ 1.02
LMNA-216ENST00000496738 ATG3Q9NT62 314 aa21.41■■□□□ 1.02
LMNA-216ENST00000496738 FAM182BQ5T319 152 aa21.41■■□□□ 1.02
LMNA-216ENST00000496738 MYL6BP14649 208 aa21.4■■□□□ 1.02
LMNA-216ENST00000496738 RBM42Q9BTD8 480 aaKnown RBP21.4■■□□□ 1.02
LMNA-216ENST00000496738 CHMP4AQ9BY43 222 aa21.39■■□□□ 1.02
LMNA-216ENST00000496738 LAMB4A4D0S4 1761 aa21.38■■□□□ 1.01
LMNA-216ENST00000496738 PDIA6Q15084 440 aa21.38■■□□□ 1.01
LMNA-216ENST00000496738 CACNA1FO60840 1977 aa21.38■■□□□ 1.01
LMNA-216ENST00000496738 EIF5BO60841 1220 aaKnown RBP21.38■■□□□ 1.01
LMNA-216ENST00000496738 PCDHB15Q9Y5E8 787 aa21.38■■□□□ 1.01
LMNA-216ENST00000496738 KCNQ2O43526 872 aa21.37■■□□□ 1.01
LMNA-216ENST00000496738 AIMP1Q12904 312 aaKnown RBP21.37■■□□□ 1.01
LMNA-216ENST00000496738 INTS3Q68E01 1043 aaKnown RBP21.37■■□□□ 1.01
LMNA-216ENST00000496738 DDX21Q9NR30 783 aaKnown RBP eCLIP21.37■■□□□ 1.01
LMNA-216ENST00000496738 SEPT12Q8IYM1 358 aa21.36■■□□□ 1.01
LMNA-216ENST00000496738 C1orf115Q9H7X2 142 aa21.36■■□□□ 1.01
LMNA-216ENST00000496738 ZBTB7BO15156 539 aaPredicted RBP21.36■■□□□ 1.01
LMNA-216ENST00000496738 ZBTB40Q9NUA8 1239 aa21.35■■□□□ 1.01
LMNA-216ENST00000496738 HYPKQ9NX55 129 aa21.35■■□□□ 1.01
LMNA-216ENST00000496738 DAXXQ9UER7 740 aaPredicted RBP21.35■■□□□ 1.01
LMNA-216ENST00000496738 PI4KAP2A4QPH2 592 aa21.34■■□□□ 1.01
LMNA-216ENST00000496738 IGHDP01880 384 aa21.34■■□□□ 1.01
LMNA-216ENST00000496738 PI4KAP1Q8N8J0 262 aa21.34■■□□□ 1.01
LMNA-216ENST00000496738 DNAJC10Q8IXB1 793 aa21.34■■□□□ 1.01
LMNA-216ENST00000496738 A1BGP04217 495 aa21.33■■□□□ 1.01
LMNA-216ENST00000496738 PTF1AQ7RTS3 328 aa21.33■■□□□ 1
LMNA-216ENST00000496738 FBXO41Q8TF61 875 aa21.33■■□□□ 1
LMNA-216ENST00000496738 SLC4A9Q96Q91 983 aa21.33■■□□□ 1
LMNA-216ENST00000496738 ADCY9O60503 1353 aa21.32■■□□□ 1
LMNA-216ENST00000496738 AAMPQ13685 434 aa21.32■■□□□ 1
LMNA-216ENST00000496738 XAGE3Q8WTP9 111 aa21.32■■□□□ 1
LMNA-216ENST00000496738 KDM2BQ8NHM5 1336 aa21.31■■□□□ 1
LMNA-216ENST00000496738 ONECUT3O60422 494 aaPredicted RBP21.31■■□□□ 1
LMNA-216ENST00000496738 CCT4P50991 539 aaKnown RBP21.31■■□□□ 1
LMNA-216ENST00000496738 NBPF26B4DH59 902 aa21.31■■□□□ 1
LMNA-216ENST00000496738 NBPF14Q5TI25 921 aa21.31■■□□□ 1
LMNA-216ENST00000496738 NBPF10Q6P3W6 841 aaKnown RBP21.31■■□□□ 1
LMNA-216ENST00000496738 NBPF15Q8N660 670 aa21.31■■□□□ 1
LMNA-216ENST00000496738 COPS6Q7L5N1 327 aa21.3■■□□□ 1
LMNA-216ENST00000496738 MEIS3Q99687 375 aa21.3■■□□□ 1
LMNA-216ENST00000496738 MAP3K2Q9Y2U5 619 aa21.3■■□□□ 1
LMNA-216ENST00000496738 LRP10Q7Z4F1 713 aa21.3■■□□□ 1
LMNA-216ENST00000496738 DNAAF4Q8WXU2 420 aa21.3■■□□□ 1
LMNA-216ENST00000496738 SKAP1Q86WV1 359 aa21.29■■□□□ 1
LMNA-216ENST00000496738 PXDNLA1KZ92 1463 aa21.28■■□□□ 1
LMNA-216ENST00000496738 CENPQQ7L2Z9 268 aaPredicted RBP21.28■■□□□ 1
LMNA-216ENST00000496738 VSIG10Q8N0Z9 540 aa21.28■■□□□ 1
LMNA-216ENST00000496738 ZNF330Q9Y3S2 320 aaPredicted RBP21.28■■□□□ 1
LMNA-216ENST00000496738 ZNF772Q68DY9 489 aaPredicted RBP21.28■■□□□ 1
LMNA-216ENST00000496738 KSR2Q6VAB6 950 aa21.28■■□□□ 1
LMNA-216ENST00000496738 CHMP4BQ9H444 224 aaKnown RBP21.28■■□□□ 1
LMNA-216ENST00000496738 PALLDQ8WX93 1383 aa21.27■■□□□ 1
LMNA-216ENST00000496738 RIC3Q7Z5B4 369 aa21.27■■□□□ 1
LMNA-216ENST00000496738 TJP1Q07157 1748 aa21.27■□□□□ 0.99
LMNA-216ENST00000496738 DDX58O95786 925 aaKnown RBP21.26■□□□□ 0.99
LMNA-216ENST00000496738 N4BP2Q86UW6 1770 aaPredicted RBP21.26■□□□□ 0.99
LMNA-216ENST00000496738 BEND3Q5T5X7 828 aa21.26■□□□□ 0.99
LMNA-216ENST00000496738 SRCIN1Q9C0H9 1055 aa21.26■□□□□ 0.99
LMNA-216ENST00000496738 ERBB4Q15303 1308 aa21.25■□□□□ 0.99
LMNA-216ENST00000496738 TEX13AQ9BXU3 409 aaPredicted RBP21.25■□□□□ 0.99
LMNA-216ENST00000496738 STARD3NLO95772 234 aa21.24■□□□□ 0.99
LMNA-216ENST00000496738 ATP6V1AP38606 617 aa21.24■□□□□ 0.99
LMNA-216ENST00000496738 RWDD1Q9H446 243 aaPredicted RBP21.24■□□□□ 0.99
LMNA-216ENST00000496738 BRWD3Q6RI45 1802 aa21.24■□□□□ 0.99
LMNA-216ENST00000496738 LOC102724428A0A0B4J2F2 783 aa21.24■□□□□ 0.99
LMNA-216ENST00000496738 CYP19A1P11511 503 aaPredicted RBP21.24■□□□□ 0.99
LMNA-216ENST00000496738 SIK1P57059 783 aa21.24■□□□□ 0.99
LMNA-216ENST00000496738 CWF19L2Q2TBE0 894 aaKnown RBP21.24■□□□□ 0.99
LMNA-216ENST00000496738 NHSQ6T4R5 1651 aa21.24■□□□□ 0.99
LMNA-216ENST00000496738 TTLL7Q6ZT98 887 aa21.23■□□□□ 0.99
LMNA-216ENST00000496738 KCNQ4P56696 695 aa21.23■□□□□ 0.99
LMNA-216ENST00000496738 RBM6P78332 1123 aaKnown RBP21.23■□□□□ 0.99
LMNA-216ENST00000496738 ANKRD13DQ6ZTN6 518 aa21.23■□□□□ 0.99
LMNA-216ENST00000496738 BTAF1O14981 1849 aa21.22■□□□□ 0.99
LMNA-216ENST00000496738 ITPK1Q13572 414 aa21.21■□□□□ 0.99
LMNA-216ENST00000496738 ATP10DQ9P241 1426 aa21.21■□□□□ 0.99
LMNA-216ENST00000496738 KRT27Q7Z3Y8 459 aa21.21■□□□□ 0.99
LMNA-216ENST00000496738 SMARCC1Q92922 1105 aaPredicted RBP21.21■□□□□ 0.99
LMNA-216ENST00000496738 MYD88Q99836 296 aa21.21■□□□□ 0.99
LMNA-216ENST00000496738 USP44Q9H0E7 712 aa21.21■□□□□ 0.99
LMNA-216ENST00000496738 ZBTB1Q9Y2K1 713 aa21.21■□□□□ 0.99
LMNA-216ENST00000496738 SIRT2Q8IXJ6 389 aa21.2■□□□□ 0.99
LMNA-216ENST00000496738 ARXQ96QS3 562 aa21.2■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms