RNA–Protein interactions for RNA: ENST00000496723.1

CD46-218, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-218ENST00000496723 COL8A1P27658 744 aa8.17□□□□□ -1.1
CD46-218ENST00000496723 SEMA3FQ13275 785 aa8.17□□□□□ -1.1
CD46-218ENST00000496723 NBPF1Q3BBV0 1214 aa8.17□□□□□ -1.1
CD46-218ENST00000496723 FAM182BQ5T319 152 aa8.17□□□□□ -1.1
CD46-218ENST00000496723 PLPP7Q8NBV4 271 aa8.17□□□□□ -1.1
CD46-218ENST00000496723 BTBD6Q96KE9 485 aa8.17□□□□□ -1.1
CD46-218ENST00000496723 SLC4A9Q96Q91 983 aa8.17□□□□□ -1.1
CD46-218ENST00000496723 GDPD2Q9HCC8 539 aa8.17□□□□□ -1.1
CD46-218ENST00000496723 AVENQ9NQS1 362 aaPredicted RBP8.17□□□□□ -1.1
CD46-218ENST00000496723 CDK2AP1O14519 115 aa8.16□□□□□ -1.1
CD46-218ENST00000496723 ATXN7O15265 892 aaPredicted RBP8.16□□□□□ -1.1
CD46-218ENST00000496723 AIDAQ96BJ3 306 aa8.16□□□□□ -1.1
CD46-218ENST00000496723 ABL2P42684 1182 aa8.15□□□□□ -1.1
CD46-218ENST00000496723 MTFR1Q15390 333 aa8.15□□□□□ -1.1
CD46-218ENST00000496723 ARSJQ5FYB0 599 aaPredicted RBP8.15□□□□□ -1.1
CD46-218ENST00000496723 ZDHHC3Q9NYG2 299 aa8.15□□□□□ -1.1
CD46-218ENST00000496723 NOP53Q9NZM5 478 aaKnown RBP8.15□□□□□ -1.1
CD46-218ENST00000496723 A0A1W2PNR3 127 aa8.14□□□□□ -1.11
CD46-218ENST00000496723 K7ELQ4 463 aaPredicted RBP8.14□□□□□ -1.11
CD46-218ENST00000496723 TATP17735 454 aaPredicted RBP8.14□□□□□ -1.11
CD46-218ENST00000496723 ADH6P28332 368 aa8.14□□□□□ -1.11
CD46-218ENST00000496723 BAG6P46379 1132 aa8.14□□□□□ -1.11
CD46-218ENST00000496723 TNP2Q05952 138 aa8.14□□□□□ -1.11
CD46-218ENST00000496723 ZNF295-AS1Q8N0V1 137 aa8.14□□□□□ -1.11
CD46-218ENST00000496723 IQSEC3Q9UPP2 1182 aaPredicted RBP8.14□□□□□ -1.11
CD46-218ENST00000496723 A6NJY4 79 aa8.13□□□□□ -1.11
CD46-218ENST00000496723 NEURL1BA8MQ27 555 aa8.13□□□□□ -1.11
CD46-218ENST00000496723 DGKGP49619 791 aa8.13□□□□□ -1.11
CD46-218ENST00000496723 MCM6Q14566 821 aa8.13□□□□□ -1.11
CD46-218ENST00000496723 TMEM229AB2RXF0 380 aa8.12□□□□□ -1.11
CD46-218ENST00000496723 BACH1O14867 736 aa8.12□□□□□ -1.11
CD46-218ENST00000496723 LZTS3O60299 673 aaPredicted RBP8.12□□□□□ -1.11
CD46-218ENST00000496723 MAPTP10636 758 aaKnown RBP8.12□□□□□ -1.11
CD46-218ENST00000496723 GRIN2CQ14957 1233 aa8.12□□□□□ -1.11
CD46-218ENST00000496723 SERTAD1Q9UHV2 236 aa8.12□□□□□ -1.11
CD46-218ENST00000496723 FAM157BP0CG42 384 aa8.11□□□□□ -1.11
CD46-218ENST00000496723 SAMD5Q5TGI4 173 aa8.11□□□□□ -1.11
CD46-218ENST00000496723 SUV39H2Q9H5I1 410 aa8.11□□□□□ -1.11
CD46-218ENST00000496723 PCDHGA11Q9Y5H2 935 aa8.11□□□□□ -1.11
CD46-218ENST00000496723 FLIIQ13045 1269 aa8.1□□□□□ -1.11
CD46-218ENST00000496723 LAMC2Q13753 1193 aa8.1□□□□□ -1.11
CD46-218ENST00000496723 CHSY3Q70JA7 882 aa8.1□□□□□ -1.11
CD46-218ENST00000496723 NFATC2IPQ8NCF5 419 aa8.1□□□□□ -1.11
CD46-218ENST00000496723 ZIC5Q96T25 663 aa8.1□□□□□ -1.11
CD46-218ENST00000496723 GJA3Q9Y6H8 435 aa8.1□□□□□ -1.11
CD46-218ENST00000496723 DCDC2BA2VCK2 349 aa8.09□□□□□ -1.11
CD46-218ENST00000496723 KHNYNO15037 678 aaKnown RBP8.09□□□□□ -1.11
CD46-218ENST00000496723 CD33P20138 364 aa8.09□□□□□ -1.11
CD46-218ENST00000496723 EML3Q32P44 896 aa8.09□□□□□ -1.11
CD46-218ENST00000496723 ZNF468Q5VIY5 522 aaPredicted RBP8.09□□□□□ -1.11
CD46-218ENST00000496723 CABP1Q9NZU7 370 aa8.09□□□□□ -1.11
CD46-218ENST00000496723 KLF15Q9UIH9 416 aa8.09□□□□□ -1.11
CD46-218ENST00000496723 C1QTNF9BB2RNN3 333 aa8.08□□□□□ -1.12
CD46-218ENST00000496723 FCHSD1Q86WN1 690 aa8.08□□□□□ -1.12
CD46-218ENST00000496723 SCHIP1Q9P0W5 487 aaPredicted RBP8.08□□□□□ -1.12
CD46-218ENST00000496723 HCN2Q9UL51 889 aa8.08□□□□□ -1.12
CD46-218ENST00000496723 PRR12Q9ULL5 1215 aa8.08□□□□□ -1.12
CD46-218ENST00000496723 NOD1Q9Y239 953 aa8.08□□□□□ -1.12
CD46-218ENST00000496723 EFSO43281 561 aa8.07□□□□□ -1.12
CD46-218ENST00000496723 XP32Q5T750 250 aa8.07□□□□□ -1.12
CD46-218ENST00000496723 BICDL1Q6ZP65 573 aa8.07□□□□□ -1.12
CD46-218ENST00000496723 CD163Q86VB7 1156 aa8.07□□□□□ -1.12
CD46-218ENST00000496723 MARK1Q9P0L2 795 aa8.07□□□□□ -1.12
CD46-218ENST00000496723 FURINP09958 794 aa8.06□□□□□ -1.12
CD46-218ENST00000496723 GPC6Q9Y625 555 aaPredicted RBP8.06□□□□□ -1.12
CD46-218ENST00000496723 UBTFP17480 764 aaKnown RBP8.05□□□□□ -1.12
CD46-218ENST00000496723 GTF2IP78347 998 aa8.05□□□□□ -1.12
CD46-218ENST00000496723 TEAD4Q15561 434 aa8.05□□□□□ -1.12
CD46-218ENST00000496723 WWC1Q8IX03 1113 aa8.05□□□□□ -1.12
CD46-218ENST00000496723 ALG2Q9H553 416 aa8.05□□□□□ -1.12
CD46-218ENST00000496723 USP3Q9Y6I4 520 aa8.05□□□□□ -1.12
CD46-218ENST00000496723 PIK3CDO00329 1044 aa8.04□□□□□ -1.12
CD46-218ENST00000496723 SKIP12755 728 aa8.04□□□□□ -1.12
CD46-218ENST00000496723 ALAS2P22557 587 aa8.04□□□□□ -1.12
CD46-218ENST00000496723 PCBP4P57723 403 aaKnown RBP8.04□□□□□ -1.12
CD46-218ENST00000496723 L3MBTL2Q969R5 705 aa8.04□□□□□ -1.12
CD46-218ENST00000496723 COG6Q9Y2V7 657 aa8.04□□□□□ -1.12
CD46-218ENST00000496723 ELOA3CA0A087WX78 387 aaPredicted RBP8.03□□□□□ -1.12
CD46-218ENST00000496723 ELOA3DA6NLF2 546 aaPredicted RBP8.03□□□□□ -1.12
CD46-218ENST00000496723 PSME1Q06323 249 aa8.03□□□□□ -1.12
CD46-218ENST00000496723 ELOA3BQ3SY89 546 aa8.03□□□□□ -1.12
CD46-218ENST00000496723 ELOA3Q8NG57 546 aa8.03□□□□□ -1.12
CD46-218ENST00000496723 POM121Q96HA1 1249 aa8.03□□□□□ -1.12
CD46-218ENST00000496723 ZNF358Q9NW07 568 aa8.03□□□□□ -1.12
CD46-218ENST00000496723 GTF3C3Q9Y5Q9 886 aa8.03□□□□□ -1.12
CD46-218ENST00000496723 PARP3Q9Y6F1 533 aa8.03□□□□□ -1.12
CD46-218ENST00000496723 SPDYE3A6NKU9 549 aa8.02□□□□□ -1.13
CD46-218ENST00000496723 EML1O00423 815 aa8.02□□□□□ -1.13
CD46-218ENST00000496723 RAD21O60216 631 aa8.02□□□□□ -1.13
CD46-218ENST00000496723 SPATA31C1P0DKV0 1188 aa8.02□□□□□ -1.13
CD46-218ENST00000496723 NOS2P35228 1153 aa8.02□□□□□ -1.13
CD46-218ENST00000496723 CHRNA4P43681 627 aa8.02□□□□□ -1.13
CD46-218ENST00000496723 NEUROD4Q9HD90 331 aa8.02□□□□□ -1.13
CD46-218ENST00000496723 STRN4Q9NRL3 753 aa8.02□□□□□ -1.13
CD46-218ENST00000496723 SIN3BO75182 1162 aa8.01□□□□□ -1.13
CD46-218ENST00000496723 TXLNAP40222 546 aa8.01□□□□□ -1.13
CD46-218ENST00000496723 EPHA4P54764 986 aa8.01□□□□□ -1.13
CD46-218ENST00000496723 NCOA4Q13772 614 aa8.01□□□□□ -1.13
CD46-218ENST00000496723 TRIM50Q86XT4 487 aa8.01□□□□□ -1.13
CD46-218ENST00000496723 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms