RNA–Protein interactions for RNA: ENST00000496215.5

COL9A2-211, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-211ENST00000496215 SOS1Q07889 1333 aaPredicted RBP27.3■■□□□ 1.96
COL9A2-211ENST00000496215 ZBTB1Q9Y2K1 713 aa27.29■■□□□ 1.96
COL9A2-211ENST00000496215 CD2APQ9Y5K6 639 aa27.29■■□□□ 1.96
COL9A2-211ENST00000496215 USP42Q9H9J4 1324 aaKnown RBP27.29■■□□□ 1.96
COL9A2-211ENST00000496215 COL15A1P39059 1388 aa27.27■■□□□ 1.96
COL9A2-211ENST00000496215 LAMB4A4D0S4 1761 aa27.27■■□□□ 1.96
COL9A2-211ENST00000496215 STARD3NLO95772 234 aa27.26■■□□□ 1.95
COL9A2-211ENST00000496215 YBX3P16989 372 aaKnown RBP eCLIP27.26■■□□□ 1.95
COL9A2-211ENST00000496215 YY1P25490 414 aa27.26■■□□□ 1.95
COL9A2-211ENST00000496215 NLGN1Q8N2Q7 840 aa27.25■■□□□ 1.95
COL9A2-211ENST00000496215 TEX13AQ9BXU3 409 aaPredicted RBP27.25■■□□□ 1.95
COL9A2-211ENST00000496215 CHD4Q14839 1912 aa27.25■■□□□ 1.95
COL9A2-211ENST00000496215 SCN7AQ01118 1682 aa27.24■■□□□ 1.95
COL9A2-211ENST00000496215 FKBP8Q14318 412 aa27.24■■□□□ 1.95
COL9A2-211ENST00000496215 GPR162Q16538 588 aa27.24■■□□□ 1.95
COL9A2-211ENST00000496215 C10orf71Q711Q0 1435 aa27.24■■□□□ 1.95
COL9A2-211ENST00000496215 PELP1Q8IZL8 1130 aaKnown RBP27.23■■□□□ 1.95
COL9A2-211ENST00000496215 TAF7Q15545 349 aaPredicted RBP27.22■■□□□ 1.95
COL9A2-211ENST00000496215 N4BP2Q86UW6 1770 aaPredicted RBP27.22■■□□□ 1.95
COL9A2-211ENST00000496215 PXDNLA1KZ92 1463 aa27.21■■□□□ 1.95
COL9A2-211ENST00000496215 PRAMEF22A3QJZ6 481 aa27.21■■□□□ 1.95
COL9A2-211ENST00000496215 DDR1Q08345 913 aa27.21■■□□□ 1.95
COL9A2-211ENST00000496215 CANXP27824 592 aaKnown RBP27.2■■□□□ 1.94
COL9A2-211ENST00000496215 USPL1Q5W0Q7 1092 aa27.2■■□□□ 1.94
COL9A2-211ENST00000496215 CCDC146Q8IYE0 955 aa27.2■■□□□ 1.94
COL9A2-211ENST00000496215 LMOD3Q0VAK6 560 aa27.19■■□□□ 1.94
COL9A2-211ENST00000496215 PNISRQ8TF01 805 aaKnown RBP27.19■■□□□ 1.94
COL9A2-211ENST00000496215 THUMPD2Q9BTF0 503 aaKnown RBP27.19■■□□□ 1.94
COL9A2-211ENST00000496215 BCL2L12Q9HB09 334 aa27.19■■□□□ 1.94
COL9A2-211ENST00000496215 ZPR1O75312 459 aa27.18■■□□□ 1.94
COL9A2-211ENST00000496215 EIF5P55010 431 aaKnown RBP27.18■■□□□ 1.94
COL9A2-211ENST00000496215 RIPK4P57078 832 aa27.18■■□□□ 1.94
COL9A2-211ENST00000496215 RUNDC1Q96C34 613 aa27.18■■□□□ 1.94
COL9A2-211ENST00000496215 TMPOP42166 694 aaKnown RBP27.17■■□□□ 1.94
COL9A2-211ENST00000496215 MIS18AQ9NYP9 233 aa27.17■■□□□ 1.94
COL9A2-211ENST00000496215 NARFQ9UHQ1 456 aa27.17■■□□□ 1.94
COL9A2-211ENST00000496215 WWC3Q9ULE0 1092 aa27.17■■□□□ 1.94
COL9A2-211ENST00000496215 ADAMTS8Q9UP79 889 aa27.17■■□□□ 1.94
COL9A2-211ENST00000496215 BCORQ6W2J9 1755 aa27.17■■□□□ 1.94
COL9A2-211ENST00000496215 AFDNP55196 1824 aaKnown RBP27.16■■□□□ 1.94
COL9A2-211ENST00000496215 A1BGP04217 495 aa27.16■■□□□ 1.94
COL9A2-211ENST00000496215 SNRPA1P09661 255 aaKnown RBP27.16■■□□□ 1.94
COL9A2-211ENST00000496215 TM4SF1P30408 202 aa27.16■■□□□ 1.94
COL9A2-211ENST00000496215 USP16Q9Y5T5 823 aa27.16■■□□□ 1.94
COL9A2-211ENST00000496215 PARP3Q9Y6F1 533 aa27.16■■□□□ 1.94
COL9A2-211ENST00000496215 BRCA1P38398 1863 aaKnown RBP27.15■■□□□ 1.94
COL9A2-211ENST00000496215 NRXN2Q9P2S2 1712 aa27.15■■□□□ 1.94
COL9A2-211ENST00000496215 POLRMTO00411 1230 aaKnown RBP27.14■■□□□ 1.94
COL9A2-211ENST00000496215 RRP7AQ9Y3A4 280 aaKnown RBP27.14■■□□□ 1.94
COL9A2-211ENST00000496215 ZNF330Q9Y3S2 320 aaPredicted RBP27.14■■□□□ 1.94
COL9A2-211ENST00000496215 A0A087WZG4 1122 aa27.13■■□□□ 1.93
COL9A2-211ENST00000496215 PIP4K2AP48426 406 aaPredicted RBP27.13■■□□□ 1.93
COL9A2-211ENST00000496215 IL6STP40189 918 aaPredicted RBP27.12■■□□□ 1.93
COL9A2-211ENST00000496215 ANP32CO43423 234 aa27.11■■□□□ 1.93
COL9A2-211ENST00000496215 NFIXQ14938 502 aa27.11■■□□□ 1.93
COL9A2-211ENST00000496215 NEUROD2Q15784 382 aa27.11■■□□□ 1.93
COL9A2-211ENST00000496215 NPM2Q86SE8 214 aaKnown RBP27.11■■□□□ 1.93
COL9A2-211ENST00000496215 A0A0G2JLW4 131 aa27.09■■□□□ 1.93
COL9A2-211ENST00000496215 TSPYL4Q9UJ04 414 aa27.08■■□□□ 1.93
COL9A2-211ENST00000496215 TBC1D2BQ9UPU7 963 aa27.08■■□□□ 1.93
COL9A2-211ENST00000496215 GRIN3BO60391 1043 aa27.07■■□□□ 1.92
COL9A2-211ENST00000496215 DPEP1P16444 411 aa27.07■■□□□ 1.92
COL9A2-211ENST00000496215 EIF4A1P60842 406 aaKnown RBP27.07■■□□□ 1.92
COL9A2-211ENST00000496215 TGFB2P61812 414 aa27.07■■□□□ 1.92
COL9A2-211ENST00000496215 NBPF26B4DH59 902 aa27.06■■□□□ 1.92
COL9A2-211ENST00000496215 KCNA3P22001 575 aa27.06■■□□□ 1.92
COL9A2-211ENST00000496215 NBPF10Q6P3W6 841 aaKnown RBP27.06■■□□□ 1.92
COL9A2-211ENST00000496215 NBPF15Q8N660 670 aa27.06■■□□□ 1.92
COL9A2-211ENST00000496215 ZNF784Q8NCA9 323 aaPredicted RBP27.05■■□□□ 1.92
COL9A2-211ENST00000496215 CAMTA2O94983 1202 aa27.04■■□□□ 1.92
COL9A2-211ENST00000496215 BABAM1Q9NWV8 329 aa27.04■■□□□ 1.92
COL9A2-211ENST00000496215 TRIM35Q9UPQ4 493 aa27.04■■□□□ 1.92
COL9A2-211ENST00000496215 CARMIL3Q8ND23 1372 aa27.04■■□□□ 1.92
COL9A2-211ENST00000496215 GIGYF1O75420 1035 aaPredicted RBP27.03■■□□□ 1.92
COL9A2-211ENST00000496215 CCDC184Q52MB2 194 aa27.03■■□□□ 1.92
COL9A2-211ENST00000496215 TBC1D9BQ66K14 1250 aa27.03■■□□□ 1.92
COL9A2-211ENST00000496215 ANKRD31Q8N7Z5 1873 aa27.02■■□□□ 1.92
COL9A2-211ENST00000496215 DZIP3Q86Y13 1208 aaKnown RBP27.02■■□□□ 1.92
COL9A2-211ENST00000496215 SERPINB2P05120 415 aa27.01■■□□□ 1.91
COL9A2-211ENST00000496215 BICDL1Q6ZP65 573 aa27.01■■□□□ 1.91
COL9A2-211ENST00000496215 MRS2Q9HD23 443 aa27.01■■□□□ 1.91
COL9A2-211ENST00000496215 DLEC1Q9Y238 1755 aa27.01■■□□□ 1.91
COL9A2-211ENST00000496215 ARFGEF1Q9Y6D6 1849 aa27■■□□□ 1.91
COL9A2-211ENST00000496215 CHRNA5P30532 468 aa27■■□□□ 1.91
COL9A2-211ENST00000496215 APAF1O14727 1248 aa26.99■■□□□ 1.91
COL9A2-211ENST00000496215 BCS1LQ9Y276 419 aa26.97■■□□□ 1.91
COL9A2-211ENST00000496215 LAS1LQ9Y4W2 734 aaKnown RBP26.97■■□□□ 1.91
COL9A2-211ENST00000496215 COL11A2P13942 1736 aaPredicted RBP26.96■■□□□ 1.91
COL9A2-211ENST00000496215 ZNF652Q9Y2D9 606 aa26.96■■□□□ 1.91
COL9A2-211ENST00000496215 ADCY9O60503 1353 aa26.96■■□□□ 1.91
COL9A2-211ENST00000496215 ERBB4Q15303 1308 aa26.95■■□□□ 1.91
COL9A2-211ENST00000496215 CHL1O00533 1208 aa26.94■■□□□ 1.9
COL9A2-211ENST00000496215 CALD1Q05682 793 aaKnown RBP26.92■■□□□ 1.9
COL9A2-211ENST00000496215 PRR5LQ6MZQ0 368 aa26.92■■□□□ 1.9
COL9A2-211ENST00000496215 CCDC24Q8N4L8 307 aa26.92■■□□□ 1.9
COL9A2-211ENST00000496215 PIM2Q9P1W9 311 aa26.92■■□□□ 1.9
COL9A2-211ENST00000496215 RGL2O15211 777 aa26.91■■□□□ 1.9
COL9A2-211ENST00000496215 MYL6BP14649 208 aa26.91■■□□□ 1.9
COL9A2-211ENST00000496215 CLEC4GQ6UXB4 293 aa26.91■■□□□ 1.9
COL9A2-211ENST00000496215 CFAP44Q96MT7 982 aa26.91■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms