RNA–Protein interactions for RNA: ENST00000496574.6

PKD1-222, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 4,419 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-222ENST00000496574 V9GYY5 206 aaPredicted RBP16.54■□□□□ 0.24
PKD1-222ENST00000496574 ZNF500O60304 480 aaPredicted RBP16.53■□□□□ 0.24
PKD1-222ENST00000496574 SLU7O95391 586 aaKnown RBP16.53■□□□□ 0.24
PKD1-222ENST00000496574 ZNF397Q8NF99 534 aaPredicted RBP16.53■□□□□ 0.24
PKD1-222ENST00000496574 DMRT2Q9Y5R5 561 aa16.53■□□□□ 0.24
PKD1-222ENST00000496574 LMAN1P49257 510 aa16.53■□□□□ 0.24
PKD1-222ENST00000496574 DNM1Q05193 864 aaKnown RBP16.53■□□□□ 0.24
PKD1-222ENST00000496574 MRPL50Q8N5N7 158 aaKnown RBP16.53■□□□□ 0.24
PKD1-222ENST00000496574 LMBRD1Q9NUN5 540 aa16.53■□□□□ 0.24
PKD1-222ENST00000496574 GPATCH8Q9UKJ3 1502 aaKnown RBP16.53■□□□□ 0.24
PKD1-222ENST00000496574 KIF5CO60282 957 aa16.52■□□□□ 0.24
PKD1-222ENST00000496574 HSP90AB3PQ58FF7 597 aa16.52■□□□□ 0.24
PKD1-222ENST00000496574 RAPGEF4Q8WZA2 1011 aa16.52■□□□□ 0.24
PKD1-222ENST00000496574 ARHGEF12Q9NZN5 1544 aa16.52■□□□□ 0.24
PKD1-222ENST00000496574 CFAP43Q8NDM7 1665 aa16.52■□□□□ 0.24
PKD1-222ENST00000496574 TRIM22Q8IYM9 498 aa16.52■□□□□ 0.23
PKD1-222ENST00000496574 CCDC150Q8NCX0 1101 aa16.52■□□□□ 0.23
PKD1-222ENST00000496574 TYRO3Q06418 890 aa16.52■□□□□ 0.23
PKD1-222ENST00000496574 TXLNBQ8N3L3 684 aa16.52■□□□□ 0.23
PKD1-222ENST00000496574 BOLA2Q9H3K6 86 aa16.52■□□□□ 0.23
PKD1-222ENST00000496574 STK11IPQ8N1F8 1099 aa16.51■□□□□ 0.23
PKD1-222ENST00000496574 UHRF1BP1Q6BDS2 1440 aa16.51■□□□□ 0.23
PKD1-222ENST00000496574 PSME1Q06323 249 aa16.51■□□□□ 0.23
PKD1-222ENST00000496574 PLEKHO1Q53GL0 409 aaPredicted RBP16.51■□□□□ 0.23
PKD1-222ENST00000496574 CTNNA3Q9UI47 895 aa16.51■□□□□ 0.23
PKD1-222ENST00000496574 CDKL5O76039 1030 aa16.51■□□□□ 0.23
PKD1-222ENST00000496574 SLC3A2P08195 630 aaKnown RBP16.51■□□□□ 0.23
PKD1-222ENST00000496574 GUCY1B3Q02153 619 aa16.51■□□□□ 0.23
PKD1-222ENST00000496574 CCDC181Q5TID7 509 aa16.51■□□□□ 0.23
PKD1-222ENST00000496574 COL17A1Q9UMD9 1497 aaPredicted RBP16.51■□□□□ 0.23
PKD1-222ENST00000496574 GOLGA6L10A6NI86 522 aa16.5■□□□□ 0.23
PKD1-222ENST00000496574 TXLNAP40222 546 aa16.5■□□□□ 0.23
PKD1-222ENST00000496574 FLIIQ13045 1269 aa16.5■□□□□ 0.23
PKD1-222ENST00000496574 ANTXR1Q9H6X2 564 aa16.5■□□□□ 0.23
PKD1-222ENST00000496574 TBC1D2BQ9UPU7 963 aa16.5■□□□□ 0.23
PKD1-222ENST00000496574 CCDC61Q9Y6R9 512 aa16.5■□□□□ 0.23
PKD1-222ENST00000496574 NECAB1Q8N987 351 aa16.5■□□□□ 0.23
PKD1-222ENST00000496574 ECHDC1Q9NTX5 307 aa16.5■□□□□ 0.23
PKD1-222ENST00000496574 IQCEQ6IPM2 695 aa16.5■□□□□ 0.23
PKD1-222ENST00000496574 DNAJC25Q9H1X3 360 aa16.5■□□□□ 0.23
PKD1-222ENST00000496574 BIN1O00499 593 aa16.5■□□□□ 0.23
PKD1-222ENST00000496574 RIOK3O14730 519 aaKnown RBP16.5■□□□□ 0.23
PKD1-222ENST00000496574 CCAR1Q8IX12 1150 aaKnown RBP16.5■□□□□ 0.23
PKD1-222ENST00000496574 CARD14Q9BXL6 1004 aa16.5■□□□□ 0.23
PKD1-222ENST00000496574 GOLGA6L9A6NEM1 432 aa16.49■□□□□ 0.23
PKD1-222ENST00000496574 GTF2E1P29083 439 aaPredicted RBP16.49■□□□□ 0.23
PKD1-222ENST00000496574 VPS53Q5VIR6 699 aa16.49■□□□□ 0.23
PKD1-222ENST00000496574 FAM83GA6ND36 823 aa16.49■□□□□ 0.23
PKD1-222ENST00000496574 U2AF2P26368 475 aaKnown RBP eCLIP16.49■□□□□ 0.235e-8■■■■■ 34.6
PKD1-222ENST00000496574 MAP9Q49MG5 647 aa16.49■□□□□ 0.23
PKD1-222ENST00000496574 CCDC158Q5M9N0 1113 aa16.49■□□□□ 0.23
PKD1-222ENST00000496574 ARFGAP3Q9NP61 516 aa16.49■□□□□ 0.23
PKD1-222ENST00000496574 ZMYM3Q14202 1370 aa16.49■□□□□ 0.23
PKD1-222ENST00000496574 GNG11P61952 73 aa16.48■□□□□ 0.23
PKD1-222ENST00000496574 C17orf53Q8N3J3 647 aaPredicted RBP16.48■□□□□ 0.23
PKD1-222ENST00000496574 CCDC148Q8NFR7 591 aa16.48■□□□□ 0.23
PKD1-222ENST00000496574 C8orf76Q96K31 380 aa16.48■□□□□ 0.23
PKD1-222ENST00000496574 DNAI1Q9UI46 699 aa16.48■□□□□ 0.23
PKD1-222ENST00000496574 ANKRD36BQ8N2N9 1353 aa16.48■□□□□ 0.23
PKD1-222ENST00000496574 VAMP4O75379 141 aa16.48■□□□□ 0.23
PKD1-222ENST00000496574 TMEM63CQ9P1W3 806 aa16.48■□□□□ 0.23
PKD1-222ENST00000496574 U3KPZ7 1027 aaPredicted RBP16.48■□□□□ 0.23
PKD1-222ENST00000496574 SHTN1A0MZ66 631 aa16.48■□□□□ 0.23
PKD1-222ENST00000496574 RRP12Q5JTH9 1297 aaKnown RBP16.48■□□□□ 0.23
PKD1-222ENST00000496574 NME9Q86XW9 330 aa16.48■□□□□ 0.23
PKD1-222ENST00000496574 ABTB2Q8N961 1025 aa16.48■□□□□ 0.23
PKD1-222ENST00000496574 EVI5LQ96CN4 794 aa16.48■□□□□ 0.23
PKD1-222ENST00000496574 ZBTB7BO15156 539 aaPredicted RBP16.48■□□□□ 0.23
PKD1-222ENST00000496574 NPHP3Q7Z494 1330 aa16.47■□□□□ 0.23
PKD1-222ENST00000496574 GNAT3A8MTJ3 354 aa16.47■□□□□ 0.23
PKD1-222ENST00000496574 TAF7Q15545 349 aaPredicted RBP16.47■□□□□ 0.23
PKD1-222ENST00000496574 FAM107BQ9H098 131 aa16.47■□□□□ 0.23
PKD1-222ENST00000496574 ZSCAN16Q9H4T2 348 aaPredicted RBP16.47■□□□□ 0.23
PKD1-222ENST00000496574 HMGB1P09429 215 aaKnown RBP16.47■□□□□ 0.23
PKD1-222ENST00000496574 C8orf58Q8NAV2 365 aa16.47■□□□□ 0.23
PKD1-222ENST00000496574 TRIM34Q9BYJ4 488 aa16.47■□□□□ 0.23
PKD1-222ENST00000496574 PZPP20742 1482 aa16.47■□□□□ 0.23
PKD1-222ENST00000496574 POTEB2H3BUK9 544 aa16.47■□□□□ 0.23
PKD1-222ENST00000496574 ZNF530Q6P9A1 599 aaPredicted RBP16.47■□□□□ 0.23
PKD1-222ENST00000496574 C14orf93Q9H972 538 aaKnown RBP16.47■□□□□ 0.23
PKD1-222ENST00000496574 NPC1L1Q9UHC9 1359 aa16.46■□□□□ 0.23
PKD1-222ENST00000496574 URB2Q14146 1524 aaKnown RBP16.46■□□□□ 0.23
PKD1-222ENST00000496574 TMX1Q9H3N1 280 aa16.46■□□□□ 0.23
PKD1-222ENST00000496574 STIM1Q13586 685 aa16.46■□□□□ 0.23
PKD1-222ENST00000496574 PPP1R42Q7Z4L9 355 aa16.46■□□□□ 0.23
PKD1-222ENST00000496574 CCDC8Q9H0W5 538 aaPredicted RBP16.46■□□□□ 0.23
PKD1-222ENST00000496574 CENPHQ9H3R5 247 aa16.46■□□□□ 0.23
PKD1-222ENST00000496574 GABPB1Q06547 395 aaPredicted RBP16.46■□□□□ 0.22
PKD1-222ENST00000496574 LUZP1Q86V48 1076 aa16.46■□□□□ 0.22
PKD1-222ENST00000496574 NUDT16Q96DE0 195 aaKnown RBP16.46■□□□□ 0.22
PKD1-222ENST00000496574 FAM135AQ9P2D6 1515 aa16.45■□□□□ 0.22
PKD1-222ENST00000496574 TUBB4AP04350 444 aa16.45■□□□□ 0.22
PKD1-222ENST00000496574 SYT1P21579 422 aa16.45■□□□□ 0.22
PKD1-222ENST00000496574 CEP85Q6P2H3 762 aa16.45■□□□□ 0.22
PKD1-222ENST00000496574 TSC1Q92574 1164 aa16.45■□□□□ 0.22
PKD1-222ENST00000496574 SMARCC1Q92922 1105 aaPredicted RBP16.45■□□□□ 0.22
PKD1-222ENST00000496574 KIF14Q15058 1648 aa16.45■□□□□ 0.22
PKD1-222ENST00000496574 TTC39AQ5SRH9 613 aa16.45■□□□□ 0.22
PKD1-222ENST00000496574 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.45■□□□□ 0.222e-6■■■■□ 24.1
PKD1-222ENST00000496574 ZSWIM4Q9H7M6 989 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms