RNA–Protein interactions for RNA: ENST00000496049.1

GAPDH-210, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 2

Gene GAPDH, Length 390 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-210ENST00000496049 SPINK5Q9NQ38 1064 aaPredicted RBP19.39■□□□□ 0.69
GAPDH-210ENST00000496049 BTBD11A6QL63 1104 aa19.38■□□□□ 0.69
GAPDH-210ENST00000496049 CHL1O00533 1208 aa19.38■□□□□ 0.69
GAPDH-210ENST00000496049 MBIPQ9NS73 344 aa19.38■□□□□ 0.69
GAPDH-210ENST00000496049 ITGB4P16144 1822 aa19.37■□□□□ 0.69
GAPDH-210ENST00000496049 HTRA3P83110 453 aa19.37■□□□□ 0.69
GAPDH-210ENST00000496049 AKT1S1Q96B36 256 aa19.37■□□□□ 0.69
GAPDH-210ENST00000496049 TMOD3Q9NYL9 352 aa19.37■□□□□ 0.69
GAPDH-210ENST00000496049 CT47B1P0C2W7 299 aaPredicted RBP19.35■□□□□ 0.69
GAPDH-210ENST00000496049 TTC5Q8N0Z6 440 aa19.34■□□□□ 0.69
GAPDH-210ENST00000496049 NFATC2IPQ8NCF5 419 aa19.34■□□□□ 0.69
GAPDH-210ENST00000496049 KLRG1Q96E93 195 aa19.34■□□□□ 0.69
GAPDH-210ENST00000496049 WWC3Q9ULE0 1092 aa19.34■□□□□ 0.69
GAPDH-210ENST00000496049 TFCP2L1Q9NZI6 479 aa19.33■□□□□ 0.68
GAPDH-210ENST00000496049 PCNTO95613 3336 aa19.33■□□□□ 0.68
GAPDH-210ENST00000496049 SOS1Q07889 1333 aaPredicted RBP19.32■□□□□ 0.68
GAPDH-210ENST00000496049 EXOSC9Q06265 439 aaKnown RBP19.32■□□□□ 0.68
GAPDH-210ENST00000496049 SYTL4Q96C24 671 aaPredicted RBP19.32■□□□□ 0.68
GAPDH-210ENST00000496049 MIS18AQ9NYP9 233 aa19.32■□□□□ 0.68
GAPDH-210ENST00000496049 UBR2Q8IWV8 1755 aa19.32■□□□□ 0.68
GAPDH-210ENST00000496049 MSL1Q68DK7 614 aa19.31■□□□□ 0.68
GAPDH-210ENST00000496049 JMYQ8N9B5 988 aa19.31■□□□□ 0.68
GAPDH-210ENST00000496049 TOMM70O94826 608 aa19.3■□□□□ 0.68
GAPDH-210ENST00000496049 KCNQ4P56696 695 aa19.3■□□□□ 0.68
GAPDH-210ENST00000496049 ZNF428Q96B54 188 aa19.3■□□□□ 0.68
GAPDH-210ENST00000496049 CHMP4AQ9BY43 222 aa19.3■□□□□ 0.68
GAPDH-210ENST00000496049 RCAN3Q9UKA8 241 aa19.3■□□□□ 0.68
GAPDH-210ENST00000496049 MSH5O43196 834 aa19.29■□□□□ 0.68
GAPDH-210ENST00000496049 TWISTNBQ3B726 338 aaPredicted RBP19.29■□□□□ 0.68
GAPDH-210ENST00000496049 ZNF790Q6PG37 636 aa19.29■□□□□ 0.68
GAPDH-210ENST00000496049 PRIM1P49642 420 aaKnown RBP19.28■□□□□ 0.68
GAPDH-210ENST00000496049 LAMB4A4D0S4 1761 aa19.28■□□□□ 0.68
GAPDH-210ENST00000496049 HOXB7P09629 217 aa19.27■□□□□ 0.68
GAPDH-210ENST00000496049 EIF4A1P60842 406 aaKnown RBP19.27■□□□□ 0.68
GAPDH-210ENST00000496049 FMNL2Q96PY5 1086 aa19.27■□□□□ 0.68
GAPDH-210ENST00000496049 PIGBQ92521 554 aa19.26■□□□□ 0.67
GAPDH-210ENST00000496049 KCPQ6ZWJ8 1503 aa19.25■□□□□ 0.67
GAPDH-210ENST00000496049 SLC39A6Q13433 755 aa19.25■□□□□ 0.67
GAPDH-210ENST00000496049 C8orf58Q8NAV2 365 aa19.24■□□□□ 0.67
GAPDH-210ENST00000496049 SMARCC1Q92922 1105 aaPredicted RBP19.24■□□□□ 0.67
GAPDH-210ENST00000496049 C5P01031 1676 aa19.24■□□□□ 0.67
GAPDH-210ENST00000496049 ELL2O00472 640 aaPredicted RBP19.23■□□□□ 0.67
GAPDH-210ENST00000496049 SLC27A3Q5K4L6 730 aa19.23■□□□□ 0.67
GAPDH-210ENST00000496049 CD2APQ9Y5K6 639 aa19.23■□□□□ 0.67
GAPDH-210ENST00000496049 KCNQ3O43525 872 aa19.22■□□□□ 0.67
GAPDH-210ENST00000496049 ALDH1L2Q3SY69 923 aa19.22■□□□□ 0.67
GAPDH-210ENST00000496049 TSPYL6Q8N831 410 aa19.22■□□□□ 0.67
GAPDH-210ENST00000496049 NMRK2Q9NPI5 230 aa19.22■□□□□ 0.67
GAPDH-210ENST00000496049 SMC4Q9NTJ3 1288 aa19.22■□□□□ 0.67
GAPDH-210ENST00000496049 HEG1Q9ULI3 1381 aa19.21■□□□□ 0.67
GAPDH-210ENST00000496049 LY75O60449 1722 aa19.21■□□□□ 0.67
GAPDH-210ENST00000496049 VAMP4O75379 141 aa19.21■□□□□ 0.67
GAPDH-210ENST00000496049 SNRPA1P09661 255 aaKnown RBP19.21■□□□□ 0.67
GAPDH-210ENST00000496049 KRT24Q2M2I5 525 aa19.21■□□□□ 0.67
GAPDH-210ENST00000496049 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.21■□□□□ 0.67
GAPDH-210ENST00000496049 ZNF496Q96IT1 587 aaPredicted RBP19.21■□□□□ 0.67
GAPDH-210ENST00000496049 STK31Q9BXU1 1019 aa19.21■□□□□ 0.67
GAPDH-210ENST00000496049 ATG3Q9NT62 314 aa19.21■□□□□ 0.67
GAPDH-210ENST00000496049 PALLDQ8WX93 1383 aa19.2■□□□□ 0.66
GAPDH-210ENST00000496049 CANXP27824 592 aaKnown RBP19.2■□□□□ 0.66
GAPDH-210ENST00000496049 RARSP54136 660 aaKnown RBP19.2■□□□□ 0.66
GAPDH-210ENST00000496049 HDGFL1Q5TGJ6 251 aa19.2■□□□□ 0.66
GAPDH-210ENST00000496049 CCDC30Q5VVM6 783 aa19.2■□□□□ 0.66
GAPDH-210ENST00000496049 COL23A1Q86Y22 540 aaPredicted RBP19.2■□□□□ 0.66
GAPDH-210ENST00000496049 PCDH10Q9P2E7 1040 aa19.2■□□□□ 0.66
GAPDH-210ENST00000496049 ASAP1Q9ULH1 1129 aa19.2■□□□□ 0.66
GAPDH-210ENST00000496049 CICQ96RK0 1608 aaPredicted RBP19.2■□□□□ 0.66
GAPDH-210ENST00000496049 KIF16BQ96L93 1317 aa19.2■□□□□ 0.66
GAPDH-210ENST00000496049 PTCD1O75127 700 aaKnown RBP19.19■□□□□ 0.66
GAPDH-210ENST00000496049 VSIG10Q8N0Z9 540 aa19.19■□□□□ 0.66
GAPDH-210ENST00000496049 ZNF831Q5JPB2 1677 aa19.19■□□□□ 0.66
GAPDH-210ENST00000496049 HSPA1AP0DMV8 641 aaKnown RBP19.18■□□□□ 0.66
GAPDH-210ENST00000496049 HSPA1BP0DMV9 641 aaKnown RBP19.18■□□□□ 0.66
GAPDH-210ENST00000496049 RBM42Q9BTD8 480 aaKnown RBP19.18■□□□□ 0.66
GAPDH-210ENST00000496049 CACNA1FO60840 1977 aa19.18■□□□□ 0.66
GAPDH-210ENST00000496049 TEX13AQ9BXU3 409 aaPredicted RBP19.17■□□□□ 0.66
GAPDH-210ENST00000496049 TJP1Q07157 1748 aa19.17■□□□□ 0.66
GAPDH-210ENST00000496049 NEFLP07196 543 aa19.16■□□□□ 0.66
GAPDH-210ENST00000496049 RBM46Q8TBY0 533 aaKnown RBP19.16■□□□□ 0.66
GAPDH-210ENST00000496049 SSH1Q8WYL5 1049 aa19.16■□□□□ 0.66
GAPDH-210ENST00000496049 BCL2L13Q9BXK5 485 aa19.16■□□□□ 0.66
GAPDH-210ENST00000496049 SUPT16HQ9Y5B9 1047 aaKnown RBP19.16■□□□□ 0.66
GAPDH-210ENST00000496049 EIF2S2P20042 333 aaKnown RBP19.15■□□□□ 0.66
GAPDH-210ENST00000496049 RRP1P56182 461 aaKnown RBP19.15■□□□□ 0.66
GAPDH-210ENST00000496049 C16orf71Q8IYS4 520 aaPredicted RBP19.14■□□□□ 0.65
GAPDH-210ENST00000496049 ERBB4Q15303 1308 aa19.14■□□□□ 0.65
GAPDH-210ENST00000496049 IPO8O15397 1037 aaKnown RBP19.13■□□□□ 0.65
GAPDH-210ENST00000496049 BCAR3O75815 825 aa19.13■□□□□ 0.65
GAPDH-210ENST00000496049 STARD3NLO95772 234 aa19.13■□□□□ 0.65
GAPDH-210ENST00000496049 NECTIN2Q92692 538 aa19.13■□□□□ 0.65
GAPDH-210ENST00000496049 DBF4Q9UBU7 674 aaPredicted RBP19.13■□□□□ 0.65
GAPDH-210ENST00000496049 LOC102724428A0A0B4J2F2 783 aa19.12■□□□□ 0.65
GAPDH-210ENST00000496049 HMGB2P26583 209 aaKnown RBP19.12■□□□□ 0.65
GAPDH-210ENST00000496049 BRPF1P55201 1214 aaPredicted RBP19.12■□□□□ 0.65
GAPDH-210ENST00000496049 SIK1P57059 783 aa19.12■□□□□ 0.65
GAPDH-210ENST00000496049 FRAT1Q92837 279 aaPredicted RBP19.12■□□□□ 0.65
GAPDH-210ENST00000496049 COL5A3P25940 1745 aaPredicted RBP19.11■□□□□ 0.65
GAPDH-210ENST00000496049 RNF123Q5XPI4 1314 aa19.11■□□□□ 0.65
GAPDH-210ENST00000496049 MS4A1P11836 297 aa19.11■□□□□ 0.65
GAPDH-210ENST00000496049 MRPL50Q8N5N7 158 aaKnown RBP19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms